Factsheet for TraesCS3A01G199100.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G199400.2	Wheat	cytosol	97.97	98.11
TraesCS3B01G232300.2	Wheat	cytosol	96.95	97.23
HORVU3Hr1G045890.2	Barley	endoplasmic reticulum, peroxisome, plasma membrane	82.44	86.85
Os01t0329800-01	Rice	cytosol	66.47	64.69
Zm00001d034996_P005	Maize	cytosol	60.23	60.32
KXG24185	Sorghum	nucleus	62.84	59.07
Zm00001d049729_P008	Maize	cytosol	61.25	58.61
TraesCS1A01G105700.1	Wheat	cytosol	40.93	40.17
KRH36908	Soybean	cytosol	22.5	34.91
CDX93645	Canola	nucleus	24.82	27.94
Bra018708.1-P	Field mustard	nucleus	24.53	27.8
CDY43306	Canola	cytosol	24.67	27.73
AT3G17330.1	Thale cress	nucleus	23.22	26.89
Solyc12g099090.1.1	Tomato	cytosol	26.71	26.67
VIT_05s0020g00460.t01	Wine grape	cytosol	27.58	26.61
KRH02430	Soybean	cytosol	26.56	26.37
AT1G48110.2	Thale cress	nucleus	24.38	26.29
TraesCS5A01G431200.1	Wheat	nucleus	22.21	25.98
PGSC0003DMT400011739	Potato	cytosol	25.98	25.61
KRH50636	Soybean	cytosol	25.25	25.04
KRH11876	Soybean	endoplasmic reticulum	24.53	24.11
TraesCS5A01G386600.2	Wheat	nucleus	22.79	23.68
TraesCS5A01G431100.1	Wheat	cytosol	21.48	23.05
TraesCS7A01G276800.3	Wheat	nucleus	20.9	23.04
TraesCS3A01G267700.1	Wheat	nucleus	22.79	22.72
TraesCS4A01G031600.2	Wheat	cytosol	23.8	22.5
TraesCS7A01G291700.1	Wheat	cytosol	19.16	22.37
TraesCS1A01G044500.1	Wheat	nucleus	20.75	22.27
TraesCS4A01G125600.3	Wheat	cytosol, nucleus, plastid	23.22	22.25
TraesCS2A01G011400.1	Wheat	nucleus	19.74	19.13

Protein Annotations

EnsemblPlants:TraesCS3A01G199100.2	EnsemblPlantsGene:TraesCS3A01G199100	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357	PANTHER:PTHR12357:SF26	PFAM:PF04146
PFscan:PS50882	SEG:seg	MapMan:16.5.2.1	:	:	:

Description

No Description!

Coordinates

chr3A:-:323099972..323103484

Molecular Weight (calculated)

75867.4 Da

IEP (calculated)

7.142

GRAVY (calculated)

-0.495

Length

689 amino acids

Sequence
(BLAST)

001: MEMAPELLYG QNVYVPTAVN SYTYGYAEVG SPMDWYNHQN SLGYDAQDVY FPAFQTDGTQ CVYYATPDNG SVHPSYSPYP MDPGYIVDGS YLPQEYVPDA
101: DPTCQVVPSS YYIPSVLPYA VDSVLGITAT SLHPSSVAFI PSMPAYAVTS TNHVLPSMAL VAPKNDVVVN PPVQSTIVSS KQFQNHSMMP IVQLHNSLPM
201: KQELGNGSMV PVKPLHTPQA PTNVLDSPMA AAKHSPKAKL SGNDCFACVG SDPQKWASAE KFQPTSKSSG QLKAHGSSNA EKHSGQRSPA IVAKSYTSRL
301: IVGNSDGTII IRPDQYNGND LRVDNPYAKF FVIKSIGEAD IHKSIKYGVW SSSSSGNSKL DCAYRDADRI AKRNSTKCPV FLFFSVNGSG HFCGLAEMVG
401: PVDFHKDMDF WCQDKWTGCF PVRWHIIKDV PNYTLQNILL QNNENKPVTH SRDTQEVPYV PGISVLKILK DIKVKECLFD DFMRYEEDEA RIKQCRWSKL
501: SHNAPDFVPV SQRKSDASDL QMPKFGGVLI DRTLEIQNMS EKPHDCNGIK QQDAVEKQVG SEAGKENGHQ ENRFYGKQDN EKAPRSSTSQ PQTSTLKMSM
601: DGKQQYWKKV ENPKPNPDGA GHGSSKLREN GVNISSAIVR LEAPEDDSIV AKVGSLTISS KTRKAEDKSP LVDVVTIGSL PIRVNKSVA

Best Arabidopsis Sequence Match ( AT1G48110.1 )
(BLAST)

001: MYTSEAAPDF VVDQGMYYPV DASYGYYCTG YESPGDWENH QMFFGVDGSE VQYTGGQNEN SPYICYTPSY GYAQSPYNPF NPYIPGASIG VDSAFVAPQQ
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK

Arabidopsis Description

ECT7evolutionarily conserved C-terminal region 7 [Source:TAIR;Acc:AT1G48110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.