Factsheet for Zm00001d034996_P005

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24185	Sorghum	nucleus	85.9	80.63
Zm00001d049729_P008	Maize	cytosol	83.87	80.14
TraesCS3A01G199100.2	Wheat	cytosol	60.32	60.23
TraesCS3D01G199400.2	Wheat	cytosol	60.03	60.03
TraesCS3B01G232300.2	Wheat	cytosol	59.45	59.53
HORVU3Hr1G045890.2	Barley	endoplasmic reticulum, peroxisome, plasma membrane	55.38	58.26
Os01t0329800-01	Rice	cytosol	58.14	56.5
Zm00001d002008_P001	Maize	cytosol	5.81	54.79
Zm00001d010826_P001	Maize	cytosol	23.4	38.89
KRH36908	Soybean	cytosol	21.95	34.01
Bra018708.1-P	Field mustard	nucleus	23.98	27.14
CDX93645	Canola	nucleus	24.13	27.12
CDY43306	Canola	cytosol	23.84	26.75
Zm00001d008913_P001	Maize	cytosol, nucleus, peroxisome	15.26	26.32
AT3G17330.1	Thale cress	nucleus	22.67	26.22
AT1G48110.2	Thale cress	nucleus	24.27	26.13
KRH02430	Soybean	cytosol	26.16	25.94
KRH50636	Soybean	cytosol	25.73	25.47
VIT_05s0020g00460.t01	Wine grape	cytosol	26.16	25.21
Solyc12g099090.1.1	Tomato	cytosol	24.71	24.64
PGSC0003DMT400011739	Potato	cytosol	24.71	24.32
KRH11876	Soybean	endoplasmic reticulum	24.56	24.11
Zm00001d034005_P003	Maize	plasma membrane	22.53	23.48
Zm00001d031981_P002	Maize	cytosol	22.09	23.35
Zm00001d024339_P001	Maize	extracellular	19.91	23.14
Zm00001d002372_P002	Maize	nucleus	18.46	23.01
Zm00001d011602_P001	Maize	nucleus	20.06	22.66
Zm00001d049360_P004	Maize	extracellular	19.62	22.65
Zm00001d047072_P001	Maize	mitochondrion	15.99	22.49
Zm00001d007890_P002	Maize	mitochondrion	19.91	20.98
Zm00001d043860_P001	Maize	mitochondrion	20.06	20.44
Zm00001d018896_P002	Maize	mitochondrion	20.35	19.83
Zm00001d048424_P003	Maize	plastid	21.22	19.73
Zm00001d027731_P012	Maize	plastid	21.51	18.43
Zm00001d051781_P001	Maize	cytosol, extracellular	6.54	17.93
Zm00001d038120_P001	Maize	cytosol	5.96	17.6
Zm00001d032562_P001	Maize	cytosol	6.69	16.61
Zm00001d048501_P002	Maize	cytosol	17.01	15.44

Protein Annotations

EntrezGene:100383436	MapMan:16.5.2.1	Gene3D:3.10.590.10	ProteinID:AQK78042.1	ProteinID:AQK78044.1	ProteinID:AQK78045.1
ProteinID:AQK78047.1	ProteinID:AQK78048.1	ProteinID:AQK78050.1	EMBL:BT067221	UniProt:C0PG02	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	PFAM:PF04146	PFscan:PS50882
PANTHER:PTHR12357	PANTHER:PTHR12357:SF26	UniParc:UPI000195CBC6	InterPro:YTH_domain	EnsemblPlantsGene:Zm00001d034996	EnsemblPlants:Zm00001d034996_P005
EnsemblPlants:Zm00001d034996_T005	SEG:seg	:	:	:	:

Description

evolutionarily conserved C-terminal region 7

Coordinates

chr6:+:1302166..1309663

Molecular Weight (calculated)

75207.9 Da

IEP (calculated)

6.886

GRAVY (calculated)

-0.565

Length

688 amino acids

Sequence
(BLAST)

001: MEMGMTPDVM YGQNVFVPAT ATPYQYGYAE VGSQMEWCNQ SSSLGYDGQD NFYPTEGMQC VYYAAPDNGS VHPTYSSYPS DPSFVPDGSF MPQEYVADPA
101: NSTCQIAQTS YYIPAVLPYA QDSALGSATT HLHSNSNVAF LPGIPGYAAT SANAAFPLIA PVTTKSDIVM HPHVQSTIVP SKQFQDYAKP PKVQLHNSVP
201: QKQELPDRCM IPAKLPHASQ VSAHLSGNNC LGCAAGSDLR KWAAAEKFQP SSKSSGHLNA TGQKAHSLVD SEKPSNQRPA IIVKSHTTRL PVGNPDGTIV
301: IRTDQYNRDD LRLDYMYAKF FVIKSIGEAD VHKSIKYGVW SSSSSGNSKL DSAFRDADRI SRRHSTKCPV FLFFSVNGSG HFCGMAEMVG PVDFHKDMDF
401: WCQDKWTGCF PVRWHIVKDI PNGSLQHITL QNNENKPVTH SRDTQEVPYL PGMSVINIFK DIKVRYCLFD DFMSYEAEEA QKRAHRRCKL SSNAPDFVPV
501: SQRTKDESGT EQRESRSVLV DRTSGIQNAA EKPHDTKVIK PQDPCVSEEQ ASEAEKENGP QGCRCSGNQG QEEAAKTATN HPPASGLKAA GAEGKQQQQR
601: WKKVENPKQH ADSVPAQCSQ EEAPEKRLNG VSGCSSAVQE GCEEQRAAAK LASLKIGSRA AVEADRKTSA VGVVTIGSMP VRVDCCDV

Best Arabidopsis Sequence Match ( AT1G48110.1 )
(BLAST)

001: MYTSEAAPDF VVDQGMYYPV DASYGYYCTG YESPGDWENH QMFFGVDGSE VQYTGGQNEN SPYICYTPSY GYAQSPYNPF NPYIPGASIG VDSAFVAPQQ
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK

Arabidopsis Description

ECT7evolutionarily conserved C-terminal region 7 [Source:TAIR;Acc:AT1G48110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.