Factsheet for Zm00001d049360_P004

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
cytosol 1
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002008_P001	Maize	cytosol	11.74	95.89
EES14722	Sorghum	nucleus	90.77	91.08
Zm00001d024339_P001	Maize	extracellular	87.75	88.34
Os08t0224200-01	Rice	mitochondrion	76.51	73.67
TraesCS7A01G291700.1	Wheat	cytosol	71.31	72.03
HORVU7Hr1G069070.2	Barley	cytosol	70.97	71.69
TraesCS7B01G182100.2	Wheat	cytosol	70.81	71.28
TraesCS7D01G285000.1	Wheat	endoplasmic reticulum	68.79	66.99
Zm00001d008913_P001	Maize	cytosol, nucleus, peroxisome	36.74	54.89
CDY51902	Canola	cytosol	13.76	52.9
Zm00001d047072_P001	Maize	mitochondrion	36.58	44.58
Zm00001d002372_P002	Maize	nucleus	40.94	44.2
VIT_09s0054g01600.t01	Wine grape	nucleus	46.81	41.89
Bra034710.1-P	Field mustard	nucleus	41.44	41.58
KRH46969	Soybean	endoplasmic reticulum, extracellular	44.46	40.96
CDY23562	Canola	nucleus	42.45	40.81
Bra039366.1-P	Field mustard	nucleus	41.11	40.77
CDY44025	Canola	nucleus	42.45	40.68
KRH44697	Soybean	mitochondrion	44.63	40.43
AT3G13060.2	Thale cress	nucleus	42.79	40.22
Zm00001d031981_P002	Maize	cytosol	43.79	40.09
CDY43378	Canola	nucleus	41.28	40.07
CDY24224	Canola	nucleus	41.28	40.07
VIT_01s0010g03690.t01	Wine grape	cytosol	37.42	38.99
GSMUA_Achr1P10560_001	Banana	nucleus	28.69	38.43
AT5G58190.2	Thale cress	nucleus	30.87	34.85
Bra006780.1-P	Field mustard	cytosol	29.53	34.58
CDX88661	Canola	nucleus	29.36	34.31
CDY32718	Canola	nucleus	30.2	34.03
Solyc05g032850.2.1	Tomato	nucleus	34.4	33.94
CDY02802	Canola	nucleus	30.2	33.71
CDY58572	Canola	nucleus	28.52	33.53
Bra020382.1-P	Field mustard	nucleus	30.37	32.73
VIT_11s0065g00160.t01	Wine grape	nucleus	39.09	31.7
Zm00001d034005_P003	Maize	plasma membrane	32.89	29.7
CDY67303	Canola	nucleus	25.34	28.98
Bra010911.1-P	Field mustard	nucleus	25.34	28.98
CDX90116	Canola	nucleus	25.34	28.98
AT1G27960.1	Thale cress	cytosol	26.01	28.76
Zm00001d011602_P001	Maize	nucleus	28.52	27.91
CDY11758	Canola	nucleus, plastid	25.84	27.8
Zm00001d048424_P003	Maize	plastid	32.05	25.81
Zm00001d007890_P002	Maize	mitochondrion	28.19	25.73
Zm00001d038120_P001	Maize	cytosol	9.73	24.89
Zm00001d043860_P001	Maize	mitochondrion	27.68	24.44
Zm00001d018896_P002	Maize	mitochondrion	28.69	24.22
Zm00001d027731_P012	Maize	plastid	31.88	23.66
Zm00001d051781_P001	Maize	cytosol, extracellular	9.9	23.51
Zm00001d032562_P001	Maize	cytosol	10.74	23.1
Zm00001d034996_P005	Maize	cytosol	22.65	19.62
Zm00001d048501_P002	Maize	cytosol	24.83	19.53
Zm00001d010826_P001	Maize	cytosol	13.09	18.84
Zm00001d049729_P008	Maize	cytosol	22.15	18.33

Protein Annotations

EnsemblPlants:Zm00001d049360_P004	EnsemblPlants:Zm00001d049360_T004	EnsemblPlantsGene:Zm00001d049360	EntrezGene:100382673	Gene3D:3.10.590.10	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357
PANTHER:PTHR12357:SF64	PFAM:PF04146	PFscan:PS50882	ProteinID:AQK50100.1	SignalP:SignalP-noTM	UniParc:UPI000843B354
UniProt:A0A1D6PTZ6	MapMan:16.5.2.1	:	:	:	:

Description

evolutionarily conserved C-terminal region 10

Coordinates

chr4:+:27875266..27878962

Molecular Weight (calculated)

65675.9 Da

IEP (calculated)

5.756

GRAVY (calculated)

-0.723

Length

596 amino acids

Sequence
(BLAST)

001: MLLPTYLSIF MFFVDSTAPL QTGPVLENNP SKSANAKDQI LSGTENVTTG NARGASSLRS PNGPPEKASS VGKAGEQPYL YQQNVYAPQP QPLYPGGYMN
101: PSGQWEEYPH YVNMEGLHSV SPGIYNDNQS LMLSAGYANN PQMMYGAYSP VSTAGDGQQY FPVHYSFSNP YYQPPASPSM GYSNSATGMS QGDPMLQQEY
201: FLPDGLLYSP TPGYHQPFSS FDRALTQPNN APGLFGQGSL PLASGMHHGS MYGPGSYKGR QYGSKFGGTT PSWSSAGRRF GTFDLSGNQQ RGSMSFGSHN
301: GSLEFMNEQN RGPRATKPKI QDTENSGDEK SEKTVPLIDS ELYNRSDFIT EYKDAKFFVI KSYTEDHVHR SIKYNVWAST ASGNRKLDSA YRAAREKEEH
401: CPIFLFFSVN GSGQFCGVAE MIGPVDFDRS VNYWQQDKWS GQFPVKWHII KDVPNNLLRH IILENNDNKP VTNSRDTQEV KLEQGLQMLT IFKSHEAETT
501: IVEDFDFYEQ REKALQENRR QQHAASTDTQ KLVDTKAQDA VADISDAFAK AVQLKNTENS GTTPKTEGAS AEKGSAATAK VEGSANLNTG PVEESS

Best Arabidopsis Sequence Match ( AT3G13060.1 )
(BLAST)

001: MATTQSHTSD LTSEEQPASL DIMKEQTVPA NNETSASFKS SQEAPVVVHP AKVAPLTGPY GLAGDFAGHL PSSILSPQAQ GFYYRGYENP TGEWDEYSSY
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVSSNLCLS SFLVHKIPLL SHTITTTKNY R

Arabidopsis Description

ECT5Evolutionarily conserved C-terminal region 5 [Source:UniProtKB/TrEMBL;Acc:Q0WR25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.