Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67303 | Canola | nucleus | 85.2 | 90.59 |
| CDX90116 | Canola | nucleus | 85.2 | 90.59 |
| AT1G27960.1 | Thale cress | cytosol | 68.23 | 70.13 |
| Zm00001d002008_P001 | Maize | cytosol | 9.21 | 69.86 |
| CDY51902 | Canola | cytosol | 14.08 | 50.32 |
| CDY57677 | Canola | mitochondrion | 13.36 | 43.27 |
| CDY69959 | Canola | nucleus | 24.55 | 34.09 |
| CDY50867 | Canola | nucleus | 24.55 | 34.0 |
| CDY42891 | Canola | nucleus | 24.55 | 34.0 |
| CDY50448 | Canola | cytosol | 15.52 | 33.73 |
| CDX91541 | Canola | mitochondrion | 9.75 | 33.13 |
| CDY21154 | Canola | nucleus | 24.19 | 32.92 |
| CDY39299 | Canola | nucleus | 24.91 | 32.62 |
| CDY07437 | Canola | nucleus | 24.73 | 32.54 |
| CDY05744 | Canola | cytosol | 7.4 | 32.54 |
| CDY29972 | Canola | nucleus | 23.65 | 31.95 |
| GSMUA_Achr1P10560_001 | Banana | nucleus | 25.27 | 31.46 |
| VIT_01s0010g03690.t01 | Wine grape | cytosol | 32.13 | 31.12 |
| GSMUA_Achr4P12480_001 | Banana | cytosol | 32.49 | 30.98 |
| CDY23562 | Canola | nucleus | 34.66 | 30.97 |
| CDY44025 | Canola | nucleus | 34.66 | 30.87 |
| CDY52966 | Canola | cytosol | 24.73 | 30.58 |
| CDY56132 | Canola | nucleus | 24.55 | 30.43 |
| Os08t0556000-01 | Rice | nucleus | 33.75 | 29.97 |
| CDY24224 | Canola | nucleus | 33.21 | 29.97 |
| CDY43378 | Canola | nucleus | 33.03 | 29.8 |
| CDX88524 | Canola | cytosol | 23.65 | 29.64 |
| CDX87395 | Canola | cytosol | 23.29 | 29.05 |
| GSMUA_Achr4P11560_001 | Banana | nucleus | 33.75 | 28.81 |
| KXG25412 | Sorghum | cytosol | 33.03 | 28.64 |
| Zm00001d008913_P001 | Maize | cytosol, nucleus, peroxisome | 20.58 | 28.57 |
| CDY56809 | Canola | cytosol | 22.74 | 28.12 |
| CDY22270 | Canola | cytosol | 22.74 | 28.12 |
| TraesCS7B01G174500.1 | Wheat | nucleus | 30.32 | 28.05 |
| TraesCS1D01G045100.1 | Wheat | nucleus | 32.31 | 27.88 |
| TraesCS1B01G057800.3 | Wheat | nucleus | 32.31 | 27.88 |
| TraesCS1A01G044500.1 | Wheat | nucleus | 32.31 | 27.88 |
| TraesCS7D01G276800.4 | Wheat | nucleus | 31.41 | 27.84 |
| TraesCS7A01G276800.3 | Wheat | nucleus | 31.41 | 27.84 |
| HORVU1Hr1G008330.2 | Barley | nucleus | 31.95 | 27.57 |
| Zm00001d031981_P002 | Maize | cytosol | 32.31 | 27.5 |
| CDY02802 | Canola | nucleus | 26.17 | 27.15 |
| Os04t0608800-01 | Rice | nucleus | 27.62 | 26.94 |
| EES14722 | Sorghum | nucleus | 28.88 | 26.94 |
| KXG27074 | Sorghum | cytosol | 26.71 | 26.81 |
| CDY32718 | Canola | nucleus | 25.45 | 26.65 |
| Zm00001d002372_P002 | Maize | nucleus | 26.35 | 26.45 |
| CDX79309 | Canola | nucleus | 24.19 | 26.33 |
| Zm00001d024339_P001 | Maize | extracellular | 27.8 | 26.01 |
| CDX68000 | Canola | nucleus | 23.83 | 25.93 |
| Zm00001d049360_P004 | Maize | extracellular | 27.8 | 25.84 |
| CDY23602 | Canola | nucleus | 29.06 | 25.8 |
| TraesCS7B01G182100.2 | Wheat | cytosol | 27.44 | 25.68 |
| CDY58572 | Canola | nucleus | 23.47 | 25.64 |
| TraesCS7A01G291700.1 | Wheat | cytosol | 27.26 | 25.59 |
| CDX75712 | Canola | nucleus | 29.06 | 25.39 |
| CDX94944 | Canola | nucleus | 22.74 | 25.35 |
| CDY24182 | Canola | nucleus | 24.73 | 25.32 |
| CDX88661 | Canola | nucleus | 23.29 | 25.29 |
| CDX82538 | Canola | nucleus | 29.06 | 25.16 |
| CDY43989 | Canola | nucleus | 28.7 | 25.08 |
| CDX93476 | Canola | nucleus | 22.56 | 25.0 |
| Os08t0224200-01 | Rice | mitochondrion | 27.8 | 24.88 |
| HORVU7Hr1G069070.2 | Barley | cytosol | 26.35 | 24.75 |
| TraesCS7D01G285000.1 | Wheat | endoplasmic reticulum | 27.26 | 24.67 |
| HORVU7Hr1G058250.46 | Barley | cytosol, plastid | 20.94 | 24.47 |
| GSMUA_Achr4P04600_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 33.94 | 24.38 |
| CDY07089 | Canola | nucleus | 27.98 | 24.37 |
| CDY43306 | Canola | cytosol | 26.53 | 23.98 |
| Zm00001d047072_P001 | Maize | mitochondrion | 20.94 | 23.72 |
| CDX93645 | Canola | nucleus | 26.17 | 23.69 |
| CDY60520 | Canola | cytosol | 4.51 | 18.94 |
Protein Annotations
| EnsemblPlants:CDY11758 | EnsemblPlantsGene:GSBRNA2T00049977001 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | ncoils:Coil | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF56 |
| PFAM:PF04146 | PFscan:PS50882 | ProteinID:CDY11758 | ProteinID:CDY11758.1 | SEG:seg | UniParc:UPI0004EE4BED |
| UniProt:A0A078FI46 | MapMan:16.5.2.1 | : | : | : | : |
Description
BnaC03g58200DBnaC03g58200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FI46]
Coordinates
chrLK032014:+:127822..131129
Molecular Weight (calculated)
62541.3 Da
IEP (calculated)
7.039
GRAVY (calculated)
-0.729
Length
554 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASNRSTNC SPSTGPVNMV ERLSTDKTVL QHQDTNSSSS RPLCGTTGNA AFSASSSGFH TDSSHIGGYE NAADTPRSYH PHTDILSFEE VYPGMRYDNM
101: FYHGNGVPSD SPRKQSLPQH YGDLYADDAN YFAPFRSSNQ QYPLPEPLNA SPEFHISQTN STHPYRHGNE INSFETDYMM RSTRNFGLRD NIFGKPKGLN
201: LNPFTGRRTF LPMASATRSM KHPVSADLSA NDFDMGSPHR TLHDDFGSSA SLSYREQAYN QCRRASFSAS SSSSPSSTWE RDYNLSPSDE PRSGSCSDFY
301: HRPAMSDLLT ERNRGLRASR PNAKSKMITY DQQDLLSKFR DAKFFVIKSY SEDNVYKSMK YCVWASTKNG NKKLDAAYRE AKTKEVACSV FLLFSVNASA
401: QFCGVAEMVG PVDFETSVEY WQQDRWSGHF PVKWVIVKDV PNSLFRHIII EDNDNKPVTN SRDTQEVGVE QGIEMINIFN SCEMKSSILD DFSFYEERQR
501: IQDRKARQRA LLENLRASSL TSVPTHLASS LHEDYVREMS KSFAEALALQ HKLN
101: FYHGNGVPSD SPRKQSLPQH YGDLYADDAN YFAPFRSSNQ QYPLPEPLNA SPEFHISQTN STHPYRHGNE INSFETDYMM RSTRNFGLRD NIFGKPKGLN
201: LNPFTGRRTF LPMASATRSM KHPVSADLSA NDFDMGSPHR TLHDDFGSSA SLSYREQAYN QCRRASFSAS SSSSPSSTWE RDYNLSPSDE PRSGSCSDFY
301: HRPAMSDLLT ERNRGLRASR PNAKSKMITY DQQDLLSKFR DAKFFVIKSY SEDNVYKSMK YCVWASTKNG NKKLDAAYRE AKTKEVACSV FLLFSVNASA
401: QFCGVAEMVG PVDFETSVEY WQQDRWSGHF PVKWVIVKDV PNSLFRHIII EDNDNKPVTN SRDTQEVGVE QGIEMINIFN SCEMKSSILD DFSFYEERQR
501: IQDRKARQRA LLENLRASSL TSVPTHLASS LHEDYVREMS KSFAEALALQ HKLN
001: MAASYRSTDW FPPTTTTGSF TGLNTDQSVL QDQDIVSSRP FCGQGTESFH IGADTPRSNH SHSDVPSFDK VSPGMINEMF YHSNGVPSDF QRSSLSTRNQ
101: SSLQHYGDLY ADDSRYFVPF HLSNQQYPTP EDIHLSPEFH MFQANSRHFD RHVNERNSSE IDNMMRARGN SVLRDNIYGE PRGMNLNPFS GENMFPPLAS
201: TRPCMRHLGS AELLANDFNM GPAHGGLHDA FESAANLSYR EQAYAQCKRS PFSASSSSPT WENDYNLPPL DEARSESYND FSHCPAMLDM LTESNRGPRA
301: SRLNSKSKMI SYDRVDRFCQ QELLSQFRDA KFFVIKSYSE DNVHKSIKHC VWASTKNGNK KLDAAYREAK KKDVACPVFL LFSVNASSQF CGVAEMVGPV
401: DFNTSVEYWQ QDRWSGHFPV QWLIVKDVPN SLFRHIIIES NDNKPVTNSR DTQEVGLEKG IEMLDIFISC EMRSSILDDF NFYEERQIAI QDRKARQRAV
501: LESLALSATS APTYSLHDDF VREMSKHFAE ALALQHRPK
101: SSLQHYGDLY ADDSRYFVPF HLSNQQYPTP EDIHLSPEFH MFQANSRHFD RHVNERNSSE IDNMMRARGN SVLRDNIYGE PRGMNLNPFS GENMFPPLAS
201: TRPCMRHLGS AELLANDFNM GPAHGGLHDA FESAANLSYR EQAYAQCKRS PFSASSSSPT WENDYNLPPL DEARSESYND FSHCPAMLDM LTESNRGPRA
301: SRLNSKSKMI SYDRVDRFCQ QELLSQFRDA KFFVIKSYSE DNVHKSIKHC VWASTKNGNK KLDAAYREAK KKDVACPVFL LFSVNASSQF CGVAEMVGPV
401: DFNTSVEYWQ QDRWSGHFPV QWLIVKDVPN SLFRHIIIES NDNKPVTNSR DTQEVGLEKG IEMLDIFISC EMRSSILDDF NFYEERQIAI QDRKARQRAV
501: LESLALSATS APTYSLHDDF VREMSKHFAE ALALQHRPK
Arabidopsis Description
ECT9At1g27960 [Source:UniProtKB/TrEMBL;Acc:Q500V8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.