Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60520 | Canola | cytosol | 23.81 | 22.73 |
| CDY51902 | Canola | cytosol | 26.19 | 21.29 |
| Zm00001d038120_P001 | Maize | cytosol | 31.75 | 17.17 |
| Zm00001d051781_P001 | Maize | cytosol, extracellular | 31.75 | 15.94 |
| Zm00001d032562_P001 | Maize | cytosol | 33.33 | 15.16 |
| CDY57677 | Canola | mitochondrion | 17.46 | 12.87 |
| CDY69959 | Canola | nucleus | 38.1 | 12.03 |
| CDY29972 | Canola | nucleus | 38.89 | 11.95 |
| CDY21154 | Canola | nucleus | 38.1 | 11.79 |
| CDY50867 | Canola | nucleus | 37.3 | 11.75 |
| CDY42891 | Canola | nucleus | 37.3 | 11.75 |
| CDY07437 | Canola | nucleus | 35.71 | 10.69 |
| CDY39299 | Canola | nucleus | 35.71 | 10.64 |
| CDY23602 | Canola | nucleus | 50.0 | 10.1 |
| CDX75712 | Canola | nucleus | 50.79 | 10.09 |
| CDY56132 | Canola | nucleus | 35.71 | 10.07 |
| CDY52966 | Canola | cytosol | 35.71 | 10.04 |
| CDY43989 | Canola | nucleus | 50.0 | 9.94 |
| CDX91541 | Canola | mitochondrion | 12.7 | 9.82 |
| CDX82538 | Canola | nucleus | 49.21 | 9.69 |
| CDX87395 | Canola | cytosol | 33.33 | 9.46 |
| CDY24182 | Canola | nucleus | 38.89 | 9.06 |
| CDX88524 | Canola | cytosol | 31.75 | 9.05 |
| CDY22270 | Canola | cytosol | 31.75 | 8.93 |
| CDY56809 | Canola | cytosol | 31.75 | 8.93 |
| CDY50448 | Canola | cytosol | 16.67 | 8.24 |
| CDX79309 | Canola | nucleus | 32.54 | 8.06 |
| CDY67303 | Canola | nucleus | 32.54 | 7.87 |
| CDX90116 | Canola | nucleus | 32.54 | 7.87 |
| CDY07089 | Canola | nucleus | 39.68 | 7.86 |
| CDX68000 | Canola | nucleus | 31.75 | 7.86 |
| CDY11758 | Canola | nucleus, plastid | 32.54 | 7.4 |
| CDY43378 | Canola | nucleus | 34.13 | 7.0 |
| CDY24224 | Canola | nucleus | 34.13 | 7.0 |
| CDY58572 | Canola | nucleus | 27.78 | 6.9 |
| CDY02802 | Canola | nucleus | 28.57 | 6.74 |
| CDX88661 | Canola | nucleus | 26.98 | 6.67 |
| CDX94944 | Canola | nucleus | 26.19 | 6.64 |
| CDY23562 | Canola | nucleus | 32.54 | 6.61 |
| CDX93476 | Canola | nucleus | 26.19 | 6.6 |
| CDY44025 | Canola | nucleus | 32.54 | 6.59 |
| CDY32718 | Canola | nucleus | 26.98 | 6.43 |
| CDX93645 | Canola | nucleus | 30.16 | 6.21 |
| CDY43306 | Canola | cytosol | 30.16 | 6.2 |
Protein Annotations
| EnsemblPlants:CDY05744 | EnsemblPlantsGene:GSBRNA2T00120803001 | Gene3D:3.10.590.10 | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF63 | ProteinID:CDY05744 |
| ProteinID:CDY05744.1 | UniParc:UPI0004EEE4C8 | MapMan:16.5.2.1 | : | : | : |
Description
BnaC07g00590D
Coordinates
chrLK031964:-:580897..584762
Molecular Weight (calculated)
14508.3 Da
IEP (calculated)
7.410
GRAVY (calculated)
-0.632
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAIYRGYDY DNKTITPSSP TCIPLQSTLN AQKQYLILEL VSRELNGVVQ AMFRSMQAQE DEAHDVPNSP VTNSRDTQEV KLEQGLKIVK IFKEHTSKIC
101: ILNDFSFYEV RQKTILEKKA KQQQNP
101: ILNDFSFYEV RQKTILEKKA KQQQNP
001: MATVAPPADQ ATDLLQKLSL DSPAKASEIP EPNKKTAVYQ YGGVDVHGQV PSYDRSLTPM LPSDAADPSV CYVPNPYNPY QYYNVYGSGQ EWTDYPAYTN
101: PEGVDMNSGI YGENGTVVYP QGYGYAAYPY SPATSPAPQL GGEGQLYGAQ QYQYPNYFPN SGPYASSVAT PTQPDLSANK PAGVKTLPAD SNNVASAAGI
201: TKGSNGSAPV KPTNQATLNT SSNLYGMGAP GGGLAAGYQD PRYAYEGYYA PVPWHDGSKY SDVQRPVSGS GVASSYSKSS TVPSSRNQNY RSNSHYTSVH
301: QPSSVTGYGT AQGYYNRMYQ NKLYGQYGST GRSALGYGSS GYDSRTNGRG WAATDNKYRS WGRGNSYYYG NENNVDGLNE LNRGPRAKGT KNQKGNLDDS
401: LEVKEQTGES NVTEVGEADN TCVVPDREQY NKEDFPVDYA NAMFFIIKSY SEDDVHKSIK YNVWASTPNG NKKLAAAYQE AQQKAGGCPI FLFFSVNASG
501: QFVGLAEMTG PVDFNTNVEY WQQDKWTGSF PLKWHIVKDV PNSLLKHITL ENNENKPVTN SRDTQEVKLE QGLKIVKIFK EHSSKTCILD DFSFYEVRQK
601: TILEKKAKQT QKQVSEEKVT DEKKESATAE SASKESPAAV QTSSDVKVAE NGSVAKPVTG DVVANGC
101: PEGVDMNSGI YGENGTVVYP QGYGYAAYPY SPATSPAPQL GGEGQLYGAQ QYQYPNYFPN SGPYASSVAT PTQPDLSANK PAGVKTLPAD SNNVASAAGI
201: TKGSNGSAPV KPTNQATLNT SSNLYGMGAP GGGLAAGYQD PRYAYEGYYA PVPWHDGSKY SDVQRPVSGS GVASSYSKSS TVPSSRNQNY RSNSHYTSVH
301: QPSSVTGYGT AQGYYNRMYQ NKLYGQYGST GRSALGYGSS GYDSRTNGRG WAATDNKYRS WGRGNSYYYG NENNVDGLNE LNRGPRAKGT KNQKGNLDDS
401: LEVKEQTGES NVTEVGEADN TCVVPDREQY NKEDFPVDYA NAMFFIIKSY SEDDVHKSIK YNVWASTPNG NKKLAAAYQE AQQKAGGCPI FLFFSVNASG
501: QFVGLAEMTG PVDFNTNVEY WQQDKWTGSF PLKWHIVKDV PNSLLKHITL ENNENKPVTN SRDTQEVKLE QGLKIVKIFK EHSSKTCILD DFSFYEVRQK
601: TILEKKAKQT QKQVSEEKVT DEKKESATAE SASKESPAAV QTSSDVKVAE NGSVAKPVTG DVVANGC
Arabidopsis Description
ECT2ECT2 [Source:UniProtKB/TrEMBL;Acc:A0A178VBC2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.