Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020382.1-P | Field mustard | nucleus | 99.43 | 95.12 |
| CDY02802 | Canola | nucleus | 95.84 | 94.94 |
| CDY58572 | Canola | nucleus | 76.37 | 79.68 |
| CDX88661 | Canola | nucleus | 75.8 | 78.63 |
| AT5G58190.2 | Thale cress | nucleus | 76.56 | 76.7 |
| Zm00001d002008_P001 | Maize | cytosol | 9.45 | 68.49 |
| CDY51902 | Canola | cytosol | 13.42 | 45.81 |
| CDY57677 | Canola | mitochondrion | 12.48 | 38.6 |
| CDY50448 | Canola | cytosol | 17.58 | 36.47 |
| Solyc05g032850.2.1 | Tomato | nucleus | 39.89 | 34.93 |
| GSMUA_Achr1P10560_001 | Banana | nucleus | 29.11 | 34.61 |
| CDY23562 | Canola | nucleus | 39.13 | 33.39 |
| CDY69959 | Canola | nucleus | 25.14 | 33.33 |
| CDY44025 | Canola | nucleus | 39.13 | 33.28 |
| CDY42891 | Canola | nucleus | 24.95 | 33.0 |
| CDY50867 | Canola | nucleus | 24.95 | 33.0 |
| CDY43378 | Canola | nucleus | 38.19 | 32.9 |
| CDY24224 | Canola | nucleus | 38.0 | 32.74 |
| CDX91541 | Canola | mitochondrion | 10.02 | 32.52 |
| CDY21154 | Canola | nucleus | 24.76 | 32.19 |
| CDY39299 | Canola | nucleus | 25.71 | 32.15 |
| CDY07437 | Canola | nucleus | 25.52 | 32.07 |
| CDY29972 | Canola | nucleus | 24.76 | 31.95 |
| Os08t0556000-01 | Rice | nucleus | 37.62 | 31.89 |
| GSMUA_Achr4P12480_001 | Banana | cytosol | 34.78 | 31.67 |
| EES14722 | Sorghum | nucleus | 35.35 | 31.48 |
| TraesCS1A01G044500.1 | Wheat | nucleus | 37.43 | 30.84 |
| TraesCS1B01G057800.3 | Wheat | nucleus | 37.43 | 30.84 |
| CDY56809 | Canola | cytosol | 25.9 | 30.58 |
| Zm00001d024339_P001 | Maize | extracellular | 34.22 | 30.57 |
| TraesCS1D01G045100.1 | Wheat | nucleus | 37.05 | 30.53 |
| GSMUA_Achr4P11560_001 | Banana | nucleus | 37.43 | 30.51 |
| HORVU1Hr1G008330.2 | Barley | nucleus | 36.86 | 30.37 |
| CDY22270 | Canola | cytosol | 25.71 | 30.36 |
| Zm00001d049360_P004 | Maize | extracellular | 34.03 | 30.2 |
| TraesCS7B01G174500.1 | Wheat | nucleus | 34.03 | 30.05 |
| CDX87395 | Canola | cytosol | 25.14 | 29.95 |
| TraesCS7D01G276800.4 | Wheat | nucleus | 35.35 | 29.92 |
| TraesCS7A01G276800.3 | Wheat | nucleus | 35.35 | 29.92 |
| KXG25412 | Sorghum | cytosol | 36.11 | 29.89 |
| Os08t0224200-01 | Rice | mitochondrion | 34.97 | 29.89 |
| HORVU7Hr1G069070.2 | Barley | cytosol | 33.27 | 29.83 |
| Os04t0608800-01 | Rice | nucleus | 31.95 | 29.75 |
| TraesCS7A01G291700.1 | Wheat | cytosol | 33.08 | 29.66 |
| CDX88524 | Canola | cytosol | 24.76 | 29.64 |
| Zm00001d008913_P001 | Maize | cytosol, nucleus, peroxisome | 22.31 | 29.57 |
| TraesCS7B01G182100.2 | Wheat | cytosol | 33.08 | 29.56 |
| Zm00001d031981_P002 | Maize | cytosol | 36.11 | 29.34 |
| VIT_11s0065g00160.t01 | Wine grape | nucleus | 40.45 | 29.12 |
| TraesCS7D01G285000.1 | Wheat | endoplasmic reticulum | 32.7 | 28.27 |
| CDY56132 | Canola | nucleus | 23.82 | 28.19 |
| CDX68000 | Canola | nucleus | 27.03 | 28.09 |
| KXG27074 | Sorghum | cytosol | 29.3 | 28.08 |
| CDX94944 | Canola | nucleus | 26.28 | 27.97 |
| Zm00001d002372_P002 | Maize | nucleus | 29.11 | 27.9 |
| CDX93476 | Canola | nucleus | 26.09 | 27.6 |
| CDX79309 | Canola | nucleus | 26.46 | 27.5 |
| CDY52966 | Canola | cytosol | 23.25 | 27.46 |
| CDY05744 | Canola | cytosol | 6.43 | 26.98 |
| CDY67303 | Canola | nucleus | 26.46 | 26.87 |
| CDX90116 | Canola | nucleus | 26.46 | 26.87 |
| CDY24182 | Canola | nucleus | 27.41 | 26.8 |
| CDY23602 | Canola | nucleus | 30.43 | 25.8 |
| CDY43989 | Canola | nucleus | 30.81 | 25.71 |
| CDY11758 | Canola | nucleus, plastid | 26.65 | 25.45 |
| GSMUA_Achr4P04600_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 36.86 | 25.29 |
| CDX82538 | Canola | nucleus | 30.43 | 25.16 |
| Zm00001d047072_P001 | Maize | mitochondrion | 23.25 | 25.15 |
| CDX75712 | Canola | nucleus | 29.87 | 24.92 |
| CDY07089 | Canola | nucleus | 29.87 | 24.84 |
| HORVU7Hr1G058250.46 | Barley | cytosol, plastid | 21.93 | 24.47 |
| CDY43306 | Canola | cytosol | 27.41 | 23.65 |
| CDX93645 | Canola | nucleus | 25.71 | 22.22 |
| CDY60520 | Canola | cytosol | 4.91 | 19.7 |
Protein Annotations
| EnsemblPlants:CDY32718 | EnsemblPlantsGene:GSBRNA2T00052768001 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF56 | PFAM:PF04146 |
| PFscan:PS50882 | ProteinID:CDY32718 | ProteinID:CDY32718.1 | SEG:seg | UniParc:UPI0004EF348D | UniProt:A0A078H783 |
| MapMan:16.5.2.1 | : | : | : | : | : |
Description
BnaA02g07800DBnaA02g07800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H783]
Coordinates
chrLK032298:-:324487..327501
Molecular Weight (calculated)
58266.6 Da
IEP (calculated)
5.426
GRAVY (calculated)
-0.787
Length
529 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPASSRTQP TQIVSPGERP VMADNVGGDH HHQVSPGDER IVSSSSSSSV APPDPYSYYN LYHPYDWDVA HSGYAQGFNS WDGYPQYAAA TTTPEGMHVP
101: QVVYDGNSSF MYHQPGFAFN PYQSMMMEGQ VPFSPAYYPQ YGAPSPMHFA QAEIGGENSR YDPTSAYMVP FAGYGGGNLS GNQGGNALAS PIPYPQTMGI
201: LGPYDHNASQ LPVHGSGVAS SSSVGGYYHV GSYQTPNAVG SYYGADNSVR SAPDIGKRRE YSSVPTTNDL YGNRGPRASS RVESKNSSRL SSSAGNSANG
301: SSTAGPNPSL YNNPEFVTDY KNAKFFIVKS FSEDNVHRSI KYNVWASTPH GNKKLDTAYR DAEKMGGKCP IFLFFSVNAS GQFCGVSEMV GPVDFEKDAG
401: YWQQDRWSGQ FPVKWHILKD VPNNRFSHIL LQNNDNKPVT HSRDSQEVKL RQGIEMLRIF KEYEAHTSIL DDYSYYDERE RQKVGEDGGR KEEGEEETSS
501: SVEQLSERLQ AVTVEDGKEG EKEDLKEKT
101: QVVYDGNSSF MYHQPGFAFN PYQSMMMEGQ VPFSPAYYPQ YGAPSPMHFA QAEIGGENSR YDPTSAYMVP FAGYGGGNLS GNQGGNALAS PIPYPQTMGI
201: LGPYDHNASQ LPVHGSGVAS SSSVGGYYHV GSYQTPNAVG SYYGADNSVR SAPDIGKRRE YSSVPTTNDL YGNRGPRASS RVESKNSSRL SSSAGNSANG
301: SSTAGPNPSL YNNPEFVTDY KNAKFFIVKS FSEDNVHRSI KYNVWASTPH GNKKLDTAYR DAEKMGGKCP IFLFFSVNAS GQFCGVSEMV GPVDFEKDAG
401: YWQQDRWSGQ FPVKWHILKD VPNNRFSHIL LQNNDNKPVT HSRDSQEVKL RQGIEMLRIF KEYEAHTSIL DDYSYYDERE RQKVGEDGGR KEEGEEETSS
501: SVEQLSERLQ AVTVEDGKEG EKEDLKEKT
001: MDPASSSSSN QRNRIVSSGE RPVMADNGVQ QQVSHDDGRN IVSSSYSSSV VPSPDPAPYY NVLQTPTNLY HYDWDIANSG YAQGINTWDG YPRYATTTPE
101: AMHVPPVVYN DNSSLMYQYP GYGFNPYPSV MLEGQIPVSP AYYPQPFGAP SAMHYLPSDI DPTSAAYMIP YGQYGGGNYS GNQGDISLTS HIPYPQTMGI
201: LGPYDHNASQ VALHGSGVAS SSSLGGYYHV GSYQNPSSTP SYYGVDNRVR LTPDIGKRRE KDQGSISSTS DLYGNRGPRA SSRVKSKNSS KPCSTIGDSA
301: SDSSTAGPNP SLYNHPEFVT DYKNAKFFIV KSFSEDNVHR SIKYNVWAST PHGNKKLDTA YRDAEKMGGK CPIFLFFSVN ASGQFCGVSE MVGPVDFEKD
401: AGYWQQDRWS GQFPVKWHIV KDIPNNRFCH ILLQNNDNKP VTHSRDSQEV KLRQGIEMLR IFKEYEAHTS ILDDFGYYDE LEGQKVGEDG TRKKAGEEET
501: SVEQLSERLQ AVKVEDGKEE EKKELIAD
101: AMHVPPVVYN DNSSLMYQYP GYGFNPYPSV MLEGQIPVSP AYYPQPFGAP SAMHYLPSDI DPTSAAYMIP YGQYGGGNYS GNQGDISLTS HIPYPQTMGI
201: LGPYDHNASQ VALHGSGVAS SSSLGGYYHV GSYQNPSSTP SYYGVDNRVR LTPDIGKRRE KDQGSISSTS DLYGNRGPRA SSRVKSKNSS KPCSTIGDSA
301: SDSSTAGPNP SLYNHPEFVT DYKNAKFFIV KSFSEDNVHR SIKYNVWAST PHGNKKLDTA YRDAEKMGGK CPIFLFFSVN ASGQFCGVSE MVGPVDFEKD
401: AGYWQQDRWS GQFPVKWHIV KDIPNNRFCH ILLQNNDNKP VTHSRDSQEV KLRQGIEMLR IFKEYEAHTS ILDDFGYYDE LEGQKVGEDG TRKKAGEEET
501: SVEQLSERLQ AVKVEDGKEE EKKELIAD
Arabidopsis Description
ECT10Evolutionarily conserved C-terminal region 10 [Source:UniProtKB/TrEMBL;Acc:F4KDJ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.