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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • plasma membrane 1
  • mitochondrion 4
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d002008_P001 Maize cytosol 10.82 91.78
EES14722 Sorghum nucleus 75.44 78.62
Zm00001d024339_P001 Maize extracellular 73.34 76.69
Zm00001d049360_P004 Maize extracellular 73.67 76.51
HORVU7Hr1G069070.2 Barley cytosol 70.11 73.56
TraesCS7A01G291700.1 Wheat cytosol 70.11 73.56
TraesCS7B01G182100.2 Wheat cytosol 70.11 73.31
TraesCS7D01G285000.1 Wheat endoplasmic reticulum 68.5 69.28
Os04t0608800-01 Rice nucleus 61.55 67.08
CDY51902 Canola cytosol 14.54 58.06
Zm00001d008913_P001 Maize cytosol, nucleus, peroxisome 33.76 52.38
Os08t0556000-01 Rice nucleus 45.23 44.87
VIT_09s0054g01600.t01 Wine grape nucleus 47.33 43.99
Bra039366.1-P Field mustard nucleus 42.0 43.26
Bra034710.1-P Field mustard nucleus 41.36 43.1
CDY43378 Canola nucleus 42.33 42.67
CDY24224 Canola nucleus 42.16 42.51
KRH46969 Soybean endoplasmic reticulum, extracellular 44.26 42.35
Zm00001d047072_P001 Maize mitochondrion 33.44 42.33
CDY23562 Canola nucleus 42.33 42.26
CDY44025 Canola nucleus 42.33 42.12
AT3G13060.2 Thale cress nucleus 43.13 42.11
KRH44697 Soybean mitochondrion 44.43 41.79
VIT_01s0010g03690.t01 Wine grape cytosol 37.64 40.73
GSMUA_Achr1P10560_001 Banana nucleus 28.27 39.33
AT5G58190.2 Thale cress nucleus 30.69 35.98
Bra006780.1-P Field mustard cytosol 29.08 35.36
CDY32718 Canola nucleus 29.89 34.97
Solyc05g032850.2.1 Tomato nucleus 33.93 34.77
CDX88661 Canola nucleus 28.59 34.71
CDY58572 Canola nucleus 28.27 34.52
CDY02802 Canola nucleus 29.73 34.46
Bra020382.1-P Field mustard nucleus 30.05 33.63
VIT_11s0065g00160.t01 Wine grape nucleus 37.16 31.29
Os03t0748000-01 Rice plasma membrane 32.79 30.71
CDX90116 Canola nucleus 24.39 28.98
Bra010911.1-P Field mustard nucleus 24.39 28.98
CDY67303 Canola nucleus 24.39 28.98
Os07t0170300-01 Rice plasma membrane 28.11 28.9
AT1G27960.1 Thale cress cytosol 24.88 28.57
Os03t0158500-01 Rice nucleus 32.47 28.43
CDY11758 Canola nucleus, plastid 24.88 27.8
Os01t0679900-01 Rice nucleus 27.3 27.75
Os05t0105600-01 Rice cytosol 25.69 24.92
Os03t0317000-01 Rice plasma membrane 27.46 23.98
Os04t0129300-01 Rice nucleus 24.88 22.81
Os01t0329800-01 Rice cytosol 22.94 20.06
Protein Annotations
EnsemblPlants:Os08t0224200-01EnsemblPlantsGene:Os08g0224200Gene3D:3.10.590.10GO:GO:0003674GO:GO:0003676GO:GO:0003723
GO:GO:0005488InterPro:IPR007275InterPro:YTH_domainPANTHER:PTHR12357PANTHER:PTHR12357:SF64PFAM:PF04146
PFscan:PS50882ProteinID:BAT04384.1ProteinID:BAT04385.1SEG:segUniParc:UPI0003938948UniProt:A0A0P0XDH3
MapMan:16.5.2.1:::::
Description
Similar to H0702G05.3 protein. (Os08t0224200-01);Similar to H0702G05.3 protein. (Os08t0224200-02)
Coordinates
chr8:-:7559100..7563171
Molecular Weight (calculated)
68422.6 Da
IEP (calculated)
6.638
GRAVY (calculated)
-0.771
Length
619 amino acids
Sequence
(BLAST)
001: SSRSPRRRLP PKLRLLARVR PPPAPISIRR GAAVRPAASA DCMIPPQSEI VGENNASKSA AKEQILSSTN EKMTTSVPQG ASSSKSPKGA QEKASFLGKG
101: GEQPFYQPNV YAPQPQTIYS GGYLNHLGQW EEYPHYVNME GLHSVSPGIY NDNQSIMLSP GYANNPQMMY GAYSPGVGDG QPYLPLHFPF SSPYYQPPAS
201: PSMGYSNSAT GMSQGDPMLQ QEYFLPDGLL YSPTPGYHQP FGSFDRASTQ PSSTPGLFGQ GNTPLAFGMH HGSMYAPGSY KPRQQGGKFG GTTPSWSSGR
301: RFGTFDLSAN QQKGSMPFGI QNGALEFLNE QNRGPRATKP KKQDTENSSI DDKNEKNVPL VDSELYNRPD FVTEYKDAKF FVIKSYTEDH VHRSIKYNVW
401: ASTASGNRKL DSAYRLAKEK EDYCPIFLFF SVNGSGQFCG VAEMIGPVDF DKSVDYWQQD KWSGQFPVKW HIIKDVPNNL LRHIILENND NKPVTNSRDT
501: QEVKLEHGLQ MLTIFKNHES ETNILEDFDF YEQREKALQE NRRQQQPASP ELQKPAENKA LGELMAHISD TFGQTVQLKE TENGESKPAV EGVSSADEAS
601: TATTKAEDGT ASTNASPVE
Best Arabidopsis Sequence Match ( AT3G13060.2 )
(BLAST)
001: MATTQSHTSD LTSEEQPASL DIMKEQTVPA NNETSASFKS SQEAPVVVHP AKVAPLTGPY GLAGDFAGHL PSSILSPQAQ GFYYRGYENP TGEWDEYSSY
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVKLEQGIE MLKIFKNYDA DTSILDDFGF YEEREKIIQD RKARRQPSLP SAGVVAGENE HKPASAALPT DFMKNMSKSF
601: AQVVRLDEGS KEAVKASSSP DAITTAAVSS GQSN
Arabidopsis Description
ECT5Evolutionarily conserved C-terminal region 5 [Source:UniProtKB/TrEMBL;Acc:Q0WR25]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.