Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002008_P001 | Maize | cytosol | 9.65 | 71.23 |
| CDX90116 | Canola | nucleus | 66.05 | 68.33 |
| CDY67303 | Canola | nucleus | 66.05 | 68.33 |
| CDY11758 | Canola | nucleus, plastid | 70.13 | 68.23 |
| Bra010911.1-P | Field mustard | nucleus | 65.86 | 68.14 |
| AT3G03950.3 | Thale cress | cytosol | 25.79 | 32.48 |
| GSMUA_Achr1P10560_001 | Banana | nucleus | 26.16 | 31.69 |
| VIT_01s0010g03690.t01 | Wine grape | cytosol | 32.47 | 30.59 |
| GSMUA_Achr4P12480_001 | Banana | cytosol | 32.28 | 29.95 |
| AT3G13060.2 | Thale cress | nucleus | 34.69 | 29.5 |
| Zm00001d008913_P001 | Maize | cytosol, nucleus, peroxisome | 21.34 | 28.82 |
| AT5G61020.1 | Thale cress | cytosol | 26.35 | 28.69 |
| GSMUA_Achr4P11560_001 | Banana | nucleus | 34.14 | 28.35 |
| Os08t0556000-01 | Rice | nucleus | 32.47 | 28.04 |
| Os04t0608800-01 | Rice | nucleus | 28.76 | 27.29 |
| TraesCS7B01G174500.1 | Wheat | nucleus | 30.24 | 27.21 |
| TraesCS7A01G276800.3 | Wheat | nucleus | 31.54 | 27.2 |
| TraesCS7D01G276800.4 | Wheat | nucleus | 31.54 | 27.2 |
| KXG25412 | Sorghum | cytosol | 32.1 | 27.07 |
| EES14722 | Sorghum | nucleus | 29.68 | 26.94 |
| TraesCS1A01G044500.1 | Wheat | nucleus | 31.91 | 26.79 |
| AT1G55500.5 | Thale cress | cytosol | 30.06 | 26.78 |
| TraesCS1B01G057800.3 | Wheat | nucleus | 31.73 | 26.64 |
| TraesCS1D01G045100.1 | Wheat | nucleus | 31.73 | 26.64 |
| HORVU1Hr1G008330.2 | Barley | nucleus | 31.73 | 26.64 |
| AT5G58190.2 | Thale cress | nucleus | 25.97 | 26.52 |
| KXG27074 | Sorghum | cytosol | 26.9 | 26.27 |
| Zm00001d024339_P001 | Maize | extracellular | 28.76 | 26.18 |
| AT1G09810.1 | Thale cress | nucleus | 22.82 | 26.17 |
| Zm00001d049360_P004 | Maize | extracellular | 28.76 | 26.01 |
| Zm00001d031981_P002 | Maize | cytosol | 31.35 | 25.96 |
| AT1G79270.1 | Thale cress | nucleus | 24.86 | 25.38 |
| Zm00001d002372_P002 | Maize | nucleus | 25.97 | 25.36 |
| Os08t0224200-01 | Rice | mitochondrion | 28.57 | 24.88 |
| TraesCS7B01G182100.2 | Wheat | cytosol | 27.27 | 24.83 |
| TraesCS7A01G291700.1 | Wheat | cytosol | 27.09 | 24.75 |
| AT3G13460.1 | Thale cress | cytosol | 30.43 | 24.59 |
| HORVU7Hr1G069070.2 | Barley | cytosol | 26.9 | 24.58 |
| Zm00001d047072_P001 | Maize | mitochondrion | 22.26 | 24.54 |
| TraesCS7D01G285000.1 | Wheat | endoplasmic reticulum | 26.72 | 23.53 |
| GSMUA_Achr4P04600_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 33.02 | 23.09 |
| HORVU7Hr1G058250.46 | Barley | cytosol, plastid | 19.85 | 22.57 |
| AT1G48110.2 | Thale cress | nucleus | 26.72 | 22.54 |
| AT3G17330.1 | Thale cress | nucleus | 24.86 | 22.52 |
Protein Annotations
| MapMan:16.5.2.1 | Gene3D:3.10.590.10 | EntrezGene:839689 | ProteinID:AEE30895.1 | ArrayExpress:AT1G27960 | EnsemblPlantsGene:AT1G27960 |
| RefSeq:AT1G27960 | TAIR:AT1G27960 | RefSeq:AT1G27960-TAIR-G | EnsemblPlants:AT1G27960.1 | TAIR:AT1G27960.1 | Unigene:At.40970 |
| EMBL:BT022109 | Symbol:ECT9 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| GO:GO:0008150 | InterPro:IPR007275 | RefSeq:NP_174117.2 | PFAM:PF04146 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007095 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50882 | PANTHER:PTHR12357 |
| PANTHER:PTHR12357:SF56 | UniProt:Q500V8 | UniParc:UPI000034F417 | InterPro:YTH_domain | SEG:seg | : |
Description
ECT9At1g27960 [Source:UniProtKB/TrEMBL;Acc:Q500V8]
Coordinates
chr1:-:9742137..9745796
Molecular Weight (calculated)
61280.2 Da
IEP (calculated)
6.312
GRAVY (calculated)
-0.646
Length
539 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASYRSTDW FPPTTTTGSF TGLNTDQSVL QDQDIVSSRP FCGQGTESFH IGADTPRSNH SHSDVPSFDK VSPGMINEMF YHSNGVPSDF QRSSLSTRNQ
101: SSLQHYGDLY ADDSRYFVPF HLSNQQYPTP EDIHLSPEFH MFQANSRHFD RHVNERNSSE IDNMMRARGN SVLRDNIYGE PRGMNLNPFS GENMFPPLAS
201: TRPCMRHLGS AELLANDFNM GPAHGGLHDA FESAANLSYR EQAYAQCKRS PFSASSSSPT WENDYNLPPL DEARSESYND FSHCPAMLDM LTESNRGPRA
301: SRLNSKSKMI SYDRVDRFCQ QELLSQFRDA KFFVIKSYSE DNVHKSIKHC VWASTKNGNK KLDAAYREAK KKDVACPVFL LFSVNASSQF CGVAEMVGPV
401: DFNTSVEYWQ QDRWSGHFPV QWLIVKDVPN SLFRHIIIES NDNKPVTNSR DTQEVGLEKG IEMLDIFISC EMRSSILDDF NFYEERQIAI QDRKARQRAV
501: LESLALSATS APTYSLHDDF VREMSKHFAE ALALQHRPK
101: SSLQHYGDLY ADDSRYFVPF HLSNQQYPTP EDIHLSPEFH MFQANSRHFD RHVNERNSSE IDNMMRARGN SVLRDNIYGE PRGMNLNPFS GENMFPPLAS
201: TRPCMRHLGS AELLANDFNM GPAHGGLHDA FESAANLSYR EQAYAQCKRS PFSASSSSPT WENDYNLPPL DEARSESYND FSHCPAMLDM LTESNRGPRA
301: SRLNSKSKMI SYDRVDRFCQ QELLSQFRDA KFFVIKSYSE DNVHKSIKHC VWASTKNGNK KLDAAYREAK KKDVACPVFL LFSVNASSQF CGVAEMVGPV
401: DFNTSVEYWQ QDRWSGHFPV QWLIVKDVPN SLFRHIIIES NDNKPVTNSR DTQEVGLEKG IEMLDIFISC EMRSSILDDF NFYEERQIAI QDRKARQRAV
501: LESLALSATS APTYSLHDDF VREMSKHFAE ALALQHRPK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.