Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69959 | Canola | nucleus | 75.23 | 80.7 |
| Bra031960.1-P | Field mustard | nucleus | 74.3 | 80.3 |
| CDY50867 | Canola | nucleus | 74.3 | 79.5 |
| CDY42891 | Canola | nucleus | 74.3 | 79.5 |
| Bra036423.1-P | Field mustard | nucleus | 74.77 | 78.82 |
| CDY29972 | Canola | nucleus | 75.47 | 78.78 |
| CDY21154 | Canola | nucleus | 74.53 | 78.38 |
| AT5G61020.1 | Thale cress | cytosol | 42.06 | 36.36 |
| GSMUA_Achr4P14820_001 | Banana | cytosol | 26.17 | 33.84 |
| AT1G55500.5 | Thale cress | cytosol | 45.33 | 32.07 |
| GSMUA_Achr7P01490_001 | Banana | nucleus | 41.82 | 31.96 |
| EER93313 | Sorghum | cytosol | 40.89 | 30.59 |
| AT3G13460.1 | Thale cress | cytosol | 46.96 | 30.13 |
| GSMUA_Achr4P22630_001 | Banana | nucleus | 42.99 | 29.63 |
| AT1G09810.1 | Thale cress | nucleus | 32.48 | 29.57 |
| GSMUA_Achr5P02830_001 | Banana | cytosol | 42.06 | 29.22 |
| EER93461 | Sorghum | nucleus | 44.86 | 29.14 |
| Os03t0748000-01 | Rice | plasma membrane | 44.86 | 29.05 |
| VIT_08s0007g07450.t01 | Wine grape | cytosol | 46.96 | 28.96 |
| TraesCS5D01G439100.1 | Wheat | nucleus | 39.72 | 28.91 |
| GSMUA_Achr4P21380_001 | Banana | nucleus | 44.39 | 28.88 |
| TraesCS5A01G431200.1 | Wheat | nucleus | 39.72 | 28.86 |
| Os07t0170300-01 | Rice | plasma membrane | 40.19 | 28.57 |
| TraesCS5B01G433000.1 | Wheat | cytosol | 39.49 | 28.36 |
| Zm00001d034005_P003 | Maize | plasma membrane | 43.69 | 28.33 |
| TraesCS5D01G396400.3 | Wheat | nucleus | 43.69 | 28.25 |
| TraesCS5B01G391500.1 | Wheat | nucleus | 43.46 | 28.1 |
| TraesCS5A01G386600.2 | Wheat | nucleus | 43.46 | 28.05 |
| GSMUA_Achr4P28430_001 | Banana | nucleus, plastid | 39.72 | 27.64 |
| KRH70155 | Soybean | nucleus | 40.65 | 27.62 |
| HORVU5Hr1G094950.6 | Barley | cytosol, nucleus | 42.76 | 27.52 |
| GSMUA_Achr7P27220_001 | Banana | cytosol | 42.29 | 27.38 |
| KRG94807 | Soybean | nucleus | 42.06 | 27.31 |
| TraesCS5A01G431100.1 | Wheat | cytosol | 40.65 | 27.1 |
| TraesCS5D01G439200.1 | Wheat | cytosol | 40.42 | 26.95 |
| KXG34475 | Sorghum | cytosol | 40.65 | 26.93 |
| TraesCS5B01G432900.2 | Wheat | extracellular | 40.65 | 26.85 |
| KRH06717 | Soybean | nucleus | 41.59 | 26.85 |
| AT3G13060.2 | Thale cress | nucleus | 39.49 | 26.66 |
| KXG40139 | Sorghum | plastid | 44.16 | 26.58 |
| AT1G79270.1 | Thale cress | nucleus | 32.71 | 26.52 |
| Os03t0158500-01 | Rice | nucleus | 43.46 | 26.31 |
| Zm00001d007890_P002 | Maize | mitochondrion | 39.95 | 26.19 |
| HORVU5Hr1G104380.1 | Barley | plastid | 40.19 | 26.02 |
| AT1G27960.1 | Thale cress | cytosol | 32.48 | 25.79 |
| AT5G58190.2 | Thale cress | nucleus | 31.07 | 25.19 |
| Zm00001d018896_P002 | Maize | mitochondrion | 40.65 | 24.65 |
| Zm00001d048424_P003 | Maize | plastid | 42.52 | 24.59 |
| TraesCS4D01G273200.4 | Wheat | cytosol | 41.36 | 24.48 |
| TraesCS4A01G031600.2 | Wheat | cytosol | 41.59 | 24.42 |
| HORVU4Hr1G072940.4 | Barley | cytosol | 42.29 | 24.39 |
| TraesCS4B01G274500.2 | Wheat | plastid | 42.99 | 23.99 |
| HORVU5Hr1G104390.3 | Barley | plastid | 38.32 | 23.84 |
| Zm00001d027731_P012 | Maize | plastid | 43.93 | 23.41 |
| AT3G17330.1 | Thale cress | nucleus | 31.31 | 22.52 |
| AT1G48110.2 | Thale cress | nucleus | 32.24 | 21.6 |
Protein Annotations
| MapMan:16.5.2.1 | Gene3D:3.10.590.10 | EntrezGene:819550 | ProteinID:AEE74017.1 | EMBL:AK317103 | ArrayExpress:AT3G03950 |
| EnsemblPlantsGene:AT3G03950 | RefSeq:AT3G03950 | TAIR:AT3G03950 | RefSeq:AT3G03950-TAIR-G | EnsemblPlants:AT3G03950.3 | TAIR:AT3G03950.3 |
| EMBL:AY894117 | Unigene:At.27388 | Symbol:ECT1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003729 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019722 |
| InterPro:IPR007275 | RefSeq:NP_001030629.1 | PFAM:PF04146 | PO:PO:0000003 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006504 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0009072 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020121 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50882 | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF56 | UniProt:Q3MK94 |
| UniParc:UPI00005B5F69 | InterPro:YTH_domain | SEG:seg | : | : | : |
Description
ECT1AT3G03950 protein [Source:UniProtKB/TrEMBL;Acc:Q3MK94]
Coordinates
chr3:+:1021146..1024015
Molecular Weight (calculated)
48234.1 Da
IEP (calculated)
7.208
GRAVY (calculated)
-0.699
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAASSDRL VTSFPLLDTA DLFQDLSLGS DANEVPMNFT KGSFQHPYGH APYGASSHGS ERRPNMNAGN LLNGGDSIGS YPWGYIPANY PSGGYPDPRF
101: GYDRNSNHSS FSHLMNPHSS QEVPSFDQLG YNDHLYSNHG LYGLYGNVID SGHAYGTFGY DSWKLGRGWY PVDGYRKTRS FNHGRGYSDE KADRLNELCR
201: GPRSSDFKNP QVLNSSMLDA MKQDVSAVDL QRYNGENFPE SFVKAKFFVI KSYSEDDVHN CIKYGAWSST PTGNKKLNAA YYEAKENSQE CPVYLLFSVN
301: ASGQFVGLAE MVGPVDFNKT MEYWQQDKWI GCFPVKWHII KDIPNSLLRH ITLANNENKP VTNSRDTQEV NLEHGTKIIK IFKEYMSKTC ILDDYKFYET
401: RQKIIRDKKI KQKKQALDGA SGETINLS
101: GYDRNSNHSS FSHLMNPHSS QEVPSFDQLG YNDHLYSNHG LYGLYGNVID SGHAYGTFGY DSWKLGRGWY PVDGYRKTRS FNHGRGYSDE KADRLNELCR
201: GPRSSDFKNP QVLNSSMLDA MKQDVSAVDL QRYNGENFPE SFVKAKFFVI KSYSEDDVHN CIKYGAWSST PTGNKKLNAA YYEAKENSQE CPVYLLFSVN
301: ASGQFVGLAE MVGPVDFNKT MEYWQQDKWI GCFPVKWHII KDIPNSLLRH ITLANNENKP VTNSRDTQEV NLEHGTKIIK IFKEYMSKTC ILDDYKFYET
401: RQKIIRDKKI KQKKQALDGA SGETINLS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.