CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94807	Soybean	nucleus	67.3	64.34
KRH06717	Soybean	nucleus	67.3	63.95
CDY57677	Canola	mitochondrion	13.65	50.29
CDY07437	Canola	nucleus	30.79	46.08
CDY39299	Canola	nucleus	30.32	45.15
CDY50448	Canola	cytosol	18.25	45.1
Bra004105.1-P	Field mustard	nucleus	27.94	44.44
CDY56132	Canola	nucleus	31.11	43.85
CDX91541	Canola	mitochondrion	11.27	43.56
VIT_08s0007g07450.t01	Wine grape	cytosol	47.78	43.37
CDY52966	Canola	cytosol	30.79	43.3
KRH26322	Soybean	cytosol	8.73	42.97
Bra008509.1-P	Field mustard	cytosol	28.73	42.79
Bra031960.1-P	Field mustard	nucleus	26.67	42.42
CDY69959	Canola	nucleus	26.83	42.36
GSMUA_Achr7P01490_001	Banana	nucleus	37.62	42.32
CDY21154	Canola	nucleus	26.83	41.52
Bra036423.1-P	Field mustard	nucleus	26.67	41.38
CDY50867	Canola	nucleus	26.19	41.25
CDY42891	Canola	nucleus	26.19	41.25
CDY29972	Canola	nucleus	26.83	41.22
GSMUA_Achr4P14820_001	Banana	cytosol	21.59	41.09
GSMUA_Achr4P22630_001	Banana	nucleus	40.16	40.74
AT3G03950.3	Thale cress	cytosol	27.62	40.65
AT5G61020.1	Thale cress	cytosol	31.9	40.61
GSMUA_Achr5P02830_001	Banana	cytosol	39.37	40.26
GSMUA_Achr4P21380_001	Banana	nucleus	41.75	39.97
KRH43005	Soybean	nucleus	44.44	39.6
GSMUA_Achr4P28430_001	Banana	nucleus, plastid	38.25	39.19
KRH59123	Soybean	nucleus	43.65	38.84
GSMUA_Achr7P27220_001	Banana	cytosol	39.68	37.82
TraesCS5B01G391500.1	Wheat	nucleus	39.52	37.61
EER93461	Sorghum	nucleus	39.21	37.48
TraesCS5D01G396400.3	Wheat	nucleus	39.37	37.46
TraesCS5A01G386600.2	Wheat	nucleus	39.37	37.41
EER93313	Sorghum	cytosol	33.81	37.24
Os03t0748000-01	Rice	plasma membrane	38.89	37.07
Zm00001d034005_P003	Maize	plasma membrane	38.57	36.82
HORVU5Hr1G094950.6	Barley	cytosol, nucleus	38.73	36.69
KRH36908	Soybean	cytosol	25.4	36.04
TraesCS5B01G433000.1	Wheat	cytosol	33.81	35.74
TraesCS5D01G439100.1	Wheat	nucleus	33.17	35.54
TraesCS5A01G431200.1	Wheat	nucleus	33.02	35.31
Os07t0170300-01	Rice	plasma membrane	33.17	34.72
Os03t0158500-01	Rice	nucleus	38.89	34.65
KXG40139	Sorghum	plastid	38.41	34.04
Bra018951.1-P	Field mustard	cytosol	13.81	33.59
Bra014253.1-P	Field mustard	cytosol	15.87	33.56
TraesCS5A01G431100.1	Wheat	cytosol	33.97	33.33
TraesCS5D01G439200.1	Wheat	cytosol	33.49	32.87
KXG34475	Sorghum	cytosol	33.65	32.82
TraesCS5B01G432900.2	Wheat	extracellular	33.17	32.25
TraesCS4D01G273200.4	Wheat	cytosol	36.83	32.09
Zm00001d048424_P003	Maize	plastid	37.14	31.62
HORVU5Hr1G104380.1	Barley	plastid	33.17	31.62
Bra038524.1-P	Field mustard	cytosol	11.27	31.56
Zm00001d007890_P002	Maize	mitochondrion	32.7	31.55
TraesCS4A01G031600.2	Wheat	cytosol	36.35	31.41
HORVU4Hr1G072940.4	Barley	cytosol	36.98	31.4
TraesCS4B01G274500.2	Wheat	plastid	37.46	30.77
Zm00001d018896_P002	Maize	mitochondrion	33.81	30.17
Zm00001d027731_P012	Maize	plastid	38.25	30.01
HORVU5Hr1G104390.3	Barley	plastid	32.38	29.65
KRH43645	Soybean	nucleus	26.19	28.5
KRH13810	Soybean	nucleus, plastid	25.56	27.9
KRH46969	Soybean	endoplasmic reticulum, extracellular	27.3	26.58
KRH44697	Soybean	mitochondrion	27.14	25.99
KRH11876	Soybean	endoplasmic reticulum	28.25	25.39
KRH50636	Soybean	cytosol	27.78	25.18
KRH02430	Soybean	cytosol	27.62	25.07
KRH06073	Soybean	cytosol, nucleus, peroxisome	19.37	24.6

Protein Annotations

EMBL:ACUP02000753	EnsemblPlants:KRH70155	EnsemblPlantsGene:GLYMA_02G072000	EntrezGene:100789473	Gene3D:3.10.590.10	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357
PANTHER:PTHR12357:SF56	PFAM:PF04146	PFscan:PS50882	ProteinID:KRH70155	ProteinID:KRH70155.1	SEG:seg
UniParc:UPI0006EDA7B9	UniProt:A0A0R0L043	MapMan:16.5.2.1	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:6320308..6325061

Molecular Weight (calculated)

68633.7 Da

IEP (calculated)

7.849

GRAVY (calculated)

-0.703

Length

630 amino acids

Sequence
(BLAST)

001: MATLAPSSDT ATADLLQNLS LDSESKTVPE PAKKNGHGPA KGVTKPFNPN ASFTPNGHLS ASAYYYGGKG VLGDSCSYLY HQGYGYTPYG APMQHDDNLY
101: GLQQYQYPSS YYQSPASADG SFAANKINAQ EGRISAAASA EHIPSSAVIN KGSSIGVVNE GSTNNNGVKE FLSSTQRPLL NSNDSYQRAG FPVYAPLSGY
201: QDPRVGPHGT QPALPLDPLL FSNKKSNDGA KIGLSSPAVP GKKISSQRNT TIPQPLPQSM NLHGSIHSSG LEPFSGFING TYPSNTMYSQ YGNAYRASSH
301: FGQAPYGYGY RIGSVNNKPK ASNDGCAIDH VKRNMDGFGE LNKGPRSGNS SDDKSVDGPG PVTLLIKGQN LPIKSDNKEV PLVPNNEQYN GKDFPENYSD
401: AKFFVIKSYS EDDIHKSIKY KVWASTFNGN KKLDAAYHES KEKPGDCPVF LLFSVNTSGQ FVGLAEMVSP LDFGRTVEYW QQDRWSGCFS VKWHIIKDIP
501: NSVLRPITLE NNENKPVTNS RDTQEVKFEK GIQILKIFKQ HSSKTCILDD FGFYETREKM IQERKSMEQQ LPKQASKSND LTTNGTVMLP KSHDGALKNE
601: SATTDEAGQK EKLVEVNGST QASEDCSKNC

Best Arabidopsis Sequence Match ( AT1G55500.4 )
(BLAST)

001: MSTVAPPADQ AADVLKKLSL DSKSRTLEIP EPTKKTGVYQ YGAMDSNGQV PSFDRSLSPM LPSDALDPSV FYVPNVYQQP YYYGYGSDYT GYTNSESVDM
101: TSGAYGENAS LVYPQGYGYA AFPYSPATSP APQLGGDGQL YGAQQYQYPF PLTASSGPFA SSVPASTQSK LSTNKAANSA SAGIPKGMNG SAPVKPLNQS
201: ALYGNSALGG GLAAGYQDPR YSYDGFYTPV SWHDGSNFSD VQRSVSGSGV ASSYSKANNN VPATRNQNSS SNSHYTSMYQ PASMTGYAAQ GYYDRVSPNK
301: SYGQYGSTVR SGMGYGSSGY GSRTNERGWL NTDNKYRSRG RGNSYFYGNE NIDGLNELNR GPRAKGTKAT EEVSSEEVKK QTFDESNTEE TVTCVLPDRE
401: ECNRDDFPVE YKDAKFFIIK SYSEDDVHKS IKYNVWASTP NGNKKLDAAY QEAQQKSSGC PVFLFFSVNA SGQFIGLAEM KGPVDFNKNI EYWQQDKWTG
501: SFPLKWHILK DVPNSLLKHI TLEYNENKPV TNSRDTQEVK LEQGLKVVKI FKEHNSKTCI LDDFSFYEAR QKTILEKKAK QQQSQKQARE ENG

Arabidopsis Description

ECT4evolutionarily conserved C-terminal region 4 [Source:TAIR;Acc:AT1G55500]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.