Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY57677 | Canola | mitochondrion | 68.1 | 64.91 |
| CDY50448 | Canola | cytosol | 86.5 | 55.29 |
| Bra038524.1-P | Field mustard | cytosol | 65.03 | 47.11 |
| Bra018951.1-P | Field mustard | cytosol | 65.64 | 41.31 |
| Bra014253.1-P | Field mustard | cytosol | 74.23 | 40.6 |
| CDY39299 | Canola | nucleus | 73.62 | 28.37 |
| CDY07437 | Canola | nucleus | 71.78 | 27.79 |
| CDY56132 | Canola | nucleus | 68.1 | 24.83 |
| CDY52966 | Canola | cytosol | 66.87 | 24.33 |
| CDY51902 | Canola | cytosol | 18.4 | 19.35 |
| AT5G61020.1 | Thale cress | cytosol | 58.28 | 19.19 |
| CDY69959 | Canola | nucleus | 36.81 | 15.04 |
| CDY21154 | Canola | nucleus | 36.81 | 14.74 |
| CDY50867 | Canola | nucleus | 35.58 | 14.5 |
| CDY42891 | Canola | nucleus | 35.58 | 14.5 |
| CDY29972 | Canola | nucleus | 36.2 | 14.39 |
| CDY24182 | Canola | nucleus | 46.01 | 13.86 |
| CDY56809 | Canola | cytosol | 37.42 | 13.62 |
| CDY22270 | Canola | cytosol | 36.81 | 13.39 |
| CDX88524 | Canola | cytosol | 36.2 | 13.35 |
| CDX87395 | Canola | cytosol | 36.2 | 13.29 |
| GSMUA_Achr4P14820_001 | Banana | cytosol | 26.38 | 12.99 |
| CDY05744 | Canola | cytosol | 9.82 | 12.7 |
| CDX75712 | Canola | nucleus | 46.63 | 11.99 |
| CDX79309 | Canola | nucleus | 37.42 | 11.98 |
| CDY07089 | Canola | nucleus | 46.63 | 11.95 |
| CDX82538 | Canola | nucleus | 46.63 | 11.88 |
| CDX68000 | Canola | nucleus | 36.81 | 11.79 |
| GSMUA_Achr7P01490_001 | Banana | nucleus | 40.49 | 11.79 |
| CDY23602 | Canola | nucleus | 44.79 | 11.7 |
| CDY43989 | Canola | nucleus | 45.4 | 11.67 |
| Os07t0170300-01 | Rice | plasma membrane | 42.94 | 11.63 |
| TraesCS5A01G431200.1 | Wheat | nucleus | 41.72 | 11.54 |
| VIT_08s0007g07450.t01 | Wine grape | cytosol | 49.08 | 11.53 |
| EER93461 | Sorghum | nucleus | 46.01 | 11.38 |
| Zm00001d034005_P003 | Maize | plasma membrane | 46.01 | 11.36 |
| EER93313 | Sorghum | cytosol | 39.88 | 11.36 |
| KRH70155 | Soybean | nucleus | 43.56 | 11.27 |
| TraesCS5D01G439100.1 | Wheat | nucleus | 40.49 | 11.22 |
| GSMUA_Achr5P02830_001 | Banana | cytosol | 41.72 | 11.04 |
| GSMUA_Achr4P21380_001 | Banana | nucleus | 44.17 | 10.94 |
| GSMUA_Achr4P28430_001 | Banana | nucleus, plastid | 41.1 | 10.89 |
| TraesCS5A01G386600.2 | Wheat | nucleus | 44.17 | 10.86 |
| KXG34475 | Sorghum | cytosol | 42.94 | 10.84 |
| CDY23562 | Canola | nucleus | 41.1 | 10.81 |
| GSMUA_Achr4P22630_001 | Banana | nucleus | 41.1 | 10.79 |
| CDY44025 | Canola | nucleus | 41.1 | 10.77 |
| CDY24224 | Canola | nucleus | 40.49 | 10.75 |
| TraesCS5B01G433000.1 | Wheat | cytosol | 39.26 | 10.74 |
| TraesCS5D01G396400.3 | Wheat | nucleus | 43.56 | 10.73 |
| TraesCS5B01G391500.1 | Wheat | nucleus | 43.56 | 10.73 |
| HORVU5Hr1G094950.6 | Barley | cytosol, nucleus | 43.56 | 10.68 |
| Os03t0158500-01 | Rice | nucleus | 46.01 | 10.61 |
| Os03t0748000-01 | Rice | plasma membrane | 42.94 | 10.59 |
| CDY67303 | Canola | nucleus | 33.74 | 10.56 |
| CDX90116 | Canola | nucleus | 33.74 | 10.56 |
| CDX94944 | Canola | nucleus | 31.9 | 10.46 |
| GSMUA_Achr7P27220_001 | Banana | cytosol | 42.33 | 10.44 |
| TraesCS5D01G439200.1 | Wheat | cytosol | 41.1 | 10.44 |
| TraesCS5A01G431100.1 | Wheat | cytosol | 41.1 | 10.44 |
| CDY43378 | Canola | nucleus | 39.26 | 10.42 |
| CDX93476 | Canola | nucleus | 31.9 | 10.4 |
| TraesCS5B01G432900.2 | Wheat | extracellular | 41.1 | 10.34 |
| HORVU5Hr1G104380.1 | Barley | plastid | 41.1 | 10.14 |
| KXG40139 | Sorghum | plastid | 44.17 | 10.13 |
| Zm00001d007890_P002 | Maize | mitochondrion | 40.49 | 10.11 |
| KRH06717 | Soybean | nucleus | 41.1 | 10.11 |
| CDY32718 | Canola | nucleus | 32.52 | 10.02 |
| KRG94807 | Soybean | nucleus | 40.49 | 10.02 |
| CDX88661 | Canola | nucleus | 31.29 | 10.0 |
| TraesCS4D01G273200.4 | Wheat | cytosol | 44.17 | 9.96 |
| CDY02802 | Canola | nucleus | 32.52 | 9.93 |
| TraesCS4A01G031600.2 | Wheat | cytosol | 44.17 | 9.88 |
| CDY58572 | Canola | nucleus | 30.67 | 9.86 |
| CDY11758 | Canola | nucleus, plastid | 33.13 | 9.75 |
| Zm00001d048424_P003 | Maize | plastid | 44.17 | 9.73 |
| HORVU4Hr1G072940.4 | Barley | cytosol | 44.17 | 9.7 |
| Zm00001d018896_P002 | Maize | mitochondrion | 41.1 | 9.49 |
| HORVU5Hr1G104390.3 | Barley | plastid | 39.88 | 9.45 |
| TraesCS4B01G274500.2 | Wheat | plastid | 44.17 | 9.39 |
| CDX93645 | Canola | nucleus | 34.36 | 9.15 |
| Zm00001d027731_P012 | Maize | plastid | 43.56 | 8.84 |
| CDY43306 | Canola | cytosol | 33.13 | 8.81 |
| CDY60520 | Canola | cytosol | 4.91 | 6.06 |
Protein Annotations
| EnsemblPlants:CDX91541 | EnsemblPlantsGene:GSBRNA2T00152924001 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF56 | PFAM:PF04146 |
| PFscan:PS50882 | ProteinID:CDX91541 | ProteinID:CDX91541.1 | SEG:seg | UniParc:UPI0004EEBC25 | MapMan:16.5.2.1 |
Description
BnaC02g16190D
Coordinates
chrLK031868:+:224882..226114
Molecular Weight (calculated)
18213.4 Da
IEP (calculated)
8.176
GRAVY (calculated)
-0.501
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRLPFPGYY GGYYPQAYQY YPRYGYDMMN YASGKTTNTT LHTSNGNKKL NAAYNEAAGD KSSCPVFLIF SVNTSGQFVG LAEMMAECWQ QDKWVGCFPV
101: KCHIPVTNSR DTQEVKELFI FQQSFTASDK KATPKDKSKK TSVIAEVAEE ISQNGVAEVA STC
101: KCHIPVTNSR DTQEVKELFI FQQSFTASDK KATPKDKSKK TSVIAEVAEE ISQNGVAEVA STC
001: MANPDHVSDV LHNLSIDPTT KALAPDSETK LQGAYGGNGN DFLLNDELVE ATKIGKPSLL SKDGGVTKDK GSNLKKLGYQ SAAYNAKGSY GKGAYAYGYY
101: PPAYQYPRHG YTGSYASGKT NLQYQYLTQQ GRSAGNGQSY GGYMDNIYSN YGMCGPYTNG YGYGSYGYDS WKYMPNWYAV NNTYKPRNGY HGYGKENIEG
201: LNEMNRGPRA KGFNSQDGSK VMAVSLKEQR VTETEKLSED VSLLDPKDYN KIDFPETYTE AKFYVIKSYS EDDIHKSIKY SVWSSTPNGN KKLDASYNEA
301: KQKSDGCPVF LLFSVNTSGQ FVGLAEMVGP VDFNKTVEYW QQDKWIGCFP VKWHFVKDIP NSSLRHITLE NNENKPVTNS RDTQEVKLEQ GIKVIKIFKD
401: HASKTCILDD FEFYENRQKI IQERKSKHLQ IKKQTLVANA DKGVMSKINL VKPQESTTAS EDAAALGVAA EVTKESKVVK ETELPVEKNA VATAC
101: PPAYQYPRHG YTGSYASGKT NLQYQYLTQQ GRSAGNGQSY GGYMDNIYSN YGMCGPYTNG YGYGSYGYDS WKYMPNWYAV NNTYKPRNGY HGYGKENIEG
201: LNEMNRGPRA KGFNSQDGSK VMAVSLKEQR VTETEKLSED VSLLDPKDYN KIDFPETYTE AKFYVIKSYS EDDIHKSIKY SVWSSTPNGN KKLDASYNEA
301: KQKSDGCPVF LLFSVNTSGQ FVGLAEMVGP VDFNKTVEYW QQDKWIGCFP VKWHFVKDIP NSSLRHITLE NNENKPVTNS RDTQEVKLEQ GIKVIKIFKD
401: HASKTCILDD FEFYENRQKI IQERKSKHLQ IKKQTLVANA DKGVMSKINL VKPQESTTAS EDAAALGVAA EVTKESKVVK ETELPVEKNA VATAC
Arabidopsis Description
ECT3ECT3 [Source:UniProtKB/TrEMBL;Acc:A0A178UM32]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.