Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05744 | Canola | cytosol | 22.73 | 23.81 |
| Zm00001d038120_P001 | Maize | cytosol | 24.24 | 13.73 |
| Zm00001d032562_P001 | Maize | cytosol | 25.0 | 11.91 |
| CDY51902 | Canola | cytosol | 13.64 | 11.61 |
| Zm00001d051781_P001 | Maize | cytosol, extracellular | 20.45 | 10.76 |
| CDY57677 | Canola | mitochondrion | 13.64 | 10.53 |
| CDY50448 | Canola | cytosol | 15.91 | 8.24 |
| CDY43989 | Canola | nucleus | 37.88 | 7.89 |
| CDY69959 | Canola | nucleus | 23.48 | 7.77 |
| CDX75712 | Canola | nucleus | 37.12 | 7.73 |
| CDY23602 | Canola | nucleus | 36.36 | 7.69 |
| CDY21154 | Canola | nucleus | 23.48 | 7.62 |
| CDY50867 | Canola | nucleus | 22.73 | 7.5 |
| CDY42891 | Canola | nucleus | 22.73 | 7.5 |
| CDX82538 | Canola | nucleus | 36.36 | 7.5 |
| CDY07437 | Canola | nucleus | 23.48 | 7.36 |
| CDY29972 | Canola | nucleus | 22.73 | 7.32 |
| CDY39299 | Canola | nucleus | 22.73 | 7.09 |
| CDY56132 | Canola | nucleus | 23.48 | 6.94 |
| CDY24182 | Canola | nucleus | 28.03 | 6.84 |
| CDY52966 | Canola | cytosol | 22.73 | 6.7 |
| CDY22270 | Canola | cytosol | 21.21 | 6.25 |
| CDY56809 | Canola | cytosol | 21.21 | 6.25 |
| CDY58572 | Canola | nucleus | 23.48 | 6.11 |
| CDY07089 | Canola | nucleus | 28.79 | 5.97 |
| CDX87395 | Canola | cytosol | 19.7 | 5.86 |
| CDX88524 | Canola | cytosol | 18.94 | 5.66 |
| CDX68000 | Canola | nucleus | 21.21 | 5.5 |
| CDX88661 | Canola | nucleus | 21.21 | 5.49 |
| CDX79309 | Canola | nucleus | 20.45 | 5.3 |
| CDY02802 | Canola | nucleus | 21.21 | 5.24 |
| CDX94944 | Canola | nucleus | 18.94 | 5.03 |
| CDX90116 | Canola | nucleus | 19.7 | 4.99 |
| CDY67303 | Canola | nucleus | 19.7 | 4.99 |
| CDY32718 | Canola | nucleus | 19.7 | 4.91 |
| CDX91541 | Canola | mitochondrion | 6.06 | 4.91 |
| CDY43378 | Canola | nucleus | 22.73 | 4.89 |
| CDY24224 | Canola | nucleus | 22.73 | 4.89 |
| CDX93476 | Canola | nucleus | 18.18 | 4.8 |
| CDX93645 | Canola | nucleus | 21.21 | 4.58 |
| CDY23562 | Canola | nucleus | 21.21 | 4.52 |
| CDY11758 | Canola | nucleus, plastid | 18.94 | 4.51 |
| CDY44025 | Canola | nucleus | 21.21 | 4.5 |
| CDY43306 | Canola | cytosol | 20.45 | 4.4 |
Protein Annotations
| EnsemblPlants:CDY60520 | EnsemblPlantsGene:GSBRNA2T00029721001 | ProteinID:CDY60520 | ProteinID:CDY60520.1 | UniParc:UPI0004EE6A62 | UniProt:A0A078J3N7 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaAnng16880DBnaAnng16880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J3N7]
Coordinates
chrLK033889:-:14080..15362
Molecular Weight (calculated)
15258.7 Da
IEP (calculated)
10.454
GRAVY (calculated)
-0.898
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MKYMKKRENT YHPKSTDQYS SSCRKIQVGQ PRAKWGISRG SVSIDLQCES KPCPGLCKLK RMELILRSRL LKHEARSLLR HIVKDVPNGV LKHITLQKNE
101: DKPKTILEKK AKQHQTHKQV SEENIDVVEN GC
101: DKPKTILEKK AKQHQTHKQV SEENIDVVEN GC
001: MATVAPPADH LLQKLSLDSP AKASEIPEPN KKTAVYQYGG VDVHGQVPSY DRSLTPMLPS DAADPSVCYV PNPYNPYQYY NVYGSGQEWT DYPAYTNPEG
101: VDMNSGIYGE NGTVVYPQGY GYAAYPYSPA TSPAPQLGGE GQLYGAQQYQ YPNYFPNSGP YASSVATPTQ PDLSANKPAG VKTLPADSNN VASAAGITKG
201: SNGSAPVKPT NQATLNTSSN LYGMGAPGGG LAAGYQDPRY AYEGYYAPVP WHDGSKYSDV QRPVSGSGVA SSYSKSSTVP SSRNQNYRSN SHYTSVHQPS
301: SVTGYGTAQG YYNRMYQNKL YGQYGSTGRS ALGYGSSGYD SRTNGRGWAA TDNKYRSWGR GNSYYYGNEN NVDGLNELNR GPRAKGTKNQ KGNLDDSLEV
401: KEQTGESNVT EVGEADNTCV VPDREQYNKE DFPVDYANAM FFIIKSYSED DVHKSIKYNV WASTPNGNKK LAAAYQEAQQ KAGGCPIFLF FSVNASGQFV
501: GLAEMTGPVD FNTNVEYWQQ DKWTGSFPLK WHIVKDVPNS LLKHITLENN ENKPVTNSRD TQEVKLEQGL KIVKIFKEHS SKTCILDDFS FYEVRQKTIL
601: EKKAKQTQKQ VSEEKVTDEK KESATAESAS KESPAAVQTS SDVKVAENGS VAKPVTGDVV ANGC
101: VDMNSGIYGE NGTVVYPQGY GYAAYPYSPA TSPAPQLGGE GQLYGAQQYQ YPNYFPNSGP YASSVATPTQ PDLSANKPAG VKTLPADSNN VASAAGITKG
201: SNGSAPVKPT NQATLNTSSN LYGMGAPGGG LAAGYQDPRY AYEGYYAPVP WHDGSKYSDV QRPVSGSGVA SSYSKSSTVP SSRNQNYRSN SHYTSVHQPS
301: SVTGYGTAQG YYNRMYQNKL YGQYGSTGRS ALGYGSSGYD SRTNGRGWAA TDNKYRSWGR GNSYYYGNEN NVDGLNELNR GPRAKGTKNQ KGNLDDSLEV
401: KEQTGESNVT EVGEADNTCV VPDREQYNKE DFPVDYANAM FFIIKSYSED DVHKSIKYNV WASTPNGNKK LAAAYQEAQQ KAGGCPIFLF FSVNASGQFV
501: GLAEMTGPVD FNTNVEYWQQ DKWTGSFPLK WHIVKDVPNS LLKHITLENN ENKPVTNSRD TQEVKLEQGL KIVKIFKEHS SKTCILDDFS FYEVRQKTIL
601: EKKAKQTQKQ VSEEKVTDEK KESATAESAS KESPAAVQTS SDVKVAENGS VAKPVTGDVV ANGC
Arabidopsis Description
ECT2ECT2 [Source:UniProtKB/TrEMBL;Acc:A0A178VBC2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.