Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031960.1-P | Field mustard | nucleus | 94.74 | 95.45 |
| CDY50867 | Canola | nucleus | 89.47 | 89.25 |
| CDY42891 | Canola | nucleus | 89.47 | 89.25 |
| CDY29972 | Canola | nucleus | 81.95 | 79.76 |
| CDY21154 | Canola | nucleus | 81.2 | 79.61 |
| AT3G03950.3 | Thale cress | cytosol | 80.7 | 75.23 |
| CDY57677 | Canola | mitochondrion | 19.8 | 46.2 |
| CDY51902 | Canola | cytosol | 16.54 | 42.58 |
| CDY07437 | Canola | nucleus | 42.86 | 40.62 |
| CDY39299 | Canola | nucleus | 42.36 | 39.95 |
| CDY05744 | Canola | cytosol | 12.03 | 38.1 |
| CDY56132 | Canola | nucleus | 41.85 | 37.36 |
| CDX91541 | Canola | mitochondrion | 15.04 | 36.81 |
| CDY50448 | Canola | cytosol | 23.31 | 36.47 |
| CDY52966 | Canola | cytosol | 40.85 | 36.38 |
| GSMUA_Achr4P14820_001 | Banana | cytosol | 27.57 | 33.23 |
| GSMUA_Achr7P01490_001 | Banana | nucleus | 44.36 | 31.61 |
| CDY23602 | Canola | nucleus | 48.62 | 31.09 |
| CDY43989 | Canola | nucleus | 48.87 | 30.76 |
| CDX82538 | Canola | nucleus | 48.37 | 30.16 |
| CDX75712 | Canola | nucleus | 47.37 | 29.81 |
| CDY22270 | Canola | cytosol | 33.08 | 29.46 |
| CDY56809 | Canola | cytosol | 32.83 | 29.24 |
| EER93313 | Sorghum | cytosol | 41.35 | 28.85 |
| CDX87395 | Canola | cytosol | 32.08 | 28.83 |
| GSMUA_Achr4P22630_001 | Banana | nucleus | 44.86 | 28.82 |
| CDX88524 | Canola | cytosol | 31.83 | 28.73 |
| CDY07089 | Canola | nucleus | 45.61 | 28.62 |
| EER93461 | Sorghum | nucleus | 47.12 | 28.53 |
| GSMUA_Achr4P21380_001 | Banana | nucleus | 46.87 | 28.42 |
| GSMUA_Achr5P02830_001 | Banana | cytosol | 43.86 | 28.41 |
| Zm00001d034005_P003 | Maize | plasma membrane | 46.62 | 28.18 |
| Os03t0748000-01 | Rice | plasma membrane | 46.62 | 28.14 |
| CDY24182 | Canola | nucleus | 38.1 | 28.1 |
| TraesCS5D01G396400.3 | Wheat | nucleus | 46.37 | 27.95 |
| VIT_08s0007g07450.t01 | Wine grape | cytosol | 48.37 | 27.81 |
| TraesCS5B01G391500.1 | Wheat | nucleus | 46.12 | 27.79 |
| TraesCS5A01G386600.2 | Wheat | nucleus | 46.12 | 27.75 |
| GSMUA_Achr7P27220_001 | Banana | cytosol | 45.86 | 27.69 |
| HORVU5Hr1G094950.6 | Barley | cytosol, nucleus | 45.86 | 27.52 |
| Os07t0170300-01 | Rice | plasma membrane | 40.85 | 27.08 |
| GSMUA_Achr4P28430_001 | Banana | nucleus, plastid | 41.35 | 26.83 |
| KRH70155 | Soybean | nucleus | 42.36 | 26.83 |
| TraesCS5D01G439100.1 | Wheat | nucleus | 39.35 | 26.7 |
| TraesCS5A01G431200.1 | Wheat | nucleus | 39.35 | 26.66 |
| TraesCS5B01G433000.1 | Wheat | cytosol | 39.35 | 26.34 |
| CDX68000 | Canola | nucleus | 33.58 | 26.33 |
| CDX79309 | Canola | nucleus | 33.33 | 26.13 |
| KRG94807 | Soybean | nucleus | 43.11 | 26.1 |
| CDX88661 | Canola | nucleus | 33.33 | 26.08 |
| CDY58572 | Canola | nucleus | 33.08 | 26.04 |
| CDY67303 | Canola | nucleus | 33.83 | 25.91 |
| CDX90116 | Canola | nucleus | 33.83 | 25.91 |
| KXG40139 | Sorghum | plastid | 45.61 | 25.6 |
| CDX94944 | Canola | nucleus | 31.83 | 25.55 |
| KRH06717 | Soybean | nucleus | 42.36 | 25.49 |
| CDY23562 | Canola | nucleus | 39.6 | 25.48 |
| Os03t0158500-01 | Rice | nucleus | 45.11 | 25.46 |
| TraesCS5A01G431100.1 | Wheat | cytosol | 40.6 | 25.23 |
| KXG34475 | Sorghum | cytosol | 40.85 | 25.23 |
| CDY32718 | Canola | nucleus | 33.33 | 25.14 |
| CDY02802 | Canola | nucleus | 33.58 | 25.09 |
| TraesCS5D01G439200.1 | Wheat | cytosol | 40.35 | 25.08 |
| CDY44025 | Canola | nucleus | 38.85 | 24.92 |
| TraesCS5B01G432900.2 | Wheat | extracellular | 40.35 | 24.85 |
| CDX93476 | Canola | nucleus | 31.08 | 24.8 |
| CDY24224 | Canola | nucleus | 38.1 | 24.76 |
| CDY43378 | Canola | nucleus | 38.1 | 24.76 |
| CDY11758 | Canola | nucleus, plastid | 34.09 | 24.55 |
| Zm00001d007890_P002 | Maize | mitochondrion | 40.1 | 24.5 |
| TraesCS4D01G273200.4 | Wheat | cytosol | 43.61 | 24.07 |
| HORVU5Hr1G104380.1 | Barley | plastid | 39.85 | 24.05 |
| TraesCS4A01G031600.2 | Wheat | cytosol | 43.86 | 24.01 |
| HORVU4Hr1G072940.4 | Barley | cytosol | 44.36 | 23.85 |
| Zm00001d048424_P003 | Maize | plastid | 43.86 | 23.65 |
| CDY60520 | Canola | cytosol | 7.77 | 23.48 |
| TraesCS4B01G274500.2 | Wheat | plastid | 44.61 | 23.21 |
| Zm00001d018896_P002 | Maize | mitochondrion | 40.85 | 23.09 |
| HORVU5Hr1G104390.3 | Barley | plastid | 38.85 | 22.53 |
| Zm00001d027731_P012 | Maize | plastid | 45.11 | 22.42 |
| CDY43306 | Canola | cytosol | 32.58 | 21.21 |
| CDX93645 | Canola | nucleus | 32.33 | 21.08 |
Protein Annotations
| EnsemblPlants:CDY69959 | EnsemblPlantsGene:GSBRNA2T00093699001 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF56 | PFAM:PF04146 |
| PFscan:PS50882 | ProteinID:CDY69959 | ProteinID:CDY69959.1 | SEG:seg | UniParc:UPI0004EE134C | UniProt:A0A078JT01 |
| MapMan:16.5.2.1 | : | : | : | : | : |
Description
BnaAnng32160DBnaAnng32160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JT01]
Coordinates
chrLK040767:+:840..2710
Molecular Weight (calculated)
45361.3 Da
IEP (calculated)
6.615
GRAVY (calculated)
-0.832
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGASSSSDS FPLLETADWF QELSLGSDAS EVPRNHYKGS LQNQYGHVPS GAYTAPSSHG NERRPSMNGG DPFGSYPWGY HPSGGYQDQS FGYGHNNNSN
101: TLSHLMMDPH NSSFDQFGYS DHLYSNHGLY GLYGNVIDSG HAYGTFGYDS WKLGRGWYPV DGYRKTKSFN YARGYSEEKA DRLNELCRGP RSSDVKKQDA
201: PVVDLHRYNG ENFPETFTKE RFFVIKSYSE DDVHNSIKHG VWSSTPTGNK KLNAAYYEAQ EEECPVYLLF SVNASGQFVG VAEMTGPVDF NKTVEYWQQD
301: KWIGCFPVKW HIIKDVPNSF LRHVTIANNE NKPVTNSRDT QEVNVEDGTK IIKIFKEYMS KTCILDDFKF YETRQKMIRD KKIKQKKQVP DGASVETIH
101: TLSHLMMDPH NSSFDQFGYS DHLYSNHGLY GLYGNVIDSG HAYGTFGYDS WKLGRGWYPV DGYRKTKSFN YARGYSEEKA DRLNELCRGP RSSDVKKQDA
201: PVVDLHRYNG ENFPETFTKE RFFVIKSYSE DDVHNSIKHG VWSSTPTGNK KLNAAYYEAQ EEECPVYLLF SVNASGQFVG VAEMTGPVDF NKTVEYWQQD
301: KWIGCFPVKW HIIKDVPNSF LRHVTIANNE NKPVTNSRDT QEVNVEDGTK IIKIFKEYMS KTCILDDFKF YETRQKMIRD KKIKQKKQVP DGASVETIH
001: MAGAASSDRL VTSFPLLDTA DLFQDLSLGS DANEVPMNFT KGSFQHPYGH APYGASSHGS ERRPNMNAGN LLNGGDSIGS YPWGYIPANY PSGGYPDPRF
101: GYDRNSNHSS FSHLMNPHSS QEVPSFDQLG YNDHLYSNHG LYGLYGNVID SGHAYGTFGY DSWKLGRGWY PVDGYRKTRS FNHGRGYSDE KADRLNELCR
201: GPRSSDFKNP QVLNSSMLDA MKQDVSAVDL QRYNGENFPE SFVKAKFFVI KSYSEDDVHN CIKYGAWSST PTGNKKLNAA YYEAKENSQE CPVYLLFSVN
301: ASGQFVGLAE MVGPVDFNKT MEYWQQDKWI GCFPVKWHII KDIPNSLLRH ITLANNENKP VTNSRDTQEV NLEHGTKIIK IFKEYMSKTC ILDDYKFYET
401: RQKIIRDKKI KQKKQALDGA SGETINLS
101: GYDRNSNHSS FSHLMNPHSS QEVPSFDQLG YNDHLYSNHG LYGLYGNVID SGHAYGTFGY DSWKLGRGWY PVDGYRKTRS FNHGRGYSDE KADRLNELCR
201: GPRSSDFKNP QVLNSSMLDA MKQDVSAVDL QRYNGENFPE SFVKAKFFVI KSYSEDDVHN CIKYGAWSST PTGNKKLNAA YYEAKENSQE CPVYLLFSVN
301: ASGQFVGLAE MVGPVDFNKT MEYWQQDKWI GCFPVKWHII KDIPNSLLRH ITLANNENKP VTNSRDTQEV NLEHGTKIIK IFKEYMSKTC ILDDYKFYET
401: RQKIIRDKKI KQKKQALDGA SGETINLS
Arabidopsis Description
ECT1AT3G03950 protein [Source:UniProtKB/TrEMBL;Acc:Q3MK94]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.