CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1
nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94807	Soybean	nucleus	91.25	91.81
KRH70155	Soybean	nucleus	63.95	67.3
CDY57677	Canola	mitochondrion	12.82	49.71
VIT_08s0007g07450.t01	Wine grape	cytosol	49.17	46.97
GSMUA_Achr7P01490_001	Banana	nucleus	39.22	46.43
CDY07437	Canola	nucleus	28.96	45.61
GSMUA_Achr4P22630_001	Banana	nucleus	42.53	45.41
KRH26322	Soybean	cytosol	8.75	45.31
CDY39299	Canola	nucleus	28.66	44.92
CDY50448	Canola	cytosol	17.19	44.71
CDY56132	Canola	nucleus	30.02	44.52
GSMUA_Achr5P02830_001	Banana	cytosol	41.33	44.48
Bra004105.1-P	Field mustard	nucleus	26.55	44.44
GSMUA_Achr4P14820_001	Banana	cytosol	22.02	44.11
GSMUA_Achr4P21380_001	Banana	nucleus	43.74	44.07
CDY52966	Canola	cytosol	29.71	43.97
Bra008509.1-P	Field mustard	cytosol	28.05	43.97
GSMUA_Achr4P28430_001	Banana	nucleus, plastid	39.67	42.76
KRH43005	Soybean	nucleus	45.55	42.72
CDY69959	Canola	nucleus	25.49	42.36
GSMUA_Achr7P27220_001	Banana	cytosol	41.63	41.75
KRH59123	Soybean	nucleus	44.49	41.67
Bra031960.1-P	Field mustard	nucleus	24.89	41.67
AT3G03950.3	Thale cress	cytosol	26.85	41.59
CDY21154	Canola	nucleus	25.34	41.28
CDY50867	Canola	nucleus	24.89	41.25
CDY42891	Canola	nucleus	24.89	41.25
Bra036423.1-P	Field mustard	nucleus	25.19	41.13
CDX91541	Canola	mitochondrion	10.11	41.1
CDY29972	Canola	nucleus	25.34	40.98
AT5G61020.1	Thale cress	cytosol	30.32	40.61
Os03t0748000-01	Rice	plasma membrane	39.82	39.94
EER93461	Sorghum	nucleus	39.22	39.45
EER93313	Sorghum	cytosol	33.63	38.99
TraesCS5D01G396400.3	Wheat	nucleus	38.91	38.97
TraesCS5B01G391500.1	Wheat	nucleus	38.91	38.97
TraesCS5A01G386600.2	Wheat	nucleus	38.91	38.91
HORVU5Hr1G094950.6	Barley	cytosol, nucleus	38.76	38.65
Zm00001d034005_P003	Maize	plasma membrane	38.46	38.64
Os03t0158500-01	Rice	nucleus	39.97	37.48
TraesCS5B01G433000.1	Wheat	cytosol	33.48	37.25
TraesCS5D01G439100.1	Wheat	nucleus	32.73	36.9
TraesCS5A01G431200.1	Wheat	nucleus	32.73	36.84
KXG40139	Sorghum	plastid	39.22	36.57
KRH36908	Soybean	cytosol	24.28	36.26
Os07t0170300-01	Rice	plasma membrane	32.58	35.88
KXG34475	Sorghum	cytosol	34.39	35.29
TraesCS4D01G273200.4	Wheat	cytosol	38.46	35.27
TraesCS4A01G031600.2	Wheat	cytosol	38.16	34.71
TraesCS5A01G431100.1	Wheat	cytosol	33.48	34.58
HORVU4Hr1G072940.4	Barley	cytosol	38.46	34.37
Zm00001d007890_P002	Maize	mitochondrion	33.63	34.15
Zm00001d048424_P003	Maize	plastid	38.01	34.05
TraesCS5D01G439200.1	Wheat	cytosol	32.88	33.96
TraesCS5B01G432900.2	Wheat	extracellular	33.18	33.95
TraesCS4B01G274500.2	Wheat	plastid	38.91	33.64
Bra014253.1-P	Field mustard	cytosol	14.93	33.22
Bra018951.1-P	Field mustard	cytosol	12.97	33.2
HORVU5Hr1G104380.1	Barley	plastid	33.03	33.13
Zm00001d027731_P012	Maize	plastid	38.76	32.01
Zm00001d018896_P002	Maize	mitochondrion	33.79	31.73
HORVU5Hr1G104390.3	Barley	plastid	32.73	31.54
KRH43645	Soybean	nucleus	26.85	30.74
Bra038524.1-P	Field mustard	cytosol	10.41	30.67
KRH13810	Soybean	nucleus, plastid	26.24	30.16
KRH46969	Soybean	endoplasmic reticulum, extracellular	29.41	30.14
KRH44697	Soybean	mitochondrion	29.56	29.79
KRH02430	Soybean	cytosol	27.9	26.66
KRH50636	Soybean	cytosol	27.75	26.47
KRH11876	Soybean	endoplasmic reticulum	27.0	25.54
KRH06073	Soybean	cytosol, nucleus, peroxisome	17.95	23.99

Protein Annotations

EMBL:ACUP02009864	EnsemblPlants:KRH06717	EnsemblPlantsGene:GLYMA_16G041600	EntrezGene:100803547	Gene3D:3.10.590.10	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357
PANTHER:PTHR12357:SF56	PFAM:PF04146	PFscan:PS50882	ProteinID:KRH06717	ProteinID:KRH06717.1	SEG:seg
UniParc:UPI000233EBED	UniProt:I1ML30	MapMan:16.5.2.1	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:3904131..3908552

Molecular Weight (calculated)

72125.5 Da

IEP (calculated)

7.523

GRAVY (calculated)

-0.681

Length

663 amino acids

Sequence
(BLAST)

001: MAAVAPSSDK TADLLQNLTL DSESKPIGVA EPAKKNGPTF SSGAAKGRAK PFNPNSCFVP NGYPSAYYYG GYDGQGDWNA YSRYMNLDGG MAQGVYGDNC
101: SYMYHQGYGY APYGTYASPN SSSPMIQQDG QQYGLQQYQY PCSYYKSPAS ADVSFTTNKI SLPEGEISTT VDVADCVSST NAMNKGNNVN VGNSNFTDKN
201: GLNPFLTSSQ HTSLNTNDSY QGASLPAYAP LSGYQGPRST HGTQLPVPSD ASLVSDGQAK YGAKVGLSSS VVPVKDFSSQ RNQRLPQPLP QYSNMSGSRH
301: PSGLDLVSGF MNGMYPSNRM YSQYGNTFRP NSHFGSAAYG SRMGSFDSKH NGAGYGCGLN HFKKSMDGFS ELNKGPRAAK SSDNKNIKSL GPVTLLHKGQ
401: NLSVKSDNKE VPLVPDKEQY NGKDLAENYS DAKFFVIKSY SEDDIHKSIK YSAWASTPNG NKKLDSAYQE AKEKPGGCPI FLLFSVNTSG QFVGLAEMLG
501: PVDFGKTVDY WQQDRWTGCF SVKWHVIKDI PNSVLRHITL ENNENKPVTN SRDTQEVKFE KGVQLVKIFK EHSSQTCILD DFGFYEDREK VTQEKKSKEQ
601: QLPKQISKPS DFTFGTVTFP KSLDATLINE SATANAADGR MNAEGLLEGN GSTTALEDAS KSC

Best Arabidopsis Sequence Match ( AT1G55500.2 )
(BLAST)

001: MSTVAPPADQ AADVLKKLSL DSKSRTLEIP EPTKKTGVYQ YGAMDSNGQV PSFDRSLSPM LPSDALDPSV FYVPNVYQQP YYYGYGSDYT GYTNSESVDM
101: TSGAYGENAS LVYPQGYGYA AFPYSPATSP APQLGGDGQL YGAQQYQYPF PLTASSGPFA SSVPASTQSK LSTNKAANSA SAGIPKGMNG SAPVKPLNQS
201: ALYGNSALGG GLAAGYQDPR YSYDGFYTPV SWHDGSNFSD VQRSVSGSGV ASSYSKANNN VPATRNQNSS SNSHYTSMYQ PASMTGYAAQ GYYDRVSPNK
301: SYGQYGSTVR SGMGYGSSGY GSRTNERGWL NTDNKYRSRG RGNSYFYGNE NIDGLNELNR GPRAKGTKAT EEVSSEEVKK QTFDESNTEE TVTCVLPDRE
401: ECNRDDFPVE YKDAKFFIIK SYSEDDVHKS IKYNVWASTP NGNKKLDAAY QEAQQKSSGC PVFLFFSVNA SGQFIGLAEM KGPVDFNKNI EYWQQDKWTG
501: SFPLKWHILK DVPNSLLKHI TLEYNENKPV TNSRDTQEVK LEQGLKVVKI FKEHNSKTCI LDDFSFYEAR QKTILEKKAK QQQSQKQARE ENGLGRKNQ

Arabidopsis Description

ECT4evolutionarily conserved C-terminal region 4 [Source:TAIR;Acc:AT1G55500]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.