CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06073	Soybean	cytosol, nucleus, peroxisome	92.19	23.79
GSMUA_Achr6P12810_001	Banana	nucleus	60.16	21.88
AT1G09810.1	Thale cress	nucleus	56.25	15.32
KRH36908	Soybean	cytosol	52.34	15.09
CDX94944	Canola	nucleus	57.03	14.69
CDX93476	Canola	nucleus	56.25	14.4
Bra019988.1-P	Field mustard	nucleus	56.25	14.37
PGSC0003DMT400064041	Potato	cytosol	57.03	12.81
Solyc01g103540.2.1	Tomato	nucleus	55.47	12.79
KRH13810	Soybean	nucleus, plastid	54.69	12.13
KRH43645	Soybean	nucleus	53.91	11.92
VIT_12s0035g00970.t01	Wine grape	plastid	64.06	11.58
Os05t0105600-01	Rice	cytosol	51.56	10.34
KRH46969	Soybean	endoplasmic reticulum, extracellular	51.56	10.2
KXG21015	Sorghum	nucleus	51.56	10.11
Os04t0129300-01	Rice	nucleus	53.12	10.07
KRH50636	Soybean	cytosol	53.91	9.93
KRH44697	Soybean	mitochondrion	50.78	9.88
KRH02430	Soybean	cytosol	53.12	9.8
KRH11876	Soybean	endoplasmic reticulum	53.12	9.7
HORVU2Hr1G023660.2	Barley	nucleus	52.34	9.45
TraesCS2D01G012200.1	Wheat	cytosol	52.34	9.44
TraesCS2A01G011400.1	Wheat	nucleus	52.34	9.42
TraesCS2B01G010200.1	Wheat	cytosol	52.34	9.38
KRH43005	Soybean	nucleus	51.56	9.34
KRG94807	Soybean	nucleus	47.66	9.26
KRH59123	Soybean	nucleus	50.78	9.18
Zm00001d048501_P002	Maize	cytosol	52.34	8.84
KRH06717	Soybean	nucleus	45.31	8.75
KRH70155	Soybean	nucleus	42.97	8.73
HORVU2Hr1G001810.8	Barley	cytosol	53.12	8.63

Protein Annotations

EMBL:ACUP02007706	EnsemblPlants:KRH26322	EnsemblPlantsGene:GLYMA_12G167200	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357	PANTHER:PTHR12357:SF56
PFAM:PF04146	PFscan:PS50882	ProteinID:KRH26322	ProteinID:KRH26322.1	UniParc:UPI0006EDCF52	UniProt:A0A0R0HD09
MapMan:16.5.2.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:32158768..32161717

Molecular Weight (calculated)

14597.5 Da

IEP (calculated)

9.110

GRAVY (calculated)

-0.356

Length

128 amino acids

Sequence
(BLAST)

001: MEMTRGPRGR YNNFLLKPSL VKDALVITIC KDEYNLSDFQ TEYETAKFNV IKSFNEDEVH KSVKYNVWTS TPNGNKKLNA AFLDAEAKLR PTGTKCPVFL
101: FFSVNASRQF VGVAEILGPV DFKKDMNF

Best Arabidopsis Sequence Match ( AT1G09810.2 )
(BLAST)

001: MHFAGSDVVS SQPNDNGQAH TTDFRKGNHR DKNSSDVYAD STLRGDRPKG SNCLSQTSFS APKPLGNFNG AGRLPPNTQA HAFRPPFKGK EAAGQFLTFS
101: NQKTSCVPYS GYINGNSNNG FWDQRDHNKK PERNGESDYL VELKCGPRAN AKTRPPSESS PLKQNNSFAL ALRREMYNLP DFQTDYEDAK FFVIKSYSED
201: DVHKSIKYSV WSSTINGNKK LDAAFRDAET KTLEDGKKRP IFLFFSVNAS RQFVGLAEMV GYVDFNKDLD FWQVDKWSGF FPVEWHVVKD IPNWELRHII
301: LDNNEDKPVT HTRDTHEIKL KEGLQMLSIF KKYSAVTFLL DDMDFYEERE KSLRAKKEHK PATLRMDLFK EKDYDYEMEG NRRMNHQERG YNWNRSSNSK
401: TQASLVNQTK YLSIRGYSGY KKNTGNST

Arabidopsis Description

ECT11Evolutionarily conserved C-terminal region 11 [Source:UniProtKB/TrEMBL;Acc:Q56XH8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.