Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26322 | Soybean | cytosol | 21.88 | 60.16 |
| KRH06073 | Soybean | cytosol, nucleus, peroxisome | 43.18 | 30.65 |
| AT1G09810.1 | Thale cress | nucleus | 38.64 | 28.94 |
| Solyc01g103540.2.1 | Tomato | nucleus | 43.47 | 27.57 |
| GSMUA_Achr4P14820_001 | Banana | cytosol | 25.85 | 27.49 |
| PGSC0003DMT400064041 | Potato | cytosol | 44.03 | 27.19 |
| CDX94944 | Canola | nucleus | 38.07 | 26.96 |
| Bra019988.1-P | Field mustard | nucleus | 38.35 | 26.95 |
| CDX93476 | Canola | nucleus | 37.5 | 26.4 |
| GSMUA_Achr1P10560_001 | Banana | nucleus | 32.39 | 25.62 |
| GSMUA_Achr7P01490_001 | Banana | nucleus | 36.93 | 23.21 |
| VIT_12s0035g00970.t01 | Wine grape | plastid | 46.59 | 23.16 |
| Os05t0105600-01 | Rice | cytosol | 41.76 | 23.04 |
| GSMUA_Achr9P06180_001 | Banana | endoplasmic reticulum, plasma membrane | 39.77 | 22.62 |
| KXG21015 | Sorghum | nucleus | 41.48 | 22.36 |
| GSMUA_Achr6P26690_001 | Banana | cytosol | 38.35 | 22.17 |
| Os04t0129300-01 | Rice | nucleus | 40.91 | 21.33 |
| TraesCS2D01G012200.1 | Wheat | cytosol | 42.33 | 20.99 |
| TraesCS2A01G011400.1 | Wheat | nucleus | 42.33 | 20.96 |
| HORVU2Hr1G023660.2 | Barley | nucleus | 42.05 | 20.87 |
| TraesCS2B01G010200.1 | Wheat | cytosol | 42.33 | 20.87 |
| GSMUA_Achr4P12480_001 | Banana | cytosol | 33.81 | 20.48 |
| GSMUA_Achr4P22630_001 | Banana | nucleus | 36.08 | 20.45 |
| GSMUA_Achr7P27220_001 | Banana | cytosol | 37.22 | 19.82 |
| GSMUA_Achr4P21380_001 | Banana | nucleus | 36.93 | 19.76 |
| GSMUA_Achr4P28430_001 | Banana | nucleus, plastid | 34.38 | 19.67 |
| GSMUA_Achr5P02830_001 | Banana | cytosol | 34.09 | 19.48 |
| GSMUA_Achr4P11560_001 | Banana | nucleus | 35.8 | 19.41 |
| HORVU2Hr1G001810.8 | Barley | cytosol | 42.61 | 19.04 |
| Zm00001d048501_P002 | Maize | cytosol | 39.77 | 18.47 |
| GSMUA_Achr4P04600_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 35.51 | 16.21 |
| GSMUA_Achr1P24980_001 | Banana | nucleus | 36.08 | 15.3 |
| GSMUA_Achr8P29890_001 | Banana | cytosol | 34.09 | 14.8 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P12810_001 | EnsemblPlants:GSMUA_Achr6T12810_001 | EnsemblPlantsGene:GSMUA_Achr6G12810_001 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF62 |
| PFAM:PF04146 | PFscan:PS50882 | UniParc:UPI000296B1D9 | UniProt:M0T6H9 | MapMan:16.5.2.1 | : |
Description
ECT protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G12810_001]
Coordinates
chr6:-:8566890..8571535
Molecular Weight (calculated)
40467.7 Da
IEP (calculated)
9.268
GRAVY (calculated)
-0.612
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPKADSAFD LDEERVAPNL SSSLQAVEAA QGFSHGRGRI IPSLSNERQD GFFYRDNHMN LRRTAQAVHG HNHFGVNKKY SSHKTFEVSR ELVHGPRANK
101: SNSCLGSSTR NNNLNQFVRR DKYNKTDFQI EYENAKFFMI KSYNEDDVHK SVKYNVWAST PNGNKKLDAV FWDAERLMKK GSKCPIFLFF SVNASGQFVG
201: LAEMIGPVDF NKNLDFWQKE TWNGFFPVKW HIIKDIPNRL FQSIRLENND NKAVTFSKDT QEVSFSLSCI ERFPIMQVLL GQQFTVIGLP QGLQMLHIFK
301: GHPLGTSLLD DFGFYEQREK SLQATRRRRP AVMDVDFEFY DDSCGKIGSN SK
101: SNSCLGSSTR NNNLNQFVRR DKYNKTDFQI EYENAKFFMI KSYNEDDVHK SVKYNVWAST PNGNKKLDAV FWDAERLMKK GSKCPIFLFF SVNASGQFVG
201: LAEMIGPVDF NKNLDFWQKE TWNGFFPVKW HIIKDIPNRL FQSIRLENND NKAVTFSKDT QEVSFSLSCI ERFPIMQVLL GQQFTVIGLP QGLQMLHIFK
301: GHPLGTSLLD DFGFYEQREK SLQATRRRRP AVMDVDFEFY DDSCGKIGSN SK
001: MATEKNTLDS EATFAQTVPA LDSTTKKQDE SPPKSTPSLT VTACANGSDV VSSQPNDNGQ AHTTDFRKGN HRDKNSSDVY ADSTLRGDRP KGSNCLSQTS
101: FSAPKPLGNF NGAGRLPPNT QAHAFRPPFK GKEAAGQFLT FSNQKTSCVP YSGYINGNSN NGFWDQRDHN KKPERNGESD YLVELKCGPR ANAKTRPPSE
201: SSPLKQNNSF ALALRREMYN LPDFQTDYED AKFFVIKSYS EDDVHKSIKY SVWSSTINGN KKLDAAFRDA ETKTLEDGKK RPIFLFFSVN ASRQFVGLAE
301: MVGYVDFNKD LDFWQVDKWS GFFPVEWHVV KDIPNWELRH IILDNNEDKP VTHTRDTHEI KLKEGLQMLS IFKKYSAVTF LLDDMDFYEE REKSLRAKKE
401: HKPATLRMDL FKEKDYDYEM EGNRRMNHQE RGYNWNRSSN SKTQASLVNQ TKYLSIRGYS GYKKNTGNST
101: FSAPKPLGNF NGAGRLPPNT QAHAFRPPFK GKEAAGQFLT FSNQKTSCVP YSGYINGNSN NGFWDQRDHN KKPERNGESD YLVELKCGPR ANAKTRPPSE
201: SSPLKQNNSF ALALRREMYN LPDFQTDYED AKFFVIKSYS EDDVHKSIKY SVWSSTINGN KKLDAAFRDA ETKTLEDGKK RPIFLFFSVN ASRQFVGLAE
301: MVGYVDFNKD LDFWQVDKWS GFFPVEWHVV KDIPNWELRH IILDNNEDKP VTHTRDTHEI KLKEGLQMLS IFKKYSAVTF LLDDMDFYEE REKSLRAKKE
401: HKPATLRMDL FKEKDYDYEM EGNRRMNHQE RGYNWNRSSN SKTQASLVNQ TKYLSIRGYS GYKKNTGNST
Arabidopsis Description
ECT11Evolutionarily conserved C-terminal region 11 [Source:UniProtKB/TrEMBL;Acc:Q56XH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.