Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d048501_P002 | Maize | cytosol | 79.79 | 68.73 |
| Os05t0105600-01 | Rice | cytosol | 57.89 | 59.25 |
| KRH26322 | Soybean | cytosol | 10.11 | 51.56 |
| HORVU2Hr1G023660.2 | Barley | nucleus | 55.13 | 50.78 |
| TraesCS2D01G012200.1 | Wheat | cytosol | 54.52 | 50.14 |
| TraesCS2A01G011400.1 | Wheat | nucleus | 54.52 | 50.07 |
| TraesCS2B01G010200.1 | Wheat | cytosol | 54.21 | 49.58 |
| Os04t0129300-01 | Rice | nucleus | 49.77 | 48.15 |
| HORVU2Hr1G001810.8 | Barley | cytosol | 54.98 | 45.56 |
| GSMUA_Achr6P12810_001 | Banana | nucleus | 22.36 | 41.48 |
| KRH06073 | Soybean | cytosol, nucleus, peroxisome | 21.9 | 28.83 |
| AT1G09810.1 | Thale cress | nucleus | 20.37 | 28.3 |
| Solyc01g103540.2.1 | Tomato | nucleus | 24.04 | 28.29 |
| KXG27074 | Sorghum | cytosol | 23.89 | 28.26 |
| PGSC0003DMT400064041 | Potato | cytosol | 24.5 | 28.07 |
| EER93313 | Sorghum | cytosol | 23.89 | 27.27 |
| CDX94944 | Canola | nucleus | 20.67 | 27.16 |
| EER93461 | Sorghum | nucleus | 27.26 | 27.01 |
| Bra019988.1-P | Field mustard | nucleus | 20.52 | 26.75 |
| EES14722 | Sorghum | nucleus | 24.04 | 26.43 |
| CDX93476 | Canola | nucleus | 20.21 | 26.4 |
| KXG25412 | Sorghum | cytosol | 24.66 | 25.2 |
| KXG34475 | Sorghum | cytosol | 24.81 | 25.08 |
| KXG40139 | Sorghum | plastid | 26.8 | 24.61 |
| VIT_12s0035g00970.t01 | Wine grape | plastid | 25.57 | 23.59 |
| OQU87332 | Sorghum | mitochondrion, nucleus | 23.74 | 23.1 |
| KXG24185 | Sorghum | nucleus | 19.3 | 17.19 |
| OQU77486 | Sorghum | cytosol | 18.38 | 16.95 |
Protein Annotations
| EnsemblPlants:KXG21015 | EnsemblPlantsGene:SORBI_3009G004300 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF35 | PFAM:PF04146 |
| PFscan:PS50882 | ProteinID:KXG21015 | ProteinID:KXG21015.1 | SEG:seg | UniParc:UPI00081AE518 | UniProt:A0A1B6P5T4 |
| MapMan:16.5.2.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:377484..383567
Molecular Weight (calculated)
75124.4 Da
IEP (calculated)
7.410
GRAVY (calculated)
-0.897
Length
653 amino acids
Sequence
(BLAST)
(BLAST)
001: MQEVFDPPET ERKAETKIGT TIKKDVIVQQ DSCSSYQLWG SMQFEEDGHL LSQTKRDLSH LDYQAQFVDT KYVTELGSHA CSKDPLPLGR DYHRQKPHFP
101: TSACSWEKSS ALEAASSSPD ALGHALGTMR TKTNTISARP DYLASYPASA PHMRKCPGAV ELDYGLDHSE HCYRRSDRFT SFSSRNGRSV EHCKEMVEYA
201: RGSRYADEIN PAPCQWCFED EIPSLSRKKY DEAPSVPRGL QYGDEIPSLS RKKYDEAPSV PRGLQYGDEI PSLSRKKYDE APSRSRQWHY GPQTAMSSGR
301: LDYGDEIPSL SLHHGYRDRI PLRSGHWCHD AEARILSRYQ QGTSHGNNHS RQNFARINTN EQAKVITSKH SFAKPRVVNR VVNSSNHHMF NMKGNHWRNS
401: EDLRDQVRGP RANKLNNASV SSTVKDIISP LIRRNQYNRS DFSIQYKQAK FFMIKSYSED DIHKGIKYNV WASTPNGNNK LDAAYHEAQN LMNENGERCP
501: VFLFFSVNTS GQFVGLAEML GPVDFKKTMD FWEEDKWNGF FPIKWHIIKD VPNRLFKHII LENNDNRQVT FSRDTQEIGL PQGVQMLKIF KDHPQGTSIL
601: DDFDFYEEKA NARRAEKRGN SESTYEARFS DDLKPMENLE ASMESWSLFE NWE
101: TSACSWEKSS ALEAASSSPD ALGHALGTMR TKTNTISARP DYLASYPASA PHMRKCPGAV ELDYGLDHSE HCYRRSDRFT SFSSRNGRSV EHCKEMVEYA
201: RGSRYADEIN PAPCQWCFED EIPSLSRKKY DEAPSVPRGL QYGDEIPSLS RKKYDEAPSV PRGLQYGDEI PSLSRKKYDE APSRSRQWHY GPQTAMSSGR
301: LDYGDEIPSL SLHHGYRDRI PLRSGHWCHD AEARILSRYQ QGTSHGNNHS RQNFARINTN EQAKVITSKH SFAKPRVVNR VVNSSNHHMF NMKGNHWRNS
401: EDLRDQVRGP RANKLNNASV SSTVKDIISP LIRRNQYNRS DFSIQYKQAK FFMIKSYSED DIHKGIKYNV WASTPNGNNK LDAAYHEAQN LMNENGERCP
501: VFLFFSVNTS GQFVGLAEML GPVDFKKTMD FWEEDKWNGF FPIKWHIIKD VPNRLFKHII LENNDNRQVT FSRDTQEIGL PQGVQMLKIF KDHPQGTSIL
601: DDFDFYEEKA NARRAEKRGN SESTYEARFS DDLKPMENLE ASMESWSLFE NWE
001: MDSNGQVPSF DRSLSPMLPS DALDPSVFYV PNVYQQPYYY GYGSDYTGYT NSESVDMTSG YGYAAFPYSP ATSPAPQLGG DGQLYGAQQY QYPFPLTASS
101: GPFASSVPAS TQSKLSTNKA ANSASAGIPK GMNGSAPVKP LNQSALYGNS ALGGGLAAGY QDPRYSYDGF YTPVSWHDGS NFSDVQRSVS GSGVASSYSK
201: ANNNVPATRN QNSSSNSHYT SMYQPASMTG YAAQGYYDRV SPNKSYGQYG STVRSGMGYG SSGYGSRTNE RGWLNTDNKY RSRGRGNSYF YGNENIDGLN
301: ELNRGPRAKG TKATEEVSSE EVKKQTFDES NTEETVTCVL PDREECNRDD FPVEYKDAKF FIIKSYSEDD VHKSIKYNVW ASTPNGNKKL DAAYQEAQQK
401: SSGCPVFLFF SVNASGQFIG LAEMKGPVDF NKNIEYWQQD KWTGSFPLKW HILKDVPNSL LKHITLEYNE NKPVTNSRDT QEVKLEQGLK VVKIFKEHNS
501: KTCILDDFSF YEARQKTILE KKAKQQQSQK QVWEGKTNDE KPGTVDSTM
101: GPFASSVPAS TQSKLSTNKA ANSASAGIPK GMNGSAPVKP LNQSALYGNS ALGGGLAAGY QDPRYSYDGF YTPVSWHDGS NFSDVQRSVS GSGVASSYSK
201: ANNNVPATRN QNSSSNSHYT SMYQPASMTG YAAQGYYDRV SPNKSYGQYG STVRSGMGYG SSGYGSRTNE RGWLNTDNKY RSRGRGNSYF YGNENIDGLN
301: ELNRGPRAKG TKATEEVSSE EVKKQTFDES NTEETVTCVL PDREECNRDD FPVEYKDAKF FIIKSYSEDD VHKSIKYNVW ASTPNGNKKL DAAYQEAQQK
401: SSGCPVFLFF SVNASGQFIG LAEMKGPVDF NKNIEYWQQD KWTGSFPLKW HILKDVPNSL LKHITLEYNE NKPVTNSRDT QEVKLEQGLK VVKIFKEHNS
501: KTCILDDFSF YEARQKTILE KKAKQQQSQK QVWEGKTNDE KPGTVDSTM
Arabidopsis Description
ECT4evolutionarily conserved C-terminal region 4 [Source:TAIR;Acc:AT1G55500]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.