CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031981_P002	Maize	cytosol	91.08	89.4
Os08t0556000-01	Rice	nucleus	78.87	80.77
TraesCS1A01G044500.1	Wheat	nucleus	76.37	76.01
HORVU1Hr1G008330.2	Barley	nucleus	76.21	75.86
TraesCS1D01G045100.1	Wheat	nucleus	76.06	75.7
TraesCS1B01G057800.3	Wheat	nucleus	75.74	75.39
TraesCS7A01G276800.3	Wheat	nucleus	69.95	71.52
TraesCS7D01G276800.4	Wheat	nucleus	69.64	71.2
TraesCS7B01G174500.1	Wheat	nucleus	66.51	70.95
CDY51902	Canola	cytosol	14.55	60.0
GSMUA_Achr4P12480_001	Banana	cytosol	47.57	52.32
HORVU7Hr1G058250.46	Barley	cytosol, plastid	38.18	51.48
Bra034710.1-P	Field mustard	nucleus	46.48	50.0
VIT_09s0054g01600.t01	Wine grape	nucleus	51.17	49.1
CDY23562	Canola	nucleus	47.42	48.87
GSMUA_Achr4P11560_001	Banana	nucleus	49.61	48.84
Bra039366.1-P	Field mustard	nucleus	45.7	48.59
AT3G13060.2	Thale cress	nucleus	48.2	48.58
CDY44025	Canola	nucleus	47.26	48.55
CDY24224	Canola	nucleus	46.01	47.88
CDY43378	Canola	nucleus	45.85	47.72
EES14722	Sorghum	nucleus	43.51	46.8
KRH46969	Soybean	endoplasmic reticulum, extracellular	47.1	46.52
KRH44697	Soybean	mitochondrion	47.42	46.05
VIT_01s0010g03690.t01	Wine grape	cytosol	40.06	44.76
GSMUA_Achr4P04600_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	50.7	42.02
KXG27074	Sorghum	cytosol	33.8	39.13
Bra006780.1-P	Field mustard	cytosol	30.67	38.51
AT5G58190.2	Thale cress	nucleus	31.61	38.26
CDX88661	Canola	nucleus	30.52	38.24
CDY58572	Canola	nucleus	30.2	38.07
Solyc05g032850.2.1	Tomato	nucleus	35.52	37.58
CDY02802	Canola	nucleus	30.52	36.52
CDY32718	Canola	nucleus	29.89	36.11
Bra020382.1-P	Field mustard	nucleus	30.2	34.9
CDX90116	Canola	nucleus	28.01	34.36
CDY67303	Canola	nucleus	28.01	34.36
Bra010911.1-P	Field mustard	nucleus	27.86	34.17
VIT_11s0065g00160.t01	Wine grape	nucleus	38.65	33.61
EER93313	Sorghum	cytosol	29.58	33.04
CDY11758	Canola	nucleus, plastid	28.64	33.03
AT1G27960.1	Thale cress	cytosol	27.07	32.1
EER93461	Sorghum	nucleus	32.71	31.71
KXG34475	Sorghum	cytosol	30.36	30.03
KXG40139	Sorghum	plastid	32.86	29.54
OQU87332	Sorghum	mitochondrion, nucleus	28.48	27.12
KXG21015	Sorghum	nucleus	25.2	24.66
KXG24185	Sorghum	nucleus	23.63	20.6
OQU77486	Sorghum	cytosol	21.75	19.63

Protein Annotations

EnsemblPlants:KXG25412	EnsemblPlantsGene:SORBI_3007G172700	EntrezGene:8058007	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	ncoils:Coil	PANTHER:PTHR12357
PANTHER:PTHR12357:SF57	PFAM:PF04146	PFscan:PS50882	ProteinID:KXG25412	ProteinID:KXG25412.1	SEG:seg
unigene:Sbi.18779	UniParc:UPI00081AD685	UniProt:A0A1B6PIB1	MapMan:16.5.2.1	:	:

Description

hypothetical protein

Coordinates

chr7:+:60761969..60767071

Molecular Weight (calculated)

70101.6 Da

IEP (calculated)

5.503

GRAVY (calculated)

-0.616

Length

639 amino acids

Sequence
(BLAST)

001: MVHAAVSRSQ EGLAESPELQ LNALRVLFGS MDKQEPVANV EQKIGLSEKP KEQPVASKDE KAAVPPISVD SNAIDLPSEG QTQAGTSNMD GGHNGAHNFY
101: ASQAQPFYYQ GSGYENTPQE WDTYPPYMSV EGLEVGPPVV YNEDPSLMFH GGYGYDPYAH YSPIATPVPT AVSGDGQLYS PQQFSFSAPY YQQSVPPGMP
201: YLSSPTPISQ GDTNTMMPID PTQGAFIADT LSPNSFLFGP RPEWFRSSEG TGSFPSPAAS PQPSSGVPGT YGQSNFPMAS GMASPHQKPF YGLGSTADSY
301: GRGFSHGGMF PQASNYGGSF TSFGFNGRSS ISIEKGRRRG RGNALICSCN GPLDFLNEQS RGPRATKPKK QPEVDSKDEK PTTGVGRESY NKPDFVTEYM
401: NARFFIIKSY SEDNVHKSVK YGVWASTTNG NKKLDLAYRE AKEKEEHCPI FLLFSVNASA QFCGVAEMIG PVDFEKSVDY WQQDKWTGQF PVKWHIVKDV
501: PNNLFRHIIL ENNDNKPVTN SRDTQEVKLE QGLEMLKIFK NHDDDASILD DFDFYEEREK ALQENKARLH QQHLPSSIVV EPKKPLTVPT DLVSHITKSF
601: AQAVRLGEAK TVSPLAEKVS GGDSSIPVKP VEVKQSGLS

Best Arabidopsis Sequence Match ( AT3G13060.4 )
(BLAST)

001: MNTEEQPASL DIMKEQTVPA NNETSASFKS SQEAPVVVHP AKVAPLTGPY GLAGDFAGHL PSSILSPQAQ GFYYRGYENP TGEWDEYSSY VNVEGLDITS
101: PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR QSYHPHPIGP
201: FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG SNYGSRLISN
301: VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL FIIKSYSEDN
401: VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ FRHIILENND
501: NKPVTNSRDT QEVKLEQGIE MLKIFKNYDA DTSILDDFGF YEEREKIIQD RKARRQPSLP SAGVVAGENE HKPASAALPT DFMKNMSKSF AQVVRLDEGS
601: KEAVKASSSP DAITTAAVSS GQSN

Arabidopsis Description

ECT5Evolutionarily conserved C-terminal region 5 [Source:UniProtKB/TrEMBL;Acc:Q0WR25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.