Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002372_P002 | Maize | nucleus | 84.24 | 84.24 |
| Os04t0608800-01 | Rice | nucleus | 51.45 | 50.0 |
| CDY51902 | Canola | cytosol | 13.95 | 49.68 |
| EES14722 | Sorghum | nucleus | 48.73 | 45.29 |
| GSMUA_Achr1P10560_001 | Banana | nucleus | 28.99 | 35.96 |
| VIT_09s0054g01600.t01 | Wine grape | nucleus | 41.3 | 34.23 |
| Bra039366.1-P | Field mustard | nucleus | 37.14 | 34.11 |
| KXG25412 | Sorghum | cytosol | 39.13 | 33.8 |
| VIT_01s0010g03690.t01 | Wine grape | cytosol | 34.78 | 33.57 |
| CDY43378 | Canola | nucleus | 37.32 | 33.55 |
| CDY24224 | Canola | nucleus | 37.32 | 33.55 |
| Bra034710.1-P | Field mustard | nucleus | 36.05 | 33.5 |
| KRH46969 | Soybean | endoplasmic reticulum, extracellular | 38.77 | 33.08 |
| CDY23562 | Canola | nucleus | 36.96 | 32.9 |
| KRH44697 | Soybean | mitochondrion | 38.95 | 32.67 |
| CDY44025 | Canola | nucleus | 36.59 | 32.48 |
| AT3G13060.2 | Thale cress | nucleus | 36.96 | 32.18 |
| Solyc05g032850.2.1 | Tomato | nucleus | 34.06 | 31.13 |
| CDY58572 | Canola | nucleus | 27.72 | 30.18 |
| EER93313 | Sorghum | cytosol | 30.98 | 29.9 |
| Bra006780.1-P | Field mustard | cytosol | 27.36 | 29.67 |
| CDX88661 | Canola | nucleus | 27.36 | 29.61 |
| CDY02802 | Canola | nucleus | 28.62 | 29.59 |
| AT5G58190.2 | Thale cress | nucleus | 28.08 | 29.36 |
| CDY32718 | Canola | nucleus | 28.08 | 29.3 |
| EER93461 | Sorghum | nucleus | 34.6 | 28.98 |
| Bra020382.1-P | Field mustard | nucleus | 28.08 | 28.03 |
| CDX90116 | Canola | nucleus | 26.45 | 28.02 |
| CDY67303 | Canola | nucleus | 26.45 | 28.02 |
| Bra010911.1-P | Field mustard | nucleus | 26.27 | 27.83 |
| AT1G27960.1 | Thale cress | cytosol | 26.27 | 26.9 |
| CDY11758 | Canola | nucleus, plastid | 26.81 | 26.71 |
| KXG34475 | Sorghum | cytosol | 31.16 | 26.63 |
| KXG40139 | Sorghum | plastid | 34.24 | 26.58 |
| VIT_11s0065g00160.t01 | Wine grape | nucleus | 34.78 | 26.12 |
| OQU87332 | Sorghum | mitochondrion, nucleus | 30.25 | 24.89 |
| KXG21015 | Sorghum | nucleus | 28.26 | 23.89 |
| KXG24185 | Sorghum | nucleus | 24.82 | 18.69 |
| OQU77486 | Sorghum | cytosol | 21.56 | 16.81 |
Protein Annotations
| EnsemblPlants:KXG27074 | EnsemblPlantsGene:SORBI_3006G208800 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF61 | PFAM:PF04146 |
| PFscan:PS50882 | ProteinID:KXG27074 | ProteinID:KXG27074.1 | SEG:seg | UniParc:UPI00081AB468 | UniProt:A0A1B6PN10 |
| MapMan:16.5.2.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:55865933..55869663
Molecular Weight (calculated)
61415.3 Da
IEP (calculated)
5.277
GRAVY (calculated)
-0.696
Length
552 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPLETQIVV EKNPSTSADA KELVLTKDQN TSTTVVQGTS SLTSPKGVQE QASFMGKGGE QQFGYQPNVY APQPHTPFSG GYLNQLGQWE GYPYADGLDA
101: TYPVTYGAYS PLSAIGDSQT YFSLLYPMSS PCYQPPASPS TGYSSPGTGI SQFDPMHQYY FPDEVHYSSA PGFYQPFGSF NEIPMQSSGV PGFFEQGNIP
201: LASRMHQESM SNSGSYKAFQ QGGKFGGSTQ SWSTASCRFD TFNKGFKNEK GSLDFLNEQC HGPRATKTQK EVGISSAEDK NKKTLPIADS EKYNHPGFVT
301: EYKDARFFVI KSYTEDHIHK SIKYNVWAST PRGNRKLNAC YREAKEKEDR CPIFLFFSVN SSGQFCGVAE MTGPVDFDKS VDYWQNDRWN GQFPVKWHIV
401: KDVPNSIVRH ITLENNENKR VTNSRDTQEV KLEQGLKMLA IFKNHEAETS ILEDFDFYEQ REKAMLDDRQ QQKQQCSKTG KQVQQASAPV NIVTGISDAF
501: AEAVQLEETN DKEDKPRIED AAAADNVPAA PVKIEEAMLK TAEVGGLLKE SG
101: TYPVTYGAYS PLSAIGDSQT YFSLLYPMSS PCYQPPASPS TGYSSPGTGI SQFDPMHQYY FPDEVHYSSA PGFYQPFGSF NEIPMQSSGV PGFFEQGNIP
201: LASRMHQESM SNSGSYKAFQ QGGKFGGSTQ SWSTASCRFD TFNKGFKNEK GSLDFLNEQC HGPRATKTQK EVGISSAEDK NKKTLPIADS EKYNHPGFVT
301: EYKDARFFVI KSYTEDHIHK SIKYNVWAST PRGNRKLNAC YREAKEKEDR CPIFLFFSVN SSGQFCGVAE MTGPVDFDKS VDYWQNDRWN GQFPVKWHIV
401: KDVPNSIVRH ITLENNENKR VTNSRDTQEV KLEQGLKMLA IFKNHEAETS ILEDFDFYEQ REKAMLDDRQ QQKQQCSKTG KQVQQASAPV NIVTGISDAF
501: AEAVQLEETN DKEDKPRIED AAAADNVPAA PVKIEEAMLK TAEVGGLLKE SG
001: MATTQSHTSD LTSEEQPASL DIMKEQTVPA NNETSASFKS SQEAPVVVHP AKVAPLTGPY GLAGDFAGHL PSSILSPQAQ GFYYRGYENP TGEWDEYSSY
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVKLEQGIE MLKIFKNYDA DTSILDDFGF YEEREKIIQD RKARRQPSLP SAGVVAGENE HKPASAALPT DFMKNMSKSF
601: AQVVRLDEGS KEAVKASSSP DAITTAAVSS GQSN
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVKLEQGIE MLKIFKNYDA DTSILDDFGF YEEREKIIQD RKARRQPSLP SAGVVAGENE HKPASAALPT DFMKNMSKSF
601: AQVVRLDEGS KEAVKASSSP DAITTAAVSS GQSN
Arabidopsis Description
ECT5Evolutionarily conserved C-terminal region 5 [Source:UniProtKB/TrEMBL;Acc:Q0WR25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.