Factsheet for Bra010911.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plasma membrane 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67303	Canola	nucleus	99.62	99.62
CDX90116	Canola	nucleus	99.62	99.62
Zm00001d002008_P001	Maize	cytosol	9.79	69.86
AT1G27960.1	Thale cress	cytosol	68.14	65.86
Bra031960.1-P	Field mustard	nucleus	25.72	33.84
Bra004105.1-P	Field mustard	nucleus	25.53	33.59
Bra036423.1-P	Field mustard	nucleus	25.53	32.76
Bra034710.1-P	Field mustard	nucleus	36.47	31.99
Bra008509.1-P	Field mustard	cytosol	25.72	31.68
GSMUA_Achr1P10560_001	Banana	nucleus	26.49	31.01
VIT_01s0010g03690.t01	Wine grape	cytosol	33.59	30.59
GSMUA_Achr4P12480_001	Banana	cytosol	33.97	30.46
Bra039366.1-P	Field mustard	nucleus	35.12	30.45
Bra035104.1-P	Field mustard	cytosol	25.34	29.8
Bra018951.1-P	Field mustard	cytosol	14.59	29.34
Os08t0556000-01	Rice	nucleus	34.93	29.17
Zm00001d008913_P001	Maize	cytosol, nucleus, peroxisome	22.26	29.07
Bra038524.1-P	Field mustard	cytosol	12.48	28.89
Bra014253.1-P	Field mustard	cytosol	16.51	28.86
Bra008406.1-P	Field mustard	cytosol	24.76	28.79
GSMUA_Achr4P11560_001	Banana	nucleus	35.32	28.35
KXG25412	Sorghum	cytosol	34.17	27.86
TraesCS7B01G174500.1	Wheat	nucleus	31.67	27.55
TraesCS7A01G276800.3	Wheat	nucleus	32.82	27.36
TraesCS7D01G276800.4	Wheat	nucleus	32.82	27.36
TraesCS1A01G044500.1	Wheat	nucleus	33.4	27.1
TraesCS1B01G057800.3	Wheat	nucleus	33.4	27.1
TraesCS1D01G045100.1	Wheat	nucleus	33.4	27.1
HORVU1Hr1G008330.2	Barley	nucleus	33.21	26.95
Zm00001d031981_P002	Maize	cytosol	33.01	26.42
Bra003615.1-P	Field mustard	nucleus	25.72	26.33
KXG27074	Sorghum	cytosol	27.83	26.27
Os04t0608800-01	Rice	nucleus	28.6	26.23
EES14722	Sorghum	nucleus	29.56	25.93
Bra006780.1-P	Field mustard	cytosol	25.14	25.74
Zm00001d002372_P002	Maize	nucleus	27.26	25.72
Bra027432.1-P	Field mustard	nucleus	30.9	25.39
Zm00001d049360_P004	Maize	extracellular	28.98	25.34
Bra001506.1-P	Field mustard	nucleus	30.9	25.2
Bra020382.1-P	Field mustard	nucleus	26.68	25.14
Zm00001d024339_P001	Maize	extracellular	28.41	25.0
TraesCS7B01G182100.2	Wheat	cytosol	28.02	24.66
Bra019988.1-P	Field mustard	nucleus	23.61	24.55
TraesCS7A01G291700.1	Wheat	cytosol	27.64	24.41
Os08t0224200-01	Rice	mitochondrion	28.98	24.39
Bra039400.1-P	Field mustard	nucleus	29.56	24.21
HORVU7Hr1G069070.2	Barley	cytosol	27.06	23.9
TraesCS7D01G285000.1	Wheat	endoplasmic reticulum	28.02	23.86
HORVU7Hr1G058250.46	Barley	cytosol, plastid	21.69	23.84
GSMUA_Achr4P04600_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	35.12	23.74
Zm00001d047072_P001	Maize	mitochondrion	22.07	23.52
Bra018708.1-P	Field mustard	nucleus	27.06	23.19

Protein Annotations

EnsemblPlants:Bra010911.1	EnsemblPlants:Bra010911.1-P	EnsemblPlantsGene:Bra010911	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357	PANTHER:PTHR12357:SF56
PFAM:PF04146	PFscan:PS50882	SEG:seg	UniParc:UPI0002545882	UniProt:M4D358	MapMan:16.5.2.1

Description

AT1G27960 (E=8e-187) ECT9 | ECT9 (evolutionarily conserved C-terminal region 9)

Coordinates

chrA08:+:17068926..17071585

Molecular Weight (calculated)

59388.0 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.655

Length

521 amino acids

Sequence
(BLAST)

001: MVERLSTDKS VLQHQDTNSF RPFCASGYPF SPSSCGINTD SFHVGGYEHA VDTPSSYRSS TDTLSFEEVY HGMRYDDMFY HGNGVPSLPQ HYGDLHADDV
101: NYFAPFRSSN QQYPLPEPLH ASPEFHMSQT NSTHPYRHGN EINSFETDYM MRSTRNFGLR NNIFGKPKLN PFTGRRTFLP MASTTRSMKH SISADLSAND
201: FDMGSPSRFL QDDFGSSASL TYREQAYNQC KRGSFSASSS SPSSPWELDY IFPPLDESTS GSCSDFYHRP AMSDLLTERN RGPRASRPNA KSKMITYDQQ
301: DLLSQFRDAK FFVIKSYSED NVYKSMKYCV WASTKNGNKK LDAAYREAKT KEVACPVFLL FSVNASAQFC GVAEMVGPVD FETSVEYWQQ DRWSGHFPVK
401: WVIVKDVPNS LFRHIIIEDN DNKPVTNSRD TQEVGVEQGI EMINIFNSCE MKSSILDDFS FYEERQRIQD RKARQRALLE PLRASSLTSV PTHLASSLHE
501: DYVREMSKSF ADALVLQHKL N

Best Arabidopsis Sequence Match ( AT1G27960.1 )
(BLAST)

001: MAASYRSTDW FPPTTTTGSF TGLNTDQSVL QDQDIVSSRP FCGQGTESFH IGADTPRSNH SHSDVPSFDK VSPGMINEMF YHSNGVPSDF QRSSLSTRNQ
101: SSLQHYGDLY ADDSRYFVPF HLSNQQYPTP EDIHLSPEFH MFQANSRHFD RHVNERNSSE IDNMMRARGN SVLRDNIYGE PRGMNLNPFS GENMFPPLAS
201: TRPCMRHLGS AELLANDFNM GPAHGGLHDA FESAANLSYR EQAYAQCKRS PFSASSSSPT WENDYNLPPL DEARSESYND FSHCPAMLDM LTESNRGPRA
301: SRLNSKSKMI SYDRVDRFCQ QELLSQFRDA KFFVIKSYSE DNVHKSIKHC VWASTKNGNK KLDAAYREAK KKDVACPVFL LFSVNASSQF CGVAEMVGPV
401: DFNTSVEYWQ QDRWSGHFPV QWLIVKDVPN SLFRHIIIES NDNKPVTNSR DTQEVGLEKG IEMLDIFISC EMRSSILDDF NFYEERQIAI QDRKARQRAV
501: LESLALSATS APTYSLHDDF VREMSKHFAE ALALQHRPK

Arabidopsis Description

ECT9At1g27960 [Source:UniProtKB/TrEMBL;Acc:Q500V8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.