Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G276800.4 | Wheat | nucleus | 98.24 | 98.24 |
| TraesCS7B01G174500.1 | Wheat | nucleus | 92.96 | 97.0 |
| TraesCS1A01G044500.1 | Wheat | nucleus | 85.76 | 83.49 |
| Os08t0556000-01 | Rice | nucleus | 77.92 | 78.04 |
| KXG25412 | Sorghum | cytosol | 71.52 | 69.95 |
| Zm00001d031981_P002 | Maize | cytosol | 68.32 | 65.59 |
| HORVU7Hr1G058250.46 | Barley | cytosol, plastid | 45.92 | 60.55 |
| CDY51902 | Canola | cytosol | 13.12 | 52.9 |
| GSMUA_Achr4P12480_001 | Banana | cytosol | 46.72 | 50.26 |
| Bra034710.1-P | Field mustard | nucleus | 44.64 | 46.97 |
| GSMUA_Achr4P11560_001 | Banana | nucleus | 48.48 | 46.69 |
| VIT_09s0054g01600.t01 | Wine grape | nucleus | 49.28 | 46.25 |
| CDY23562 | Canola | nucleus | 44.96 | 45.32 |
| AT3G13060.2 | Thale cress | nucleus | 45.92 | 45.27 |
| CDY44025 | Canola | nucleus | 44.96 | 45.18 |
| Bra039366.1-P | Field mustard | nucleus | 42.72 | 44.43 |
| CDY43378 | Canola | nucleus | 43.2 | 43.97 |
| CDY24224 | Canola | nucleus | 43.2 | 43.97 |
| VIT_01s0010g03690.t01 | Wine grape | cytosol | 40.16 | 43.88 |
| KRH46969 | Soybean | endoplasmic reticulum, extracellular | 44.48 | 42.97 |
| TraesCS7A01G291700.1 | Wheat | cytosol | 40.48 | 42.88 |
| KRH44697 | Soybean | mitochondrion | 44.64 | 42.4 |
| GSMUA_Achr4P04600_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 49.12 | 39.82 |
| Bra006780.1-P | Field mustard | cytosol | 30.4 | 37.33 |
| CDY58572 | Canola | nucleus | 29.76 | 36.69 |
| CDX88661 | Canola | nucleus | 29.76 | 36.47 |
| CDY02802 | Canola | nucleus | 30.56 | 35.77 |
| Solyc05g032850.2.1 | Tomato | nucleus | 34.4 | 35.6 |
| AT5G58190.2 | Thale cress | nucleus | 29.92 | 35.42 |
| CDY32718 | Canola | nucleus | 29.92 | 35.35 |
| Bra020382.1-P | Field mustard | nucleus | 29.92 | 33.82 |
| Bra010911.1-P | Field mustard | nucleus | 27.36 | 32.82 |
| CDX90116 | Canola | nucleus | 27.36 | 32.82 |
| CDY67303 | Canola | nucleus | 27.36 | 32.82 |
| VIT_11s0065g00160.t01 | Wine grape | nucleus | 37.76 | 32.11 |
| TraesCS5A01G431200.1 | Wheat | nucleus | 30.08 | 31.92 |
| AT1G27960.1 | Thale cress | cytosol | 27.2 | 31.54 |
| CDY11758 | Canola | nucleus, plastid | 27.84 | 31.41 |
| TraesCS5A01G386600.2 | Wheat | nucleus | 32.48 | 30.62 |
| TraesCS4A01G031600.2 | Wheat | cytosol | 34.08 | 29.22 |
| TraesCS5A01G431100.1 | Wheat | cytosol | 29.12 | 28.35 |
| TraesCS3A01G267700.1 | Wheat | nucleus | 29.44 | 26.63 |
| TraesCS4A01G125600.3 | Wheat | cytosol, nucleus, plastid | 28.32 | 24.62 |
| TraesCS2A01G011400.1 | Wheat | nucleus | 25.28 | 22.22 |
| TraesCS3A01G199100.2 | Wheat | cytosol | 23.04 | 20.9 |
| TraesCS1A01G105700.1 | Wheat | cytosol | 22.72 | 20.23 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G276800.3 | EnsemblPlantsGene:TraesCS7A01G276800 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF57 | PFAM:PF04146 |
| PFscan:PS50882 | MapMan:16.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:289607202..289614769
Molecular Weight (calculated)
69275.7 Da
IEP (calculated)
6.017
GRAVY (calculated)
-0.684
Length
625 amino acids
Sequence
(BLAST)
(BLAST)
001: MESASERTGA MDSPEPRIET IPMKDEKTVK PTISLDSSVI NLPSEGQVQA VTSNIGGEHS AAYPQHIYSS QAEPFYYQGT GYENLPNECD VYPPYTSVDG
101: LEVGPAVMYN EEPSMMYHGG YGYDPYAHYS PISTPVPAGV SGDGQLYSPQ QFSSAPYYQQ PLQPDMPYLG SPTPVSQGET MMPIDPTQSA FIADTLSPNS
201: FLFGPRPEWF RSSQGTGSFL SPATSPQPFG DVSGAFGQSN FPMASGMMPP QQKSFYGFGT PSDSYGRRFS HRGSFPHATN YGSPFPGYGL NGRSLNPVDK
301: ERRRGRGNAL LCSFVGSLDF LNEQSRGPRS TRPKKQREDN SKDEKSSAGL DQGSYNRTDF VTEYKNARFF IIKSYSEDNV HKSIKYGVWA STTNGNKKLD
401: GAYHEVKKEE HCPIFLLFSV NASAQFCGVA EMTGPVNFEK SVDYWQQDKW TGQFPVNWHI LKDVPNNLFR HIILENNEHK PVTNSRDTQE VKLEQGQEML
501: KIFKDHEEDA SILDDFNFYE EREKALLENK ARLYQQQQIS SSTVAEPKKP STVPTDLVGH IAKNCSFIEP KKPLTVPTDM VGHITKTFAQ AVRLGKAKSV
601: SPLGKKGPAG DLSVAAKPVE VRESD
101: LEVGPAVMYN EEPSMMYHGG YGYDPYAHYS PISTPVPAGV SGDGQLYSPQ QFSSAPYYQQ PLQPDMPYLG SPTPVSQGET MMPIDPTQSA FIADTLSPNS
201: FLFGPRPEWF RSSQGTGSFL SPATSPQPFG DVSGAFGQSN FPMASGMMPP QQKSFYGFGT PSDSYGRRFS HRGSFPHATN YGSPFPGYGL NGRSLNPVDK
301: ERRRGRGNAL LCSFVGSLDF LNEQSRGPRS TRPKKQREDN SKDEKSSAGL DQGSYNRTDF VTEYKNARFF IIKSYSEDNV HKSIKYGVWA STTNGNKKLD
401: GAYHEVKKEE HCPIFLLFSV NASAQFCGVA EMTGPVNFEK SVDYWQQDKW TGQFPVNWHI LKDVPNNLFR HIILENNEHK PVTNSRDTQE VKLEQGQEML
501: KIFKDHEEDA SILDDFNFYE EREKALLENK ARLYQQQQIS SSTVAEPKKP STVPTDLVGH IAKNCSFIEP KKPLTVPTDM VGHITKTFAQ AVRLGKAKSV
601: SPLGKKGPAG DLSVAAKPVE VRESD
001: MATTQSHTSD LTSEEQPASL DIMKEQTVPA NNETSASFKS SQEAPVVVHP AKVAPLTGPY GLAGDFAGHL PSSILSPQAQ GFYYRGYENP TGEWDEYSSY
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVSSNLCLS SFLVHKIPLL SHTITTTKNY R
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVSSNLCLS SFLVHKIPLL SHTITTTKNY R
Arabidopsis Description
ECT5Evolutionarily conserved C-terminal region 5 [Source:UniProtKB/TrEMBL;Acc:Q0WR25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.