Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034710.1-P | Field mustard | nucleus | 84.23 | 89.9 |
| CDY23562 | Canola | nucleus | 87.7 | 89.68 |
| CDY44025 | Canola | nucleus | 87.85 | 89.55 |
| Bra039366.1-P | Field mustard | nucleus | 83.91 | 88.52 |
| CDY43378 | Canola | nucleus | 85.33 | 88.11 |
| CDY24224 | Canola | nucleus | 84.86 | 87.62 |
| CDY51902 | Canola | cytosol | 20.98 | 85.81 |
| Zm00001d002008_P001 | Maize | cytosol | 9.31 | 80.82 |
| Os08t0556000-01 | Rice | nucleus | 48.74 | 49.52 |
| KXG25412 | Sorghum | cytosol | 48.58 | 48.2 |
| GSMUA_Achr4P12480_001 | Banana | cytosol | 44.01 | 48.02 |
| TraesCS1A01G044500.1 | Wheat | nucleus | 48.42 | 47.82 |
| HORVU1Hr1G008330.2 | Barley | nucleus | 48.27 | 47.66 |
| TraesCS1D01G045100.1 | Wheat | nucleus | 48.27 | 47.66 |
| TraesCS1B01G057800.3 | Wheat | nucleus | 48.11 | 47.51 |
| Zm00001d031981_P002 | Maize | cytosol | 47.63 | 46.39 |
| GSMUA_Achr4P11560_001 | Banana | nucleus | 47.16 | 46.07 |
| TraesCS7A01G276800.3 | Wheat | nucleus | 45.27 | 45.92 |
| TraesCS7D01G276800.4 | Wheat | nucleus | 45.11 | 45.76 |
| TraesCS7B01G174500.1 | Wheat | nucleus | 42.59 | 45.08 |
| EES14722 | Sorghum | nucleus | 41.64 | 44.44 |
| Os08t0224200-01 | Rice | mitochondrion | 42.11 | 43.13 |
| TraesCS7B01G182100.2 | Wheat | cytosol | 40.22 | 43.07 |
| TraesCS7A01G291700.1 | Wheat | cytosol | 39.91 | 42.88 |
| Zm00001d049360_P004 | Maize | extracellular | 40.22 | 42.79 |
| Zm00001d024339_P001 | Maize | extracellular | 39.91 | 42.74 |
| HORVU7Hr1G069070.2 | Barley | cytosol | 39.43 | 42.37 |
| GSMUA_Achr1P10560_001 | Banana | nucleus | 28.86 | 41.12 |
| Os04t0608800-01 | Rice | nucleus | 36.59 | 40.85 |
| TraesCS7D01G285000.1 | Wheat | endoplasmic reticulum | 39.12 | 40.52 |
| GSMUA_Achr4P04600_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 48.27 | 39.69 |
| AT3G03950.3 | Thale cress | cytosol | 26.66 | 39.49 |
| AT5G58190.2 | Thale cress | nucleus | 32.65 | 39.2 |
| Zm00001d008913_P001 | Maize | cytosol, nucleus, peroxisome | 24.45 | 38.85 |
| HORVU7Hr1G058250.46 | Barley | cytosol, plastid | 28.39 | 37.97 |
| KXG27074 | Sorghum | cytosol | 32.18 | 36.96 |
| AT1G55500.5 | Thale cress | cytosol | 34.86 | 36.53 |
| Zm00001d002372_P002 | Maize | nucleus | 30.76 | 35.33 |
| AT3G13460.1 | Thale cress | cytosol | 36.59 | 34.78 |
| AT1G27960.1 | Thale cress | cytosol | 29.5 | 34.69 |
| AT1G09810.1 | Thale cress | nucleus | 24.76 | 33.4 |
| Zm00001d047072_P001 | Maize | mitochondrion | 24.76 | 32.11 |
| AT5G61020.1 | Thale cress | cytosol | 24.76 | 31.72 |
| AT1G79270.1 | Thale cress | nucleus | 25.87 | 31.06 |
| AT3G17330.1 | Thale cress | nucleus | 27.6 | 29.41 |
| AT1G48110.2 | Thale cress | nucleus | 29.18 | 28.95 |
Protein Annotations
| MapMan:16.5.2.1 | Gene3D:3.10.590.10 | EntrezGene:820492 | UniProt:A0A178VCB0 | ProteinID:AEE75284.1 | EMBL:AK228498 |
| ProteinID:ANM65924.1 | ProteinID:ANM65926.1 | ProteinID:ANM65927.1 | ArrayExpress:AT3G13060 | EnsemblPlantsGene:AT3G13060 | RefSeq:AT3G13060 |
| TAIR:AT3G13060 | RefSeq:AT3G13060-TAIR-G | EnsemblPlants:AT3G13060.2 | TAIR:AT3G13060.2 | Unigene:At.39501 | Symbol:ECT5 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | InterPro:IPR007275 | RefSeq:NP_001327857.1 |
| RefSeq:NP_001327859.1 | RefSeq:NP_001327860.1 | RefSeq:NP_187912.2 | ProteinID:OAP03444.1 | PFAM:PF04146 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50882 | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF24 |
| UniProt:Q0WR25 | UniParc:UPI0000196C4F | InterPro:YTH_domain | SEG:seg | : | : |
Description
ECT5Evolutionarily conserved C-terminal region 5 [Source:UniProtKB/TrEMBL;Acc:Q0WR25]
Coordinates
chr3:+:4180355..4183975
Molecular Weight (calculated)
69485.0 Da
IEP (calculated)
5.267
GRAVY (calculated)
-0.730
Length
634 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTQSHTSD LTSEEQPASL DIMKEQTVPA NNETSASFKS SQEAPVVVHP AKVAPLTGPY GLAGDFAGHL PSSILSPQAQ GFYYRGYENP TGEWDEYSSY
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVKLEQGIE MLKIFKNYDA DTSILDDFGF YEEREKIIQD RKARRQPSLP SAGVVAGENE HKPASAALPT DFMKNMSKSF
601: AQVVRLDEGS KEAVKASSSP DAITTAAVSS GQSN
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVKLEQGIE MLKIFKNYDA DTSILDDFGF YEEREKIIQD RKARRQPSLP SAGVVAGENE HKPASAALPT DFMKNMSKSF
601: AQVVRLDEGS KEAVKASSSP DAITTAAVSS GQSN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.