Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plasma membrane 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G13460.1 | Thale cress | cytosol | 75.87 | 68.82 |
| VIT_06s0004g00200.t01 | Wine grape | nucleus | 62.98 | 54.04 |
| KRH43005 | Soybean | nucleus | 61.16 | 52.33 |
| KRH59123 | Soybean | nucleus | 60.17 | 51.41 |
| Solyc01g028860.2.1 | Tomato | nucleus | 58.35 | 50.0 |
| PGSC0003DMT400061684 | Potato | endoplasmic reticulum, plasma membrane | 58.35 | 47.96 |
| GSMUA_Achr7P01490_001 | Banana | nucleus | 44.13 | 47.68 |
| GSMUA_Achr4P22630_001 | Banana | nucleus | 48.93 | 47.67 |
| GSMUA_Achr4P21380_001 | Banana | nucleus | 50.25 | 46.2 |
| GSMUA_Achr4P28430_001 | Banana | nucleus, plastid | 46.78 | 46.02 |
| AT3G03950.3 | Thale cress | cytosol | 32.07 | 45.33 |
| GSMUA_Achr5P02830_001 | Banana | cytosol | 45.79 | 44.97 |
| AT5G61020.1 | Thale cress | cytosol | 36.69 | 44.85 |
| GSMUA_Achr7P27220_001 | Banana | cytosol | 48.59 | 44.48 |
| EER93461 | Sorghum | nucleus | 47.77 | 43.85 |
| GSMUA_Achr4P14820_001 | Banana | cytosol | 23.8 | 43.5 |
| Zm00001d034005_P003 | Maize | plasma membrane | 47.27 | 43.33 |
| Os03t0748000-01 | Rice | plasma membrane | 46.94 | 42.97 |
| KXG40139 | Sorghum | plastid | 49.59 | 42.19 |
| TraesCS5D01G396400.3 | Wheat | nucleus | 45.95 | 41.99 |
| TraesCS5B01G391500.1 | Wheat | nucleus | 45.95 | 41.99 |
| TraesCS5A01G386600.2 | Wheat | nucleus | 45.62 | 41.63 |
| Os03t0158500-01 | Rice | nucleus | 48.59 | 41.58 |
| HORVU5Hr1G094950.6 | Barley | cytosol, nucleus | 45.62 | 41.5 |
| EER93313 | Sorghum | cytosol | 38.84 | 41.08 |
| TraesCS5A01G431200.1 | Wheat | nucleus | 38.18 | 39.22 |
| TraesCS5D01G439100.1 | Wheat | nucleus | 38.02 | 39.12 |
| TraesCS5B01G433000.1 | Wheat | cytosol | 38.51 | 39.09 |
| Zm00001d048424_P003 | Maize | plastid | 47.44 | 38.78 |
| TraesCS4D01G273200.4 | Wheat | cytosol | 46.28 | 38.73 |
| HORVU4Hr1G072940.4 | Barley | cytosol | 47.27 | 38.54 |
| TraesCS4A01G031600.2 | Wheat | cytosol | 46.28 | 38.41 |
| KXG34475 | Sorghum | cytosol | 40.66 | 38.08 |
| Os07t0170300-01 | Rice | plasma membrane | 37.85 | 38.04 |
| TraesCS4B01G274500.2 | Wheat | plastid | 47.93 | 37.81 |
| TraesCS5A01G431100.1 | Wheat | cytosol | 39.17 | 36.92 |
| TraesCS5B01G432900.2 | Wheat | extracellular | 39.5 | 36.88 |
| TraesCS5D01G439200.1 | Wheat | cytosol | 38.35 | 36.14 |
| Zm00001d027731_P012 | Maize | plastid | 47.93 | 36.11 |
| Zm00001d007890_P002 | Maize | mitochondrion | 38.51 | 35.68 |
| HORVU5Hr1G104380.1 | Barley | plastid | 38.51 | 35.25 |
| AT3G13060.2 | Thale cress | nucleus | 36.53 | 34.86 |
| Zm00001d018896_P002 | Maize | mitochondrion | 39.83 | 34.14 |
| AT1G09810.1 | Thale cress | nucleus | 26.12 | 33.62 |
| HORVU5Hr1G104390.3 | Barley | plastid | 37.85 | 33.28 |
| AT1G79270.1 | Thale cress | nucleus | 28.1 | 32.2 |
| AT1G27960.1 | Thale cress | cytosol | 26.78 | 30.06 |
| AT5G58190.2 | Thale cress | nucleus | 26.12 | 29.92 |
| AT3G17330.1 | Thale cress | nucleus | 27.93 | 28.4 |
| AT1G48110.2 | Thale cress | nucleus | 28.93 | 27.39 |
Protein Annotations
| MapMan:16.5.2.1 | Gene3D:3.10.590.10 | EntrezGene:841997 | UniProt:A0A1P8AS03 | ProteinID:ANM59431.1 | ProteinID:ANM59432.1 |
| ArrayExpress:AT1G55500 | EnsemblPlantsGene:AT1G55500 | RefSeq:AT1G55500 | TAIR:AT1G55500 | RefSeq:AT1G55500-TAIR-G | EnsemblPlants:AT1G55500.5 |
| Unigene:At.19235 | Symbol:ECT4 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| InterPro:IPR007275 | RefSeq:NP_001321788.1 | RefSeq:NP_001321789.1 | PFAM:PF04146 | PFscan:PS50882 | PANTHER:PTHR12357 |
| PANTHER:PTHR12357:SF63 | UniParc:UPI0008494D2B | InterPro:YTH_domain | SEG:seg | : | : |
Description
ECT4evolutionarily conserved C-terminal region 4 [Source:TAIR;Acc:AT1G55500]
Coordinates
chr1:+:20719473..20722856
Molecular Weight (calculated)
66594.5 Da
IEP (calculated)
6.796
GRAVY (calculated)
-0.788
Length
605 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTVAPPADQ AADVLKKLSL DSKSRTLEIP EPTKKTGVYQ YGAMDSNGQV PSFDRSLSPM LPSDALDPSV FYVPNVYQQP YYYGYGSDYT GYTNSESVDM
101: TSGAYGENAS LVYPQGYGYA AFPYSPATSP APQLGGDGQL YGAQQYQYPF PLTASSGPFA SSVPASTQSK LSTNKAANSA SAGIPKGMNG SAPVKPLNQS
201: ALYGNSALGG GLAAGYQDPR YSYDGFYTPV SWHDGSNFSD VQRSVSGSGV ASSYSKANNN VPATRNQNSS SNSHYTSMYQ PASMTGYAAQ GYYDRVSPNK
301: SYGQYGSTVR SGMGYGSSGY GSRTNERGWL NTDNKYRSRG RGNSYFYGNE NIDGLNELNR GPRAKGTKAT EEVSSEEVKK QTFDESNTEE TVTCVLPDRE
401: ECNRDDFPVE YKDAKFFIIK SYSEDDVHKS IKYNVWASTP NGNKKLDAAY QEAQQKSSGC PVFLFFSVNA SGQFIGLAEM KGPVDFNKNI EYWQQDKWTG
501: SFPLKWHILK DVPNSLLKHI TLEYNENKPV TNSRDTQEVK LEQGLKVVKI FKEHNSKTCI LDDFSFYEAR QKTILEKKAK QQQSQKQVWE GKTNDEKPGT
601: VDSTM
101: TSGAYGENAS LVYPQGYGYA AFPYSPATSP APQLGGDGQL YGAQQYQYPF PLTASSGPFA SSVPASTQSK LSTNKAANSA SAGIPKGMNG SAPVKPLNQS
201: ALYGNSALGG GLAAGYQDPR YSYDGFYTPV SWHDGSNFSD VQRSVSGSGV ASSYSKANNN VPATRNQNSS SNSHYTSMYQ PASMTGYAAQ GYYDRVSPNK
301: SYGQYGSTVR SGMGYGSSGY GSRTNERGWL NTDNKYRSRG RGNSYFYGNE NIDGLNELNR GPRAKGTKAT EEVSSEEVKK QTFDESNTEE TVTCVLPDRE
401: ECNRDDFPVE YKDAKFFIIK SYSEDDVHKS IKYNVWASTP NGNKKLDAAY QEAQQKSSGC PVFLFFSVNA SGQFIGLAEM KGPVDFNKNI EYWQQDKWTG
501: SFPLKWHILK DVPNSLLKHI TLEYNENKPV TNSRDTQEVK LEQGLKVVKI FKEHNSKTCI LDDFSFYEAR QKTILEKKAK QQQSQKQVWE GKTNDEKPGT
601: VDSTM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.