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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • endoplasmic reticulum 1
  • golgi 1
  • extracellular 1
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, endoplasmic reticulum, extracellular, golgi, nucleus
BaCelLo:endoplasmic reticulum, extracellular, golgi
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY23602 Canola nucleus 78.26 83.65
CDY43989 Canola nucleus 79.46 83.6
Bra027432.1-P Field mustard nucleus 79.16 83.28
Bra001506.1-P Field mustard nucleus 77.66 81.06
CDX75712 Canola nucleus 76.76 80.76
CDY07089 Canola nucleus 76.91 80.66
CDY24182 Canola nucleus 65.37 80.59
CDX82538 Canola nucleus 77.21 80.47
Bra039400.1-P Field mustard nucleus 76.46 80.19
AT1G55500.5 Thale cress cytosol 68.82 75.87
VIT_06s0004g00200.t01 Wine grape nucleus 61.62 58.3
KRH43005 Soybean nucleus 59.67 56.29
KRH59123 Soybean nucleus 58.62 55.23
Solyc01g028860.2.1 Tomato nucleus 57.12 53.97
GSMUA_Achr7P01490_001 Banana nucleus 43.18 51.43
PGSC0003DMT400061684 Potato endoplasmic reticulum, plasma membrane 56.67 51.36
GSMUA_Achr4P22630_001 Banana nucleus 47.38 50.89
GSMUA_Achr4P21380_001 Banana nucleus 49.18 49.85
GSMUA_Achr4P28430_001 Banana nucleus, plastid 45.43 49.27
GSMUA_Achr5P02830_001 Banana cytosol 44.53 48.21
AT3G03950.3 Thale cress cytosol 30.13 46.96
GSMUA_Achr7P27220_001 Banana cytosol 46.48 46.9
EER93461 Sorghum nucleus 46.18 46.74
Zm00001d034005_P003 Maize plasma membrane 45.28 45.76
AT5G61020.1 Thale cress cytosol 33.88 45.66
KXG40139 Sorghum plastid 48.28 45.29
Os03t0158500-01 Rice nucleus 47.83 45.12
Os03t0748000-01 Rice plasma membrane 44.68 45.08
GSMUA_Achr4P14820_001 Banana cytosol 22.34 45.02
TraesCS5B01G391500.1 Wheat nucleus 43.63 43.96
TraesCS5A01G386600.2 Wheat nucleus 43.63 43.89
TraesCS5D01G396400.3 Wheat nucleus 43.48 43.81
HORVU5Hr1G094950.6 Barley cytosol, nucleus 43.63 43.76
EER93313 Sorghum cytosol 36.28 42.31
TraesCS5B01G433000.1 Wheat cytosol 37.78 42.28
TraesCS5A01G431200.1 Wheat nucleus 36.88 41.77
TraesCS5D01G439100.1 Wheat nucleus 36.73 41.67
Zm00001d048424_P003 Maize plastid 46.03 41.49
TraesCS4D01G273200.4 Wheat cytosol 44.83 41.36
HORVU4Hr1G072940.4 Barley cytosol 45.73 41.11
TraesCS4A01G031600.2 Wheat cytosol 44.68 40.88
TraesCS4B01G274500.2 Wheat plastid 46.63 40.55
KXG34475 Sorghum cytosol 38.83 40.09
Os07t0170300-01 Rice plasma membrane 35.23 39.04
Zm00001d027731_P012 Maize plastid 46.78 38.85
TraesCS5A01G431100.1 Wheat cytosol 36.73 38.16
TraesCS5B01G432900.2 Wheat extracellular 36.88 37.96
TraesCS5D01G439200.1 Wheat cytosol 36.43 37.85
Zm00001d007890_P002 Maize mitochondrion 36.73 37.52
HORVU5Hr1G104380.1 Barley plastid 37.03 37.37
AT3G13060.2 Thale cress nucleus 34.78 36.59
Zm00001d018896_P002 Maize mitochondrion 38.23 36.12
HORVU5Hr1G104390.3 Barley plastid 35.98 34.88
AT1G09810.1 Thale cress nucleus 23.54 33.4
AT1G79270.1 Thale cress nucleus 26.09 32.95
AT5G58190.2 Thale cress nucleus 24.89 31.44
AT3G17330.1 Thale cress nucleus 27.89 31.26
AT1G27960.1 Thale cress cytosol 24.59 30.43
AT1G48110.2 Thale cress nucleus 28.79 30.05
Protein Annotations
MapMan:16.5.2.1Gene3D:3.10.590.10EntrezGene:820548UniProt:A0A178VBC2ProteinID:AEE75358.1ArrayExpress:AT3G13460
EnsemblPlantsGene:AT3G13460RefSeq:AT3G13460TAIR:AT3G13460RefSeq:AT3G13460-TAIR-GEnsemblPlants:AT3G13460.1TAIR:AT3G13460.1
EMBL:AY123992Unigene:At.23650ProteinID:BAB01753.1Symbol:ECT2GO:GO:0003674GO:GO:0003676
GO:GO:0003723GO:GO:0003729GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829InterPro:IPR007275RefSeq:NP_187955.2
ProteinID:OAP03216.1PFAM:PF04146PO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001017PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001170
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PFscan:PS50882
PANTHER:PTHR12357PANTHER:PTHR12357:SF63UniProt:Q9LJE5UniParc:UPI00000AA348InterPro:YTH_domainSEG:seg
Description
ECT2ECT2 [Source:UniProtKB/TrEMBL;Acc:A0A178VBC2]
Coordinates
chr3:-:4384563..4388592
Molecular Weight (calculated)
72479.0 Da
IEP (calculated)
5.751
GRAVY (calculated)
-0.767
Length
667 amino acids
Sequence
(BLAST)
001: MATVAPPADQ ATDLLQKLSL DSPAKASEIP EPNKKTAVYQ YGGVDVHGQV PSYDRSLTPM LPSDAADPSV CYVPNPYNPY QYYNVYGSGQ EWTDYPAYTN
101: PEGVDMNSGI YGENGTVVYP QGYGYAAYPY SPATSPAPQL GGEGQLYGAQ QYQYPNYFPN SGPYASSVAT PTQPDLSANK PAGVKTLPAD SNNVASAAGI
201: TKGSNGSAPV KPTNQATLNT SSNLYGMGAP GGGLAAGYQD PRYAYEGYYA PVPWHDGSKY SDVQRPVSGS GVASSYSKSS TVPSSRNQNY RSNSHYTSVH
301: QPSSVTGYGT AQGYYNRMYQ NKLYGQYGST GRSALGYGSS GYDSRTNGRG WAATDNKYRS WGRGNSYYYG NENNVDGLNE LNRGPRAKGT KNQKGNLDDS
401: LEVKEQTGES NVTEVGEADN TCVVPDREQY NKEDFPVDYA NAMFFIIKSY SEDDVHKSIK YNVWASTPNG NKKLAAAYQE AQQKAGGCPI FLFFSVNASG
501: QFVGLAEMTG PVDFNTNVEY WQQDKWTGSF PLKWHIVKDV PNSLLKHITL ENNENKPVTN SRDTQEVKLE QGLKIVKIFK EHSSKTCILD DFSFYEVRQK
601: TILEKKAKQT QKQVSEEKVT DEKKESATAE SASKESPAAV QTSSDVKVAE NGSVAKPVTG DVVANGC
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.