Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002008_P001 | Maize | cytosol | 34.84 | 73.97 |
| CDY05744 | Canola | cytosol | 21.29 | 26.19 |
| CDY57677 | Canola | mitochondrion | 25.81 | 23.39 |
| CDY43378 | Canola | nucleus | 89.68 | 22.64 |
| CDY24224 | Canola | nucleus | 87.1 | 21.99 |
| CDY23562 | Canola | nucleus | 85.81 | 21.45 |
| CDY44025 | Canola | nucleus | 85.81 | 21.38 |
| AT3G13060.2 | Thale cress | nucleus | 85.81 | 20.98 |
| CDX91541 | Canola | mitochondrion | 19.35 | 18.4 |
| GSMUA_Achr1P10560_001 | Banana | nucleus | 50.32 | 17.53 |
| CDY07437 | Canola | nucleus | 47.1 | 17.34 |
| CDY39299 | Canola | nucleus | 47.1 | 17.26 |
| CDY50448 | Canola | cytosol | 28.39 | 17.25 |
| CDY21154 | Canola | nucleus | 43.87 | 16.71 |
| CDX87395 | Canola | cytosol | 47.74 | 16.67 |
| CDY29972 | Canola | nucleus | 43.87 | 16.59 |
| CDY69959 | Canola | nucleus | 42.58 | 16.54 |
| CDX88524 | Canola | cytosol | 46.45 | 16.29 |
| CDY50867 | Canola | nucleus | 41.94 | 16.25 |
| CDY42891 | Canola | nucleus | 41.94 | 16.25 |
| CDY56132 | Canola | nucleus | 46.45 | 16.11 |
| CDY22270 | Canola | cytosol | 46.45 | 16.07 |
| CDY56809 | Canola | cytosol | 45.81 | 15.85 |
| GSMUA_Achr4P12480_001 | Banana | cytosol | 58.06 | 15.49 |
| CDY52966 | Canola | cytosol | 44.52 | 15.4 |
| CDY67303 | Canola | nucleus | 50.32 | 14.97 |
| CDX90116 | Canola | nucleus | 50.32 | 14.97 |
| Os04t0608800-01 | Rice | nucleus | 54.19 | 14.79 |
| KXG25412 | Sorghum | cytosol | 60.0 | 14.55 |
| Os08t0224200-01 | Rice | mitochondrion | 58.06 | 14.54 |
| Zm00001d008913_P001 | Maize | cytosol, nucleus, peroxisome | 37.42 | 14.54 |
| TraesCS7B01G182100.2 | Wheat | cytosol | 54.84 | 14.36 |
| Zm00001d031981_P002 | Maize | cytosol | 60.0 | 14.29 |
| TraesCS7A01G291700.1 | Wheat | cytosol | 54.19 | 14.24 |
| HORVU7Hr1G069070.2 | Barley | cytosol | 54.19 | 14.24 |
| CDX68000 | Canola | nucleus | 46.45 | 14.15 |
| EES14722 | Sorghum | nucleus | 54.19 | 14.14 |
| Os08t0556000-01 | Rice | nucleus | 56.77 | 14.1 |
| CDY11758 | Canola | nucleus, plastid | 50.32 | 14.08 |
| Zm00001d024339_P001 | Maize | extracellular | 53.55 | 14.02 |
| KXG27074 | Sorghum | cytosol | 49.68 | 13.95 |
| Zm00001d049360_P004 | Maize | extracellular | 52.9 | 13.76 |
| CDX79309 | Canola | nucleus | 45.16 | 13.75 |
| TraesCS7D01G285000.1 | Wheat | endoplasmic reticulum | 54.19 | 13.73 |
| GSMUA_Achr4P11560_001 | Banana | nucleus | 57.42 | 13.71 |
| TraesCS7B01G174500.1 | Wheat | nucleus | 52.9 | 13.69 |
| CDY60520 | Canola | cytosol | 11.61 | 13.64 |
| HORVU1Hr1G008330.2 | Barley | nucleus | 56.13 | 13.55 |
| CDY02802 | Canola | nucleus | 46.45 | 13.48 |
| CDY32718 | Canola | nucleus | 45.81 | 13.42 |
| CDY58572 | Canola | nucleus | 43.87 | 13.41 |
| Zm00001d002372_P002 | Maize | nucleus | 47.74 | 13.41 |
| CDX88661 | Canola | nucleus | 43.87 | 13.33 |
| TraesCS1A01G044500.1 | Wheat | nucleus | 54.84 | 13.24 |
| TraesCS7A01G276800.3 | Wheat | nucleus | 52.9 | 13.12 |
| TraesCS7D01G276800.4 | Wheat | nucleus | 52.9 | 13.12 |
| TraesCS1D01G045100.1 | Wheat | nucleus | 54.19 | 13.08 |
| TraesCS1B01G057800.3 | Wheat | nucleus | 52.9 | 12.77 |
| GSMUA_Achr4P04600_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 58.06 | 11.67 |
| Zm00001d047072_P001 | Maize | mitochondrion | 36.77 | 11.66 |
| CDY24182 | Canola | nucleus | 40.65 | 11.65 |
| CDX93645 | Canola | nucleus | 44.52 | 11.27 |
| CDY43306 | Canola | cytosol | 44.52 | 11.26 |
| CDY23602 | Canola | nucleus | 45.16 | 11.22 |
| CDY43989 | Canola | nucleus | 45.81 | 11.2 |
| CDX94944 | Canola | nucleus | 35.48 | 11.07 |
| CDX75712 | Canola | nucleus | 44.52 | 10.88 |
| CDX93476 | Canola | nucleus | 34.84 | 10.8 |
| CDX82538 | Canola | nucleus | 44.52 | 10.78 |
| CDY07089 | Canola | nucleus | 41.29 | 10.06 |
| HORVU7Hr1G058250.46 | Barley | cytosol, plastid | 9.68 | 3.16 |
Protein Annotations
| EnsemblPlants:CDY51902 | EnsemblPlantsGene:GSBRNA2T00004481001 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF24 | PFAM:PF04146 |
| PFscan:PS50882 | ProteinID:CDY51902 | ProteinID:CDY51902.1 | UniParc:UPI0004EDE030 | UniProt:A0A078IPP0 | MapMan:16.5.2.1 |
Description
BnaC03g73650DBnaC03g73650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPP0]
Coordinates
chrLK033038:-:38500..39051
Molecular Weight (calculated)
17465.5 Da
IEP (calculated)
6.273
GRAVY (calculated)
-0.577
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MIGPVDFVKS VEYWKQDKWS GQFPVKWHII KDVPNSQFRH IILENNDNKP VTNSRDTQEV SIEMLKIFKN YGAETSILDD FVFYEEREKV IQERKASRQP
101: SLPSGAGEPA SAALQSEFIK NMSKSFAQVV RLEEGSKASP DATTTTIAVS SGHSN
101: SLPSGAGEPA SAALQSEFIK NMSKSFAQVV RLEEGSKASP DATTTTIAVS SGHSN
001: MINEMFYHSN GVPSDFQRSS LSTRNQSSLQ HYGDLYADDS RYFVPFHLSN QQYPTPEDIH LSPEFHMFQA NSRHFDRHVN ERNSSEIDNM MRARGNSVLR
101: DNIYGEPRGM NLNPFSGENM FPPLASTRPC MRHLGSAELL ANDFNMGPAH GGLHDAFESA ANLSYREQAY AQCKRSPFSA SSSSPTWEND YNLPPLDEAR
201: SESYNDFSHC PAMLDMLTES NRGPRASRLN SKSKMISYDR VDRFCQQELL SQFRDAKFFV IKSYSEDNVH KSIKHCVWAS TKNGNKKLDA AYREAKKKDV
301: ACPVFLLFSV NASSQFCGVA EMVGPVDFNT SVEYWQQDRW SGHFPVQWLI VKDVPNSLFR HIIIESNDNK PVTNSRDTQE VGLEKGIEML DIFISCEMRS
401: SILDDFNFYE ERQIAIQDRK ARQRAVLESL ALSATSAPTY SLHDDFVREM SKHFAEALAL QHRPK
101: DNIYGEPRGM NLNPFSGENM FPPLASTRPC MRHLGSAELL ANDFNMGPAH GGLHDAFESA ANLSYREQAY AQCKRSPFSA SSSSPTWEND YNLPPLDEAR
201: SESYNDFSHC PAMLDMLTES NRGPRASRLN SKSKMISYDR VDRFCQQELL SQFRDAKFFV IKSYSEDNVH KSIKHCVWAS TKNGNKKLDA AYREAKKKDV
301: ACPVFLLFSV NASSQFCGVA EMVGPVDFNT SVEYWQQDRW SGHFPVQWLI VKDVPNSLFR HIIIESNDNK PVTNSRDTQE VGLEKGIEML DIFISCEMRS
401: SILDDFNFYE ERQIAIQDRK ARQRAVLESL ALSATSAPTY SLHDDFVREM SKHFAEALAL QHRPK
Arabidopsis Description
ECT9At1g27960 [Source:UniProtKB/TrEMBL;Acc:Q500V8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.