Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036423.1-P | Field mustard | nucleus | 98.03 | 98.28 |
| CDY29972 | Canola | nucleus | 94.35 | 93.66 |
| CDY42891 | Canola | nucleus | 80.34 | 81.75 |
| CDY50867 | Canola | nucleus | 80.34 | 81.75 |
| CDY69959 | Canola | nucleus | 79.61 | 81.2 |
| AT3G03950.3 | Thale cress | cytosol | 78.38 | 74.53 |
| CDY57677 | Canola | mitochondrion | 19.9 | 47.37 |
| CDY51902 | Canola | cytosol | 16.71 | 43.87 |
| CDY07437 | Canola | nucleus | 42.75 | 41.33 |
| CDY39299 | Canola | nucleus | 42.01 | 40.43 |
| CDY05744 | Canola | cytosol | 11.79 | 38.1 |
| CDY56132 | Canola | nucleus | 41.77 | 38.03 |
| CDY50448 | Canola | cytosol | 23.59 | 37.65 |
| CDY52966 | Canola | cytosol | 41.03 | 37.28 |
| CDX91541 | Canola | mitochondrion | 14.74 | 36.81 |
| GSMUA_Achr4P14820_001 | Banana | cytosol | 27.76 | 34.14 |
| GSMUA_Achr7P01490_001 | Banana | nucleus | 44.96 | 32.68 |
| CDY23602 | Canola | nucleus | 47.17 | 30.77 |
| CDY43989 | Canola | nucleus | 47.42 | 30.44 |
| CDX82538 | Canola | nucleus | 47.67 | 30.31 |
| GSMUA_Achr4P22630_001 | Banana | nucleus | 46.19 | 30.27 |
| CDX75712 | Canola | nucleus | 46.93 | 30.13 |
| GSMUA_Achr5P02830_001 | Banana | cytosol | 45.21 | 29.87 |
| EER93461 | Sorghum | nucleus | 47.67 | 29.44 |
| EER93313 | Sorghum | cytosol | 41.28 | 29.37 |
| GSMUA_Achr4P21380_001 | Banana | nucleus | 47.17 | 29.18 |
| VIT_08s0007g07450.t01 | Wine grape | cytosol | 49.63 | 29.11 |
| Os03t0748000-01 | Rice | plasma membrane | 47.17 | 29.05 |
| GSMUA_Achr4P28430_001 | Banana | nucleus, plastid | 43.73 | 28.94 |
| Zm00001d034005_P003 | Maize | plasma membrane | 46.93 | 28.94 |
| CDY07089 | Canola | nucleus | 45.21 | 28.93 |
| CDY24182 | Canola | nucleus | 38.08 | 28.65 |
| CDY22270 | Canola | cytosol | 31.45 | 28.57 |
| CDY56809 | Canola | cytosol | 31.2 | 28.35 |
| TraesCS5D01G396400.3 | Wheat | nucleus | 45.45 | 27.95 |
| TraesCS5A01G386600.2 | Wheat | nucleus | 45.45 | 27.9 |
| TraesCS5B01G391500.1 | Wheat | nucleus | 45.21 | 27.79 |
| CDX87395 | Canola | cytosol | 30.22 | 27.7 |
| TraesCS5D01G439100.1 | Wheat | nucleus | 39.8 | 27.55 |
| TraesCS5A01G431200.1 | Wheat | nucleus | 39.8 | 27.5 |
| Os07t0170300-01 | Rice | plasma membrane | 40.54 | 27.41 |
| GSMUA_Achr7P27220_001 | Banana | cytosol | 44.47 | 27.38 |
| CDX88524 | Canola | cytosol | 29.73 | 27.38 |
| HORVU5Hr1G094950.6 | Barley | cytosol, nucleus | 44.72 | 27.37 |
| TraesCS5B01G433000.1 | Wheat | cytosol | 39.8 | 27.18 |
| KRH70155 | Soybean | nucleus | 41.52 | 26.83 |
| CDX94944 | Canola | nucleus | 32.68 | 26.76 |
| CDY23562 | Canola | nucleus | 40.29 | 26.45 |
| KRG94807 | Soybean | nucleus | 42.51 | 26.25 |
| CDY44025 | Canola | nucleus | 40.05 | 26.21 |
| Os03t0158500-01 | Rice | nucleus | 45.45 | 26.17 |
| KXG40139 | Sorghum | plastid | 45.7 | 26.16 |
| TraesCS5A01G431100.1 | Wheat | cytosol | 41.03 | 26.01 |
| CDX93476 | Canola | nucleus | 31.7 | 25.8 |
| CDY67303 | Canola | nucleus | 32.92 | 25.72 |
| CDX90116 | Canola | nucleus | 32.92 | 25.72 |
| TraesCS5D01G439200.1 | Wheat | cytosol | 40.54 | 25.7 |
| KXG34475 | Sorghum | cytosol | 40.79 | 25.7 |
| CDY43378 | Canola | nucleus | 38.57 | 25.57 |
| CDY24224 | Canola | nucleus | 38.57 | 25.57 |
| TraesCS5B01G432900.2 | Wheat | extracellular | 40.54 | 25.46 |
| CDX68000 | Canola | nucleus | 31.7 | 25.34 |
| KRH06717 | Soybean | nucleus | 41.28 | 25.34 |
| CDX79309 | Canola | nucleus | 31.45 | 25.15 |
| HORVU5Hr1G104380.1 | Barley | plastid | 40.79 | 25.11 |
| CDX88661 | Canola | nucleus | 31.45 | 25.1 |
| CDY58572 | Canola | nucleus | 30.96 | 24.85 |
| Zm00001d007890_P002 | Maize | mitochondrion | 39.8 | 24.81 |
| CDY32718 | Canola | nucleus | 32.19 | 24.76 |
| CDY02802 | Canola | nucleus | 32.43 | 24.72 |
| HORVU4Hr1G072940.4 | Barley | cytosol | 44.23 | 24.26 |
| TraesCS4D01G273200.4 | Wheat | cytosol | 43.0 | 24.2 |
| Zm00001d048424_P003 | Maize | plastid | 43.98 | 24.19 |
| CDY11758 | Canola | nucleus, plastid | 32.92 | 24.19 |
| TraesCS4A01G031600.2 | Wheat | cytosol | 43.24 | 24.14 |
| TraesCS4B01G274500.2 | Wheat | plastid | 44.72 | 23.73 |
| CDY60520 | Canola | cytosol | 7.62 | 23.48 |
| Zm00001d018896_P002 | Maize | mitochondrion | 40.54 | 23.37 |
| HORVU5Hr1G104390.3 | Barley | plastid | 39.31 | 23.26 |
| Zm00001d027731_P012 | Maize | plastid | 45.45 | 23.04 |
| CDX93645 | Canola | nucleus | 31.7 | 21.08 |
| CDY43306 | Canola | cytosol | 31.2 | 20.72 |
Protein Annotations
| EnsemblPlants:CDY21154 | EnsemblPlantsGene:GSBRNA2T00015343001 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF56 | PFAM:PF04146 |
| PFscan:PS50882 | ProteinID:CDY21154 | ProteinID:CDY21154.1 | SEG:seg | UniParc:UPI0004EF1CEB | UniProt:A0A078G6X4 |
| MapMan:16.5.2.1 | : | : | : | : | : |
Description
BnaA01g33850DBnaA01g33850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6X4]
Coordinates
chrLK032116:-:330589..333029
Molecular Weight (calculated)
45789.4 Da
IEP (calculated)
7.317
GRAVY (calculated)
-0.666
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGTASSPDT LATGLSLLET ADLFQELSLG SDGSEASRNR NKKGSLQQQY GHVPSGAFTA PSLHGSERRP NLNVGDFFGS YPWGYLPTNH PSGGYQDQSF
101: GYGHNSSLNT YSHLMNPNSS QEALSYDQFG YNDHMYSNNG LYGLYGNVID SGHAYGTFGY DSWKLGRGWY PVDGYKKTRS FNYGRGYSEE KADRLNELCR
201: GPRSSEGLNS TVKQDSPVVE NFPETLVNAK FFVIKSYSED DVHNSIKYGM WSSTPTGNKK LNAAYQESSQ DCPVYLLFSV NASGQFVGVA EMIGAVDFNK
301: TMEYWQQDKW IGCFPVKWRI IKDVPNSLLR HITLVNNENK PVTNSRDTQE VKLEDGIKII KIFKEYMSKT CILDDFKFYE TRQKIIRDKK IKQKKQVLDG
401: ATVETIH
101: GYGHNSSLNT YSHLMNPNSS QEALSYDQFG YNDHMYSNNG LYGLYGNVID SGHAYGTFGY DSWKLGRGWY PVDGYKKTRS FNYGRGYSEE KADRLNELCR
201: GPRSSEGLNS TVKQDSPVVE NFPETLVNAK FFVIKSYSED DVHNSIKYGM WSSTPTGNKK LNAAYQESSQ DCPVYLLFSV NASGQFVGVA EMIGAVDFNK
301: TMEYWQQDKW IGCFPVKWRI IKDVPNSLLR HITLVNNENK PVTNSRDTQE VKLEDGIKII KIFKEYMSKT CILDDFKFYE TRQKIIRDKK IKQKKQVLDG
401: ATVETIH
001: MAGAASSDRL VTSFPLLDTA DLFQDLSLGS DANEVPMNFT KGSFQHPYGH APYGASSHGS ERRPNMNAGN LLNGGDSIGS YPWGYIPANY PSGGYPDPRF
101: GYDRNSNHSS FSHLMNPHSS QEVPSFDQLG YNDHLYSNHG LYGLYGNVID SGHAYGTFGY DSWKLGRGWY PVDGYRKTRS FNHGRGYSDE KADRLNELCR
201: GPRSSDFKNP QVLNSSMLDA MKQDVSAVDL QRYNGENFPE SFVKAKFFVI KSYSEDDVHN CIKYGAWSST PTGNKKLNAA YYEAKENSQE CPVYLLFSVN
301: ASGQFVGLAE MVGPVDFNKT MEYWQQDKWI GCFPVKWHII KDIPNSLLRH ITLANNENKP VTNSRDTQEV NLEHGTKIIK IFKEYMSKTC ILDDYKFYET
401: RQKIIRDKKI KQKKQALDGA SGETINLS
101: GYDRNSNHSS FSHLMNPHSS QEVPSFDQLG YNDHLYSNHG LYGLYGNVID SGHAYGTFGY DSWKLGRGWY PVDGYRKTRS FNHGRGYSDE KADRLNELCR
201: GPRSSDFKNP QVLNSSMLDA MKQDVSAVDL QRYNGENFPE SFVKAKFFVI KSYSEDDVHN CIKYGAWSST PTGNKKLNAA YYEAKENSQE CPVYLLFSVN
301: ASGQFVGLAE MVGPVDFNKT MEYWQQDKWI GCFPVKWHII KDIPNSLLRH ITLANNENKP VTNSRDTQEV NLEHGTKIIK IFKEYMSKTC ILDDYKFYET
401: RQKIIRDKKI KQKKQALDGA SGETINLS
Arabidopsis Description
ECT1AT3G03950 protein [Source:UniProtKB/TrEMBL;Acc:Q3MK94]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.