Factsheet for VIT_08s0007g07450.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g00200.t01	Wine grape	nucleus	63.83	62.84
GSMUA_Achr7P01490_001	Banana	nucleus	48.27	59.82
GSMUA_Achr4P22630_001	Banana	nucleus	49.57	55.39
GSMUA_Achr4P21380_001	Banana	nucleus	52.45	55.32
CDY57677	Canola	mitochondrion	13.54	54.97
GSMUA_Achr7P27220_001	Banana	cytosol	51.73	54.31
GSMUA_Achr5P02830_001	Banana	cytosol	47.41	53.41
CDY07437	Canola	nucleus	32.13	52.97
GSMUA_Achr4P28430_001	Banana	nucleus, plastid	46.4	52.36
CDY39299	Canola	nucleus	31.41	51.54
Bra004105.1-P	Field mustard	nucleus	29.39	51.52
Os03t0748000-01	Rice	plasma membrane	48.41	50.83
CDY56132	Canola	nucleus	32.71	50.78
KRG94807	Soybean	nucleus	48.13	50.68
EER93461	Sorghum	nucleus	48.13	50.68
CDY52966	Canola	cytosol	32.71	50.67
Bra008509.1-P	Field mustard	cytosol	30.55	50.12
CDY21154	Canola	nucleus	29.11	49.63
GSMUA_Achr4P14820_001	Banana	cytosol	23.63	49.55
Zm00001d034005_P003	Maize	plasma membrane	46.97	49.39
Bra036423.1-P	Field mustard	nucleus	28.82	49.26
Os03t0158500-01	Rice	nucleus	50.14	49.22
KRH06717	Soybean	nucleus	46.97	49.17
CDX91541	Canola	mitochondrion	11.53	49.08
CDY50448	Canola	cytosol	18.01	49.02
CDY29972	Canola	nucleus	28.82	48.78
CDY69959	Canola	nucleus	27.81	48.37
Bra031960.1-P	Field mustard	nucleus	27.52	48.23
TraesCS5B01G391500.1	Wheat	nucleus	45.82	48.04
CDY50867	Canola	nucleus	27.67	48.0
CDY42891	Canola	nucleus	27.67	48.0
TraesCS5D01G396400.3	Wheat	nucleus	45.68	47.89
TraesCS5A01G386600.2	Wheat	nucleus	45.68	47.81
KRH70155	Soybean	nucleus	43.37	47.78
HORVU5Hr1G094950.6	Barley	cytosol, nucleus	45.39	47.37
KXG40139	Sorghum	plastid	48.41	47.26
AT3G03950.3	Thale cress	cytosol	28.96	46.96
TraesCS4D01G273200.4	Wheat	cytosol	47.98	46.06
TraesCS4A01G031600.2	Wheat	cytosol	47.55	45.27
EER93313	Sorghum	cytosol	36.89	44.76
HORVU4Hr1G072940.4	Barley	cytosol	47.84	44.74
Os07t0170300-01	Rice	plasma membrane	38.62	44.52
TraesCS4B01G274500.2	Wheat	plastid	48.99	44.33
AT5G61020.1	Thale cress	cytosol	31.41	44.04
Zm00001d048424_P003	Maize	plastid	46.25	43.38
TraesCS5B01G433000.1	Wheat	cytosol	37.03	43.12
TraesCS5A01G431200.1	Wheat	nucleus	36.46	42.95
KXG34475	Sorghum	cytosol	39.77	42.72
TraesCS5D01G439100.1	Wheat	nucleus	36.17	42.69
Zm00001d027731_P012	Maize	plastid	47.41	40.97
Bra018951.1-P	Field mustard	cytosol	15.27	40.93
TraesCS5A01G431100.1	Wheat	cytosol	37.32	40.34
Zm00001d007890_P002	Maize	mitochondrion	37.9	40.28
TraesCS5B01G432900.2	Wheat	extracellular	37.46	40.12
TraesCS5D01G439200.1	Wheat	cytosol	37.03	40.03
Bra038524.1-P	Field mustard	cytosol	12.82	39.56
Bra014253.1-P	Field mustard	cytosol	16.86	39.26
Zm00001d018896_P002	Maize	mitochondrion	39.63	38.95
HORVU5Hr1G104380.1	Barley	plastid	37.03	38.88
HORVU5Hr1G104390.3	Barley	plastid	36.74	37.06
VIT_19s0085g01100.t01	Wine grape	nucleus	30.12	35.36
VIT_09s0054g01600.t01	Wine grape	nucleus	33.86	35.29
VIT_01s0010g03690.t01	Wine grape	cytosol	28.24	34.27
VIT_05s0020g00460.t01	Wine grape	cytosol	29.97	29.13
VIT_11s0065g00160.t01	Wine grape	nucleus	30.55	28.84
VIT_12s0035g00970.t01	Wine grape	plastid	27.95	27.4

Protein Annotations

EntrezGene:100245287	MapMan:16.5.2.1	Gene3D:3.10.590.10	ProteinID:CBI29937	ProteinID:CBI29937.3	UniProt:D7TI61
EMBL:FN595991	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR007275	PFAM:PF04146	PFscan:PS50882	PANTHER:PTHR12357
PANTHER:PTHR12357:SF63	TIGR:TC53786	UniParc:UPI0001BE351E	ArrayExpress:VIT_08s0007g07450	EnsemblPlantsGene:VIT_08s0007g07450	EnsemblPlants:VIT_08s0007g07450.t01
RefSeq:XP_010653842.1	InterPro:YTH_domain	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr8:+:20978933..20983964

Molecular Weight (calculated)

75635.8 Da

IEP (calculated)

7.463

GRAVY (calculated)

-0.694

Length

694 amino acids

Sequence
(BLAST)

001: MATVAPPSDQ AADLLQKLSL DPQAKSLEVS EQAKKFVSVD SGDLANGLGK PFERSATHLH QDFVDPNMCY LPNGYPSTYY FAPGYDGQMN EWGDGVEMPP
101: GVYGDIYHHG FGYPYGTYPP PGSPVPTMGH DGQLYGPQHY QYPTPYYQPQ APNGGPYAPS QVTAPQGDVS TSVAPDQVPL SVEAAKGNTN NLVNGGNVNG
201: NNGPKALRPS HQNSSLSSNG SYGRASLPTG VPSSGYQDPR FGFDGTRSLI PSADMFSEGQ SKHVASVGFS SPVSHANNFP SGRNQNFRPI PQLMHARAAS
301: GLGQASGFMS RMYPNNRMYD QYGNAFRTGS GFGSNGYDSR TSGRGWLTVD SRYRNKSRAN SVLGYGNENM DGLNELNRGP RAKGFKNQKG FGPVTLAVRG
401: QNLQLNGNNS NSDGNLTLVP DKEQYNSEDF PENYSDAKFF IIKSYSEDDV HKSIKYNMWA STANGNKKLD AAYQEAQGKS GSCPIFLLFS VNASGQFVGV
501: AEMVGSVDFN RSLEYWQQDK WTGCFPVKWH VIKDIPNSLL KHITLENNEN KPVTNSRDTQ EVKFEQGIQV LKIFKNHSSK TTILDDFGFY EARQRTMQEK
601: KAKQQLFQKQ ARILVRDVKP TDGVATDDKD RLHQSVDVAS SLIKEPTGPV KANGELKALE EIGSAAVADD APKSAKPDVL SEKRVVPNGV ANAC

Best Arabidopsis Sequence Match ( AT3G13460.1 )
(BLAST)

001: MATVAPPADQ ATDLLQKLSL DSPAKASEIP EPNKKTAVYQ YGGVDVHGQV PSYDRSLTPM LPSDAADPSV CYVPNPYNPY QYYNVYGSGQ EWTDYPAYTN
101: PEGVDMNSGI YGENGTVVYP QGYGYAAYPY SPATSPAPQL GGEGQLYGAQ QYQYPNYFPN SGPYASSVAT PTQPDLSANK PAGVKTLPAD SNNVASAAGI
201: TKGSNGSAPV KPTNQATLNT SSNLYGMGAP GGGLAAGYQD PRYAYEGYYA PVPWHDGSKY SDVQRPVSGS GVASSYSKSS TVPSSRNQNY RSNSHYTSVH
301: QPSSVTGYGT AQGYYNRMYQ NKLYGQYGST GRSALGYGSS GYDSRTNGRG WAATDNKYRS WGRGNSYYYG NENNVDGLNE LNRGPRAKGT KNQKGNLDDS
401: LEVKEQTGES NVTEVGEADN TCVVPDREQY NKEDFPVDYA NAMFFIIKSY SEDDVHKSIK YNVWASTPNG NKKLAAAYQE AQQKAGGCPI FLFFSVNASG
501: QFVGLAEMTG PVDFNTNVEY WQQDKWTGSF PLKWHIVKDV PNSLLKHITL ENNENKPVTN SRDTQEVKLE QGLKIVKIFK EHSSKTCILD DFSFYEVRQK
601: TILEKKAKQT QKQVSEEKVT DEKKESATAE SASKESPAAV QTSSDVKVAE NGSVAKPVTG DVVANGC

Arabidopsis Description

ECT2ECT2 [Source:UniProtKB/TrEMBL;Acc:A0A178VBC2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.