Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42891 | Canola | nucleus | 100.0 | 100.0 |
| CDY69959 | Canola | nucleus | 89.25 | 89.47 |
| Bra031960.1-P | Field mustard | nucleus | 88.25 | 89.14 |
| CDY21154 | Canola | nucleus | 81.75 | 80.34 |
| CDY29972 | Canola | nucleus | 81.75 | 79.76 |
| AT3G03950.3 | Thale cress | cytosol | 79.5 | 74.3 |
| CDY57677 | Canola | mitochondrion | 19.25 | 45.03 |
| CDY51902 | Canola | cytosol | 16.25 | 41.94 |
| CDY07437 | Canola | nucleus | 42.25 | 40.14 |
| CDY39299 | Canola | nucleus | 41.75 | 39.48 |
| CDY05744 | Canola | cytosol | 11.75 | 37.3 |
| CDY50448 | Canola | cytosol | 23.5 | 36.86 |
| CDY56132 | Canola | nucleus | 41.0 | 36.69 |
| CDY52966 | Canola | cytosol | 40.5 | 36.16 |
| CDX91541 | Canola | mitochondrion | 14.5 | 35.58 |
| GSMUA_Achr4P14820_001 | Banana | cytosol | 28.25 | 34.14 |
| GSMUA_Achr7P01490_001 | Banana | nucleus | 44.25 | 31.61 |
| CDY23602 | Canola | nucleus | 48.0 | 30.77 |
| CDY43989 | Canola | nucleus | 48.25 | 30.44 |
| CDX82538 | Canola | nucleus | 47.25 | 29.53 |
| CDY22270 | Canola | cytosol | 33.0 | 29.46 |
| CDX87395 | Canola | cytosol | 32.5 | 29.28 |
| CDY56809 | Canola | cytosol | 32.75 | 29.24 |
| CDX88524 | Canola | cytosol | 32.25 | 29.19 |
| CDX75712 | Canola | nucleus | 46.25 | 29.18 |
| GSMUA_Achr4P22630_001 | Banana | nucleus | 45.0 | 28.99 |
| EER93313 | Sorghum | cytosol | 41.25 | 28.85 |
| EER93461 | Sorghum | nucleus | 47.25 | 28.68 |
| Os03t0748000-01 | Rice | plasma membrane | 47.0 | 28.44 |
| GSMUA_Achr5P02830_001 | Banana | cytosol | 43.75 | 28.41 |
| CDY07089 | Canola | nucleus | 45.0 | 28.3 |
| Zm00001d034005_P003 | Maize | plasma membrane | 46.5 | 28.18 |
| GSMUA_Achr4P21380_001 | Banana | nucleus | 46.25 | 28.12 |
| TraesCS5D01G396400.3 | Wheat | nucleus | 46.0 | 27.79 |
| CDY24182 | Canola | nucleus | 37.5 | 27.73 |
| VIT_08s0007g07450.t01 | Wine grape | cytosol | 48.0 | 27.67 |
| TraesCS5B01G391500.1 | Wheat | nucleus | 45.75 | 27.64 |
| TraesCS5A01G386600.2 | Wheat | nucleus | 45.75 | 27.6 |
| GSMUA_Achr7P27220_001 | Banana | cytosol | 45.5 | 27.53 |
| GSMUA_Achr4P28430_001 | Banana | nucleus, plastid | 42.25 | 27.48 |
| HORVU5Hr1G094950.6 | Barley | cytosol, nucleus | 45.25 | 27.22 |
| Os07t0170300-01 | Rice | plasma membrane | 40.75 | 27.08 |
| TraesCS5D01G439100.1 | Wheat | nucleus | 39.25 | 26.7 |
| TraesCS5A01G431200.1 | Wheat | nucleus | 39.25 | 26.66 |
| CDX68000 | Canola | nucleus | 33.75 | 26.52 |
| CDX79309 | Canola | nucleus | 33.75 | 26.52 |
| CDX94944 | Canola | nucleus | 32.75 | 26.36 |
| TraesCS5B01G433000.1 | Wheat | cytosol | 39.25 | 26.34 |
| KRH70155 | Soybean | nucleus | 41.25 | 26.19 |
| CDY67303 | Canola | nucleus | 34.0 | 26.1 |
| CDX90116 | Canola | nucleus | 34.0 | 26.1 |
| CDX88661 | Canola | nucleus | 33.25 | 26.08 |
| KXG40139 | Sorghum | plastid | 45.5 | 25.6 |
| KRG94807 | Soybean | nucleus | 42.0 | 25.49 |
| CDY58572 | Canola | nucleus | 32.25 | 25.44 |
| CDX93476 | Canola | nucleus | 31.75 | 25.4 |
| CDY23562 | Canola | nucleus | 39.25 | 25.32 |
| Os03t0158500-01 | Rice | nucleus | 44.75 | 25.32 |
| KXG34475 | Sorghum | cytosol | 40.75 | 25.23 |
| CDY43378 | Canola | nucleus | 38.5 | 25.08 |
| CDY24224 | Canola | nucleus | 38.5 | 25.08 |
| CDY32718 | Canola | nucleus | 33.0 | 24.95 |
| CDY44025 | Canola | nucleus | 38.75 | 24.92 |
| CDY02802 | Canola | nucleus | 33.25 | 24.91 |
| KRH06717 | Soybean | nucleus | 41.25 | 24.89 |
| Zm00001d007890_P002 | Maize | mitochondrion | 40.5 | 24.81 |
| TraesCS5A01G431100.1 | Wheat | cytosol | 39.75 | 24.77 |
| TraesCS5D01G439200.1 | Wheat | cytosol | 39.5 | 24.61 |
| CDY11758 | Canola | nucleus, plastid | 34.0 | 24.55 |
| TraesCS5B01G432900.2 | Wheat | extracellular | 39.5 | 24.38 |
| TraesCS4D01G273200.4 | Wheat | cytosol | 43.75 | 24.2 |
| TraesCS4A01G031600.2 | Wheat | cytosol | 44.0 | 24.14 |
| HORVU5Hr1G104380.1 | Barley | plastid | 39.75 | 24.05 |
| HORVU4Hr1G072940.4 | Barley | cytosol | 44.25 | 23.85 |
| Zm00001d048424_P003 | Maize | plastid | 43.75 | 23.65 |
| TraesCS4B01G274500.2 | Wheat | plastid | 44.5 | 23.21 |
| Zm00001d018896_P002 | Maize | mitochondrion | 40.75 | 23.09 |
| CDY60520 | Canola | cytosol | 7.5 | 22.73 |
| Zm00001d027731_P012 | Maize | plastid | 45.5 | 22.66 |
| HORVU5Hr1G104390.3 | Barley | plastid | 38.5 | 22.38 |
| CDX93645 | Canola | nucleus | 32.75 | 21.41 |
| CDY43306 | Canola | cytosol | 32.75 | 21.37 |
Protein Annotations
| EnsemblPlants:CDY50867 | EnsemblPlantsGene:GSBRNA2T00097696001 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF56 | PFAM:PF04146 |
| PFscan:PS50882 | ProteinID:CDY42891.1 | ProteinID:CDY50867 | ProteinID:CDY50867.1 | SEG:seg | UniParc:UPI0004EF0E3F |
| UniProt:A0A078HZ06 | MapMan:16.5.2.1 | : | : | : | : |
Description
BnaA05g37280DBnaA05g37280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZ06]
Coordinates
chrLK032945:+:39232..41000
Molecular Weight (calculated)
45357.4 Da
IEP (calculated)
7.027
GRAVY (calculated)
-0.758
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MIGAETSDWF QELSLGSDAS ETPRNHYKGS LQQHYGHVPC GAYTAPSSHG SERKPNLNVG NVINGGDPFG SYPWGYYPSG GYQDQSFGYG HNNNSNTFSH
101: LMTDPHNSSF DQFGYNDHLY SNQGLYGLYG NVIDSGHAYG TFGYDSWKLG RDWYPVDGYR KSRSFNYGRG YSEEKADRLN ELCRGPRSSE GLSSTTKQDA
201: PMAVDLHRYN GESFPETFTK AKFFVIKSYS EDDVHNSIKH GVWSSTPTGN KKLNAAYYEA QESCCPVYLL FSVNASGQFV GVAEMTGPVD FNKTVEYWQQ
301: DKWIGCFPVK WRIIKDVPNS FLRHVTIANN ENKPVTNSRD TQEVSVEDGT KIIKIFKEYM SKTCILDDFK FYETRQKMIR DKKIKQKKQV LDVASVETIH
101: LMTDPHNSSF DQFGYNDHLY SNQGLYGLYG NVIDSGHAYG TFGYDSWKLG RDWYPVDGYR KSRSFNYGRG YSEEKADRLN ELCRGPRSSE GLSSTTKQDA
201: PMAVDLHRYN GESFPETFTK AKFFVIKSYS EDDVHNSIKH GVWSSTPTGN KKLNAAYYEA QESCCPVYLL FSVNASGQFV GVAEMTGPVD FNKTVEYWQQ
301: DKWIGCFPVK WRIIKDVPNS FLRHVTIANN ENKPVTNSRD TQEVSVEDGT KIIKIFKEYM SKTCILDDFK FYETRQKMIR DKKIKQKKQV LDVASVETIH
001: MAGAASSDRL VTSFPLLDTA DLFQDLSLGS DANEVPMNFT KGSFQHPYGH APYGASSHGS ERRPNMNAGN LLNGGDSIGS YPWGYIPANY PSGGYPDPRF
101: GYDRNSNHSS FSHLMNPHSS QEVPSFDQLG YNDHLYSNHG LYGLYGNVID SGHAYGTFGY DSWKLGRGWY PVDGYRKTRS FNHGRGYSDE KADRLNELCR
201: GPRSSDFKNP QVLNSSMLDA MKQDVSAVDL QRYNGENFPE SFVKAKFFVI KSYSEDDVHN CIKYGAWSST PTGNKKLNAA YYEAKENSQE CPVYLLFSVN
301: ASGQFVGLAE MVGPVDFNKT MEYWQQDKWI GCFPVKWHII KDIPNSLLRH ITLANNENKP VTNSRDTQEV NLEHGTKIIK IFKEYMSKTC ILDDYKFYET
401: RQKIIRDKKI KQKKQALDGA SGETINLS
101: GYDRNSNHSS FSHLMNPHSS QEVPSFDQLG YNDHLYSNHG LYGLYGNVID SGHAYGTFGY DSWKLGRGWY PVDGYRKTRS FNHGRGYSDE KADRLNELCR
201: GPRSSDFKNP QVLNSSMLDA MKQDVSAVDL QRYNGENFPE SFVKAKFFVI KSYSEDDVHN CIKYGAWSST PTGNKKLNAA YYEAKENSQE CPVYLLFSVN
301: ASGQFVGLAE MVGPVDFNKT MEYWQQDKWI GCFPVKWHII KDIPNSLLRH ITLANNENKP VTNSRDTQEV NLEHGTKIIK IFKEYMSKTC ILDDYKFYET
401: RQKIIRDKKI KQKKQALDGA SGETINLS
Arabidopsis Description
ECT1AT3G03950 protein [Source:UniProtKB/TrEMBL;Acc:Q3MK94]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.