Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39299 | Canola | nucleus | 96.91 | 96.45 |
| CDY57677 | Canola | mitochondrion | 30.4 | 74.85 |
| CDY50448 | Canola | cytosol | 44.89 | 74.12 |
| CDY56132 | Canola | nucleus | 76.96 | 72.48 |
| CDY52966 | Canola | cytosol | 76.72 | 72.1 |
| CDX91541 | Canola | mitochondrion | 27.79 | 71.78 |
| AT5G61020.1 | Thale cress | cytosol | 65.8 | 55.96 |
| CDY51902 | Canola | cytosol | 17.34 | 47.1 |
| CDY69959 | Canola | nucleus | 40.62 | 42.86 |
| CDY21154 | Canola | nucleus | 41.33 | 42.75 |
| CDY29972 | Canola | nucleus | 41.33 | 42.44 |
| CDY50867 | Canola | nucleus | 40.14 | 42.25 |
| CDY42891 | Canola | nucleus | 40.14 | 42.25 |
| CDY05744 | Canola | cytosol | 10.69 | 35.71 |
| GSMUA_Achr4P14820_001 | Banana | cytosol | 27.55 | 35.05 |
| CDX82538 | Canola | nucleus | 50.83 | 33.44 |
| CDY23602 | Canola | nucleus | 49.41 | 33.33 |
| CDX75712 | Canola | nucleus | 50.12 | 33.28 |
| CDY43989 | Canola | nucleus | 49.64 | 32.97 |
| CDY24182 | Canola | nucleus | 42.04 | 32.72 |
| CDY07089 | Canola | nucleus | 49.17 | 32.55 |
| EER93313 | Sorghum | cytosol | 43.94 | 32.34 |
| GSMUA_Achr7P01490_001 | Banana | nucleus | 42.99 | 32.32 |
| VIT_08s0007g07450.t01 | Wine grape | cytosol | 52.97 | 32.13 |
| TraesCS5A01G431200.1 | Wheat | nucleus | 43.47 | 31.07 |
| KRH70155 | Soybean | nucleus | 46.08 | 30.79 |
| TraesCS5D01G439100.1 | Wheat | nucleus | 42.76 | 30.61 |
| GSMUA_Achr4P22630_001 | Banana | nucleus | 45.13 | 30.6 |
| GSMUA_Achr4P21380_001 | Banana | nucleus | 47.03 | 30.09 |
| CDX88524 | Canola | cytosol | 31.59 | 30.09 |
| GSMUA_Achr5P02830_001 | Banana | cytosol | 43.94 | 30.03 |
| CDX87395 | Canola | cytosol | 31.59 | 29.95 |
| CDY22270 | Canola | cytosol | 31.83 | 29.91 |
| TraesCS5A01G431100.1 | Wheat | cytosol | 45.61 | 29.91 |
| TraesCS5D01G439200.1 | Wheat | cytosol | 45.61 | 29.91 |
| TraesCS5B01G433000.1 | Wheat | cytosol | 42.28 | 29.87 |
| CDY56809 | Canola | cytosol | 31.59 | 29.69 |
| Os07t0170300-01 | Rice | plasma membrane | 42.28 | 29.57 |
| TraesCS5B01G432900.2 | Wheat | extracellular | 45.37 | 29.48 |
| EER93461 | Sorghum | nucleus | 46.08 | 29.44 |
| GSMUA_Achr4P28430_001 | Banana | nucleus, plastid | 42.99 | 29.43 |
| KRG94807 | Soybean | nucleus | 45.61 | 29.14 |
| Zm00001d034005_P003 | Maize | plasma membrane | 45.61 | 29.09 |
| TraesCS5A01G386600.2 | Wheat | nucleus | 45.61 | 28.96 |
| KRH06717 | Soybean | nucleus | 45.61 | 28.96 |
| Os03t0748000-01 | Rice | plasma membrane | 45.37 | 28.9 |
| TraesCS5D01G396400.3 | Wheat | nucleus | 45.37 | 28.85 |
| TraesCS5B01G391500.1 | Wheat | nucleus | 45.37 | 28.85 |
| KXG34475 | Sorghum | cytosol | 44.18 | 28.79 |
| HORVU5Hr1G094950.6 | Barley | cytosol, nucleus | 45.13 | 28.57 |
| CDX68000 | Canola | nucleus | 33.97 | 28.09 |
| CDX79309 | Canola | nucleus | 33.97 | 28.09 |
| Os03t0158500-01 | Rice | nucleus | 47.03 | 28.01 |
| GSMUA_Achr7P27220_001 | Banana | cytosol | 43.71 | 27.84 |
| HORVU5Hr1G104380.1 | Barley | plastid | 43.71 | 27.84 |
| KXG40139 | Sorghum | plastid | 46.32 | 27.43 |
| CDY44025 | Canola | nucleus | 40.14 | 27.17 |
| Zm00001d007890_P002 | Maize | mitochondrion | 42.04 | 27.11 |
| CDY24224 | Canola | nucleus | 39.43 | 27.04 |
| HORVU5Hr1G104390.3 | Barley | plastid | 44.18 | 27.03 |
| CDX94944 | Canola | nucleus | 31.83 | 26.96 |
| CDY23562 | Canola | nucleus | 39.67 | 26.94 |
| CDY43378 | Canola | nucleus | 39.19 | 26.87 |
| CDY67303 | Canola | nucleus | 32.54 | 26.3 |
| CDX90116 | Canola | nucleus | 32.54 | 26.3 |
| CDX93476 | Canola | nucleus | 31.12 | 26.2 |
| Zm00001d048424_P003 | Maize | plastid | 45.61 | 25.95 |
| CDX88661 | Canola | nucleus | 31.35 | 25.88 |
| CDY58572 | Canola | nucleus | 31.12 | 25.84 |
| CDY02802 | Canola | nucleus | 32.54 | 25.66 |
| Zm00001d018896_P002 | Maize | mitochondrion | 42.99 | 25.64 |
| CDY32718 | Canola | nucleus | 32.07 | 25.52 |
| HORVU4Hr1G072940.4 | Barley | cytosol | 44.66 | 25.34 |
| TraesCS4D01G273200.4 | Wheat | cytosol | 43.23 | 25.17 |
| TraesCS4A01G031600.2 | Wheat | cytosol | 42.99 | 24.83 |
| CDY11758 | Canola | nucleus, plastid | 32.54 | 24.73 |
| TraesCS4B01G274500.2 | Wheat | plastid | 44.66 | 24.51 |
| Zm00001d027731_P012 | Maize | plastid | 45.84 | 24.03 |
| CDY60520 | Canola | cytosol | 7.36 | 23.48 |
| CDX93645 | Canola | nucleus | 31.83 | 21.9 |
| CDY43306 | Canola | cytosol | 31.83 | 21.86 |
Protein Annotations
| EnsemblPlants:CDY07437 | EnsemblPlantsGene:GSBRNA2T00124431001 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF56 | PFAM:PF04146 |
| PFscan:PS50882 | ProteinID:CDY07437 | ProteinID:CDY07437.1 | SEG:seg | UniParc:UPI0004EE24E7 | UniProt:A0A078F2Z3 |
| MapMan:16.5.2.1 | : | : | : | : | : |
Description
BnaA07g25160DBnaA07g25160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F2Z3]
Coordinates
chrLK031978:+:725336..727499
Molecular Weight (calculated)
47660.2 Da
IEP (calculated)
7.463
GRAVY (calculated)
-0.867
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSISPSDQ AADLLQNLSI DQETMAKVTD NTGNNKQDVY GGNSNNGFST KKKLGYSNYS AQKGSYGSYY YPQAYQYPRY GYDMTYPSGK TTNNTPYLGR
101: SGGGYMDSMY SMYGPYSYMS GYGYDTYGYG TYKYTPNWYA FNNGYKTKGY GLYGKENAEW LNELNRGPRA KGFKSGQPET LIDVSVPDSK EYNKEDFSET
201: YYSNAKLFVI KSYSEDDVHK SIKYNVWSST PNGNKKLNAA YNEAKDKSCP VFLIFSVNTS GQFVGLAEMV GPVDFNQTVE YWQQDKWVGC FPVKWHIVKD
301: IPNSSLRHIT LENNENKPVT NSRDTQEVKI EQGVKVIKIF KEHESKTCIL DDFVFYESRE KIIKEGKKKH QEYKKQQALA ASDKKAAPKD EPKETKETSS
401: MIPEVVEEIS QNGVAEVASA C
101: SGGGYMDSMY SMYGPYSYMS GYGYDTYGYG TYKYTPNWYA FNNGYKTKGY GLYGKENAEW LNELNRGPRA KGFKSGQPET LIDVSVPDSK EYNKEDFSET
201: YYSNAKLFVI KSYSEDDVHK SIKYNVWSST PNGNKKLNAA YNEAKDKSCP VFLIFSVNTS GQFVGLAEMV GPVDFNQTVE YWQQDKWVGC FPVKWHIVKD
301: IPNSSLRHIT LENNENKPVT NSRDTQEVKI EQGVKVIKIF KEHESKTCIL DDFVFYESRE KIIKEGKKKH QEYKKQQALA ASDKKAAPKD EPKETKETSS
401: MIPEVVEEIS QNGVAEVASA C
001: MANPDHVSDV LHNLSIDPTT KALAPDSETK LQGAYGGNGN DFLLNDELVE ATKIGKPSLL SKDGGVTKDK GSNLKKLGYQ SAAYNAKGSY GKGAYAYGYY
101: PPAYQYPRHG YTGSYASGKT NLQYQYLTQQ GRSAGNGQSY GGYMDNIYSN YGMCGPYTNG YGYGSYGYDS WKYMPNWYAV NNTYKPRNGY HGYGKENIEG
201: LNEMNRGPRA KGFNSQDGSK VMAVSLKEQR VTETEKLSED VSLLDPKDYN KIDFPETYTE AKFYVIKSYS EDDIHKSIKY SVWSSTPNGN KKLDASYNEA
301: KQKSDGCPVF LLFSVNTSGQ FVGLAEMVGP VDFNKTVEYW QQDKWIGCFP VKWHFVKDIP NSSLRHITLE NNENKPVTNS RDTQEVKLEQ GIKVIKIFKD
401: HASKTCILDD FEFYENRQKI IQERKSKHLQ IKKQTLVANA DKGVMSKINL VKPQESTTAS EDAAALGVAA EVTKESKVVK ETELPVEKNA VATAC
101: PPAYQYPRHG YTGSYASGKT NLQYQYLTQQ GRSAGNGQSY GGYMDNIYSN YGMCGPYTNG YGYGSYGYDS WKYMPNWYAV NNTYKPRNGY HGYGKENIEG
201: LNEMNRGPRA KGFNSQDGSK VMAVSLKEQR VTETEKLSED VSLLDPKDYN KIDFPETYTE AKFYVIKSYS EDDIHKSIKY SVWSSTPNGN KKLDASYNEA
301: KQKSDGCPVF LLFSVNTSGQ FVGLAEMVGP VDFNKTVEYW QQDKWIGCFP VKWHFVKDIP NSSLRHITLE NNENKPVTNS RDTQEVKLEQ GIKVIKIFKD
401: HASKTCILDD FEFYENRQKI IQERKSKHLQ IKKQTLVANA DKGVMSKINL VKPQESTTAS EDAAALGVAA EVTKESKVVK ETELPVEKNA VATAC
Arabidopsis Description
ECT3ECT3 [Source:UniProtKB/TrEMBL;Acc:A0A178UM32]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.