Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034710.1-P | Field mustard | nucleus | 94.69 | 99.16 |
| CDY23562 | Canola | nucleus | 98.71 | 99.03 |
| AT3G13060.2 | Thale cress | nucleus | 89.55 | 87.85 |
| CDY43378 | Canola | nucleus | 85.37 | 86.48 |
| CDY51902 | Canola | cytosol | 21.38 | 85.81 |
| CDY24224 | Canola | nucleus | 84.57 | 85.67 |
| Zm00001d002008_P001 | Maize | cytosol | 9.65 | 82.19 |
| CDY57677 | Canola | mitochondrion | 13.67 | 49.71 |
| Os08t0556000-01 | Rice | nucleus | 48.71 | 48.56 |
| GSMUA_Achr4P12480_001 | Banana | cytosol | 45.18 | 48.36 |
| KXG25412 | Sorghum | cytosol | 48.55 | 47.26 |
| TraesCS1A01G044500.1 | Wheat | nucleus | 47.91 | 46.42 |
| TraesCS1D01G045100.1 | Wheat | nucleus | 47.75 | 46.26 |
| TraesCS1B01G057800.3 | Wheat | nucleus | 47.75 | 46.26 |
| HORVU1Hr1G008330.2 | Barley | nucleus | 47.75 | 46.26 |
| GSMUA_Achr4P11560_001 | Banana | nucleus | 48.07 | 46.07 |
| Zm00001d031981_P002 | Maize | cytosol | 47.75 | 45.62 |
| TraesCS7B01G174500.1 | Wheat | nucleus | 43.41 | 45.08 |
| TraesCS7A01G276800.3 | Wheat | nucleus | 45.18 | 44.96 |
| TraesCS7D01G276800.4 | Wheat | nucleus | 45.02 | 44.8 |
| EES14722 | Sorghum | nucleus | 42.28 | 44.28 |
| Zm00001d049360_P004 | Maize | extracellular | 40.68 | 42.45 |
| Os08t0224200-01 | Rice | mitochondrion | 42.12 | 42.33 |
| Zm00001d024339_P001 | Maize | extracellular | 40.19 | 42.23 |
| TraesCS7B01G182100.2 | Wheat | cytosol | 40.03 | 42.06 |
| TraesCS7A01G291700.1 | Wheat | cytosol | 39.71 | 41.86 |
| HORVU7Hr1G069070.2 | Barley | cytosol | 39.39 | 41.53 |
| GSMUA_Achr1P10560_001 | Banana | nucleus | 29.42 | 41.12 |
| CDX91541 | Canola | mitochondrion | 10.77 | 41.1 |
| CDY50448 | Canola | cytosol | 16.72 | 40.78 |
| CDY29972 | Canola | nucleus | 26.85 | 40.73 |
| CDY07437 | Canola | nucleus | 27.17 | 40.14 |
| CDY21154 | Canola | nucleus | 26.21 | 40.05 |
| Os04t0608800-01 | Rice | nucleus | 36.5 | 39.96 |
| CDY39299 | Canola | nucleus | 27.01 | 39.72 |
| TraesCS7D01G285000.1 | Wheat | endoplasmic reticulum | 38.91 | 39.54 |
| CDY02802 | Canola | nucleus | 33.6 | 39.14 |
| CDY32718 | Canola | nucleus | 33.28 | 39.13 |
| CDY69959 | Canola | nucleus | 24.92 | 38.85 |
| GSMUA_Achr4P04600_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 48.07 | 38.78 |
| CDY50867 | Canola | nucleus | 24.92 | 38.75 |
| CDY42891 | Canola | nucleus | 24.92 | 38.75 |
| CDY58572 | Canola | nucleus | 31.51 | 38.66 |
| CDX88661 | Canola | nucleus | 31.67 | 38.63 |
| Zm00001d008913_P001 | Maize | cytosol, nucleus, peroxisome | 24.6 | 38.35 |
| CDY56132 | Canola | nucleus | 27.17 | 37.81 |
| CDY52966 | Canola | cytosol | 27.01 | 37.5 |
| HORVU7Hr1G058250.46 | Barley | cytosol, plastid | 28.3 | 37.13 |
| CDX87395 | Canola | cytosol | 26.37 | 36.94 |
| CDX88524 | Canola | cytosol | 26.05 | 36.65 |
| KXG27074 | Sorghum | cytosol | 32.48 | 36.59 |
| CDX90116 | Canola | nucleus | 30.55 | 36.47 |
| CDY67303 | Canola | nucleus | 30.55 | 36.47 |
| CDY43989 | Canola | nucleus | 36.33 | 35.65 |
| CDY23602 | Canola | nucleus | 35.69 | 35.58 |
| CDY56809 | Canola | cytosol | 25.56 | 35.49 |
| CDY22270 | Canola | cytosol | 25.56 | 35.49 |
| Zm00001d002372_P002 | Maize | nucleus | 31.19 | 35.14 |
| CDY11758 | Canola | nucleus, plastid | 30.87 | 34.66 |
| CDY24182 | Canola | nucleus | 29.9 | 34.38 |
| CDY07089 | Canola | nucleus | 34.89 | 34.12 |
| CDX75712 | Canola | nucleus | 34.24 | 33.6 |
| CDX82538 | Canola | nucleus | 34.57 | 33.59 |
| CDY05744 | Canola | cytosol | 6.59 | 32.54 |
| CDX68000 | Canola | nucleus | 26.53 | 32.42 |
| CDX79309 | Canola | nucleus | 26.37 | 32.22 |
| Zm00001d047072_P001 | Maize | mitochondrion | 25.08 | 31.9 |
| CDX94944 | Canola | nucleus | 24.28 | 30.38 |
| CDX93476 | Canola | nucleus | 24.12 | 30.0 |
| CDX93645 | Canola | nucleus | 28.62 | 29.09 |
| CDY43306 | Canola | cytosol | 28.62 | 29.04 |
| CDY60520 | Canola | cytosol | 4.5 | 21.21 |
Protein Annotations
| EnsemblPlants:CDY44025 | EnsemblPlantsGene:GSBRNA2T00079431001 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF24 | PFAM:PF04146 |
| PFscan:PS50882 | ProteinID:CDY44025 | ProteinID:CDY44025.1 | SEG:seg | UniParc:UPI0004EEC5AD | UniProt:A0A078HZK8 |
| MapMan:16.5.2.1 | : | : | : | : | : |
Description
BnaA05g26200DBnaA05g26200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZK8]
Coordinates
chrLK032576:-:237387..240986
Molecular Weight (calculated)
68302.4 Da
IEP (calculated)
5.160
GRAVY (calculated)
-0.778
Length
622 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTPPSHAT DLIPSEEQPA NLDIMKEQPV PANNESSQES TVVVHPAKVA PLSGPYGITG DLAGHLPSSI LSPQAQGFYY TGYENPTGEW DDYSSYVNVE
101: GLDITSPVGF NENASLVYQT GYGYNPQMPY GPYSPAASPL PSEGQLYSPY YQQVVPPSMQ YISSPTQPEL TSLVGVDQQG DNMGGPRPSY HPHPIGPFNG
201: NQPNLGFPEW QQGFDGGIWS DWSKPSDMHR HSSHVSPALS PQPLGSFGSY GHNIPMGSQR QRSFYGYGSG SNSYNRGYMH SGGHGQGSNY GSRLISNVSM
301: GNQSWIGVDN IRGRGRVSDP SSLGGGYNGN FDILNEQNRG PRASKPKTQV SSEELDSSAD TKKHNKGSTK EHEDSNNNSN DFVTDYNNAK LFIIKSYSED
401: NVHKSIKYNV WASTANGNKK LDAAYREAKD EKEPCPVFLL FSVNASSQFC GVAEMIGPVD FEKSVDYWQQ DKWSGQFPVK WHIIKDVPNS QFRHIILENN
501: DNKPVTNSRD TQEVKLEQGI EMLKIFKSYD AETSILDDFE FYEEREKIIQ DRKARRQPSL PSGVVESGDK PSSAAALQTD LIKNMSKSFA QVVRLDEGSK
601: ESGKTSSSPD ATTTTVAVSQ SN
101: GLDITSPVGF NENASLVYQT GYGYNPQMPY GPYSPAASPL PSEGQLYSPY YQQVVPPSMQ YISSPTQPEL TSLVGVDQQG DNMGGPRPSY HPHPIGPFNG
201: NQPNLGFPEW QQGFDGGIWS DWSKPSDMHR HSSHVSPALS PQPLGSFGSY GHNIPMGSQR QRSFYGYGSG SNSYNRGYMH SGGHGQGSNY GSRLISNVSM
301: GNQSWIGVDN IRGRGRVSDP SSLGGGYNGN FDILNEQNRG PRASKPKTQV SSEELDSSAD TKKHNKGSTK EHEDSNNNSN DFVTDYNNAK LFIIKSYSED
401: NVHKSIKYNV WASTANGNKK LDAAYREAKD EKEPCPVFLL FSVNASSQFC GVAEMIGPVD FEKSVDYWQQ DKWSGQFPVK WHIIKDVPNS QFRHIILENN
501: DNKPVTNSRD TQEVKLEQGI EMLKIFKSYD AETSILDDFE FYEEREKIIQ DRKARRQPSL PSGVVESGDK PSSAAALQTD LIKNMSKSFA QVVRLDEGSK
601: ESGKTSSSPD ATTTTVAVSQ SN
001: MATTQSHTSD LTSEEQPASL DIMKEQTVPA NNETSASFKS SQEAPVVVHP AKVAPLTGPY GLAGDFAGHL PSSILSPQAQ GFYYRGYENP TGEWDEYSSY
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVKLEQGIE MLKIFKNYDA DTSILDDFGF YEEREKIIQD RKARRQPSLP SAGVVAGENE HKPASAALPT DFMKNMSKSF
601: AQVVRLDEGS KEAVKASSSP DAITTAAVSS GQSN
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVKLEQGIE MLKIFKNYDA DTSILDDFGF YEEREKIIQD RKARRQPSLP SAGVVAGENE HKPASAALPT DFMKNMSKSF
601: AQVVRLDEGS KEAVKASSSP DAITTAAVSS GQSN
Arabidopsis Description
ECT5Evolutionarily conserved C-terminal region 5 [Source:UniProtKB/TrEMBL;Acc:Q0WR25]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.