Factsheet for TraesCS7B01G182100.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G291700.1	Wheat	cytosol	96.45	96.78
HORVU7Hr1G069070.2	Barley	cytosol	93.24	93.56
TraesCS7D01G285000.1	Wheat	endoplasmic reticulum	93.58	90.52
Zm00001d002008_P001	Maize	cytosol	10.81	87.67
EES14722	Sorghum	nucleus	72.8	72.56
Zm00001d049360_P004	Maize	extracellular	71.28	70.81
Zm00001d024339_P001	Maize	extracellular	70.78	70.78
Os08t0224200-01	Rice	mitochondrion	73.31	70.11
CDY51902	Canola	cytosol	14.36	54.84
Zm00001d008913_P001	Maize	cytosol, nucleus, peroxisome	32.77	48.62
TraesCS1B01G057800.3	Wheat	nucleus	45.61	42.06
Bra034710.1-P	Field mustard	nucleus	40.88	40.74
VIT_09s0054g01600.t01	Wine grape	nucleus	45.78	40.69
Bra039366.1-P	Field mustard	nucleus	41.22	40.6
CDY43378	Canola	nucleus	41.89	40.39
AT3G13060.2	Thale cress	nucleus	43.07	40.22
CDY23562	Canola	nucleus	42.06	40.16
CDY24224	Canola	nucleus	41.55	40.07
CDY44025	Canola	nucleus	42.06	40.03
KRH46969	Soybean	endoplasmic reticulum, extracellular	43.75	40.03
Zm00001d047072_P001	Maize	mitochondrion	32.77	39.67
TraesCS7B01G174500.1	Wheat	nucleus	39.86	39.4
KRH44697	Soybean	mitochondrion	43.75	39.36
GSMUA_Achr1P10560_001	Banana	nucleus	27.87	37.08
VIT_01s0010g03690.t01	Wine grape	cytosol	35.3	36.54
Bra006780.1-P	Field mustard	cytosol	29.22	33.99
CDX88661	Canola	nucleus	29.22	33.92
CDY58572	Canola	nucleus	28.89	33.73
Solyc05g032850.2.1	Tomato	nucleus	34.29	33.61
AT5G58190.2	Thale cress	nucleus	29.56	33.14
CDY32718	Canola	nucleus	29.56	33.08
CDY02802	Canola	nucleus	29.39	32.58
Bra020382.1-P	Field mustard	nucleus	29.73	31.83
TraesCS5B01G433000.1	Wheat	cytosol	29.22	29.03
VIT_11s0065g00160.t01	Wine grape	nucleus	35.98	28.98
TraesCS5B01G391500.1	Wheat	nucleus	31.76	28.4
Bra010911.1-P	Field mustard	nucleus	24.66	28.02
CDX90116	Canola	nucleus	24.66	28.02
CDY67303	Canola	nucleus	24.66	28.02
CDY11758	Canola	nucleus, plastid	25.68	27.44
TraesCS5B01G432900.2	Wheat	extracellular	29.9	27.31
AT1G27960.1	Thale cress	cytosol	24.83	27.27
TraesCS3B01G301100.1	Wheat	nucleus	28.38	24.42
TraesCS4B01G274500.2	Wheat	plastid	31.59	24.38
TraesCS4B01G179100.3	Wheat	cytosol, nucleus, plastid	28.72	23.81
TraesCS2B01G010200.1	Wheat	cytosol	25.0	20.73
TraesCS3B01G232300.2	Wheat	cytosol	22.47	19.36
TraesCS1B01G128700.1	Wheat	cytosol	21.96	18.49

Protein Annotations

EnsemblPlants:TraesCS7B01G182100.2	EnsemblPlantsGene:TraesCS7B01G182100	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357	PANTHER:PTHR12357:SF64	PFAM:PF04146
PFscan:PS50882	MapMan:16.5.2.1	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:282329065..282332908

Molecular Weight (calculated)

65551.7 Da

IEP (calculated)

5.657

GRAVY (calculated)

-0.735

Length

592 amino acids

Sequence
(BLAST)

001: MALSGGDPSG FVDCTILLQS EIVVDNSPSK SVNTKEQIIS ITAEKTSATD ARGSTSLKSP EGAHEKANFL GKGGEQPYVY QPNVNVPQPQ TVYSGGYINP
101: SGQWEEYPYY VSMEGLHSAS PSIMLSPGYA NNPQMMYGAY SPVSTVGEGQ SYSPMHFPFS SPYYQPPASL SMGYSNSSTG MSQGDPMLQQ EYFLPDGLLY
201: SPTTVYHQPF ESYNRAATQP SSAPGLFGQG NAPLVSGMQH GSMYNSGSYK ARQQASKYGG TTPNWGSAGR RFNNFDYNSS QQRGSMPFNI QNGALEFLNE
301: QNRGPRAAKP KKQDRDNSLV DDKSEKTTQL IDSELYNCPD FATEYKDAIF FVIKSYTEDH VHRSIKYNVW ASTASGNRKL DSAYRAAKQK EDHCRVFLFF
401: SVNGSGQFCG VAEMIGPVDF DRSVDYWQQD KWSGQFPVKW HIIKDVPNTL LRHITLENND NKPVTNSRDT QEVKLEYGLQ MLSIFKNHEA ETSIVEDFDF
501: YEQREKALKE NRRQQQPGSA ESLKPTDAKA VGNSVTHIAD SFSRSVQLKE IEKSDNKLTA DGAISVNDAQ TATVKAEESN TNKTKGPVEE SS

Best Arabidopsis Sequence Match ( AT3G13060.1 )
(BLAST)

001: MATTQSHTSD LTSEEQPASL DIMKEQTVPA NNETSASFKS SQEAPVVVHP AKVAPLTGPY GLAGDFAGHL PSSILSPQAQ GFYYRGYENP TGEWDEYSSY
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVSSNLCLS SFLVHKIPLL SHTITTTKNY R

Arabidopsis Description

ECT5Evolutionarily conserved C-terminal region 5 [Source:UniProtKB/TrEMBL;Acc:Q0WR25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.