Factsheet for Bra020382.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plasma membrane 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32718	Canola	nucleus	95.12	99.43
Bra006780.1-P	Field mustard	cytosol	72.51	78.78
AT5G58190.2	Thale cress	nucleus	73.42	76.89
Zm00001d002008_P001	Maize	cytosol	9.04	68.49
Solyc05g032850.2.1	Tomato	nucleus	38.34	35.1
GSMUA_Achr1P10560_001	Banana	nucleus	27.85	34.61
Bra034710.1-P	Field mustard	nucleus	36.89	34.34
Bra039366.1-P	Field mustard	nucleus	36.53	33.61
Bra031960.1-P	Field mustard	nucleus	23.69	33.08
Bra004105.1-P	Field mustard	nucleus	23.33	32.58
Bra036423.1-P	Field mustard	nucleus	23.69	32.27
Os08t0556000-01	Rice	nucleus	36.35	32.21
GSMUA_Achr4P12480_001	Banana	cytosol	33.27	31.67
EES14722	Sorghum	nucleus	34.0	31.65
TraesCS1B01G057800.3	Wheat	nucleus	35.99	31.0
TraesCS1A01G044500.1	Wheat	nucleus	35.99	31.0
Zm00001d024339_P001	Maize	extracellular	32.91	30.74
TraesCS1D01G045100.1	Wheat	nucleus	35.62	30.69
GSMUA_Achr4P11560_001	Banana	nucleus	35.99	30.66
HORVU1Hr1G008330.2	Barley	nucleus	35.44	30.53
Zm00001d049360_P004	Maize	extracellular	32.73	30.37
KXG25412	Sorghum	cytosol	34.9	30.2
Bra008406.1-P	Field mustard	cytosol	24.41	30.13
TraesCS7B01G174500.1	Wheat	nucleus	32.55	30.05
Os08t0224200-01	Rice	mitochondrion	33.63	30.05
HORVU7Hr1G069070.2	Barley	cytosol	32.01	30.0
TraesCS7A01G276800.3	Wheat	nucleus	33.82	29.92
TraesCS7D01G276800.4	Wheat	nucleus	33.82	29.92
TraesCS7A01G291700.1	Wheat	cytosol	31.83	29.83
Os04t0608800-01	Rice	nucleus	30.56	29.75
TraesCS7B01G182100.2	Wheat	cytosol	31.83	29.73
Zm00001d008913_P001	Maize	cytosol, nucleus, peroxisome	21.34	29.57
Zm00001d031981_P002	Maize	cytosol	34.72	29.49
VIT_11s0065g00160.t01	Wine grape	nucleus	39.06	29.39
Bra035104.1-P	Field mustard	cytosol	23.51	29.35
Bra008509.1-P	Field mustard	cytosol	21.88	28.61
TraesCS7D01G285000.1	Wheat	endoplasmic reticulum	31.46	28.43
KXG27074	Sorghum	cytosol	28.03	28.08
Zm00001d002372_P002	Maize	nucleus	27.85	27.9
Bra019988.1-P	Field mustard	nucleus	25.14	27.74
Bra003615.1-P	Field mustard	nucleus	25.5	27.7
Bra010911.1-P	Field mustard	nucleus	25.14	26.68
Bra027432.1-P	Field mustard	nucleus	29.48	25.71
Bra018951.1-P	Field mustard	cytosol	11.93	25.48
GSMUA_Achr4P04600_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	35.44	25.42
Zm00001d047072_P001	Maize	mitochondrion	22.42	25.36
Bra001506.1-P	Field mustard	nucleus	29.29	25.35
Bra014253.1-P	Field mustard	cytosol	13.56	25.17
Bra038524.1-P	Field mustard	cytosol	10.13	24.89
HORVU7Hr1G058250.46	Barley	cytosol, plastid	20.98	24.47
Bra039400.1-P	Field mustard	nucleus	28.03	24.37
Bra018708.1-P	Field mustard	nucleus	24.77	22.53

Protein Annotations

EnsemblPlants:Bra020382.1	EnsemblPlants:Bra020382.1-P	EnsemblPlantsGene:Bra020382	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357	PANTHER:PTHR12357:SF56
PFAM:PF04146	PFscan:PS50882	SEG:seg	UniParc:UPI0002543069	UniProt:M4DV39	MapMan:16.5.2.1

Description

AT5G58190 (E=9e-178) ECT10 | ECT10

Coordinates

chrA02:-:6481615..6484364

Molecular Weight (calculated)

61312.1 Da

IEP (calculated)

6.008

GRAVY (calculated)

-0.793

Length

553 amino acids

Sequence
(BLAST)

001: MDPASSRTQP TQIVSPGERP VMADNVGGDH HHQVLSFFDF DFRKAKSHLR FNPFRQQVSP GDERIVSSSS SSSVAPPDPY SYYNLYHPYD WDVAHSGYAQ
101: GFNSWDGYPQ YAAATTTPEG MHVPQVVYDG NSSFMYHQPG FAFNPYQSMM MEGQVPFSPA YYPQYGAPSP MHFAQAEIGG ENSRYDPTSA YMVPFAGYGG
201: GNLSGNQGGN ALASHIPYPQ TMGILGPYDH NASQLPVHGS GVASSSSVGG YYHVGSYQTP NAVGSYYGAD NSGRSAPDIG KRREYSSVPT TNDLYGNRGP
301: RASSRVESKN SSRFSSSAGN SANGSSTAGP NPSLYNNPEF VTDYKNAKFF IVKSFSEDNV HRSIKYNVWA STPHGNKKLD TAYRDAEKMG GKCPIFLFFS
401: VNASGQFCGV SEMVGPVDFE KDAGYWQQDR WSGQFPVKWH ILKDVPNNRF SHILLQNNDN KPVTHSRDSQ EVKLRQGIEM LRIFKEYEAH TSILDDYSYY
501: DERERQKVGE DGGRKEEGEE ETSSSVEQLS ERLQAVTVED GKEGEKEDLK EKT

Best Arabidopsis Sequence Match ( AT5G58190.2 )
(BLAST)

001: MDPASSSSSN QRNRIVSSGE RPVMADNGVQ QQVSHDDGRN IVSSSYSSSV VPSPDPAPYY NVLQTPTNLY HYDWDIANSG YAQGINTWDG YPRYATTTPE
101: AMHVPPVVYN DNSSLMYQYP GYGFNPYPSV MLEGQIPVSP AYYPQPFGAP SAMHYLPSDI DPTSAAYMIP YGQYGGGNYS GNQGDISLTS HIPYPQTMGI
201: LGPYDHNASQ VALHGSGVAS SSSLGGYYHV GSYQNPSSTP SYYGVDNRVR LTPDIGKRRE KDQGSISSTS DLYGNRGPRA SSRVKSKNSS KPCSTIGDSA
301: SDSSTAGPNP SLYNHPEFVT DYKNAKFFIV KSFSEDNVHR SIKYNVWAST PHGNKKLDTA YRDAEKMGGK CPIFLFFSVN ASGQFCGVSE MVGPVDFEKD
401: AGYWQQDRWS GQFPVKWHIV KDIPNNRFCH ILLQNNDNKP VTHSRDSQEV KLRQGIEMLR IFKEYEAHTS ILDDFGYYDE LEGQKVGEDG TRKKAGEEET
501: SVEQLSERLQ AVKVEDGKEE EKKELIAD

Arabidopsis Description

ECT10Evolutionarily conserved C-terminal region 10 [Source:UniProtKB/TrEMBL;Acc:F4KDJ9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.