Factsheet for GSMUA_Achr1P10560_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plasma membrane 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	nucleus
Plant-mPloc:	extracellular, nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002008_P001	Maize	cytosol	12.58	76.71
CDY51902	Canola	cytosol	17.53	50.32
GSMUA_Achr4P14820_001	Banana	cytosol	24.72	33.23
GSMUA_Achr6P12810_001	Banana	nucleus	25.62	32.39
GSMUA_Achr4P12480_001	Banana	cytosol	42.02	32.19
Zm00001d008913_P001	Maize	cytosol, nucleus, peroxisome	27.87	31.08
GSMUA_Achr4P11560_001	Banana	nucleus	44.49	30.51
Bra034710.1-P	Field mustard	nucleus	40.45	30.3
Bra039366.1-P	Field mustard	nucleus	40.45	29.95
CDY23562	Canola	nucleus	41.57	29.84
CDY24224	Canola	nucleus	40.67	29.48
CDY43378	Canola	nucleus	40.67	29.48
CDY44025	Canola	nucleus	41.12	29.42
EES14722	Sorghum	nucleus	39.1	29.29
GSMUA_Achr7P01490_001	Banana	nucleus	36.85	29.29
Os04t0608800-01	Rice	nucleus	37.3	29.23
CDY58572	Canola	nucleus	33.26	29.19
CDY32718	Canola	nucleus	34.61	29.11
Bra006780.1-P	Field mustard	cytosol	33.26	29.08
VIT_01s0010g03690.t01	Wine grape	cytosol	37.3	29.02
KXG27074	Sorghum	cytosol	35.96	28.99
AT3G13060.2	Thale cress	nucleus	41.12	28.86
CDY02802	Canola	nucleus	34.61	28.84
CDX88661	Canola	nucleus	33.03	28.82
Zm00001d049360_P004	Maize	extracellular	38.43	28.69
Zm00001d002372_P002	Maize	nucleus	35.28	28.44
HORVU7Hr1G069070.2	Barley	cytosol	37.53	28.31
Os08t0224200-01	Rice	mitochondrion	39.33	28.27
Zm00001d024339_P001	Maize	extracellular	37.3	28.04
TraesCS7A01G291700.1	Wheat	cytosol	37.08	27.97
TraesCS7B01G182100.2	Wheat	cytosol	37.08	27.87
Bra020382.1-P	Field mustard	nucleus	34.61	27.85
AT5G58190.2	Thale cress	nucleus	33.03	27.84
KRH46969	Soybean	endoplasmic reticulum, extracellular	40.45	27.82
VIT_09s0054g01600.t01	Wine grape	nucleus	41.35	27.63
KRH44697	Soybean	mitochondrion	40.22	27.2
CDY67303	Canola	nucleus	31.24	26.68
CDX90116	Canola	nucleus	31.24	26.68
TraesCS7D01G285000.1	Wheat	endoplasmic reticulum	36.63	26.63
Bra010911.1-P	Field mustard	nucleus	31.01	26.49
AT1G27960.1	Thale cress	cytosol	31.69	26.16
GSMUA_Achr4P22630_001	Banana	nucleus	36.4	26.09
GSMUA_Achr4P04600_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	44.72	25.81
Zm00001d047072_P001	Maize	mitochondrion	28.31	25.77
GSMUA_Achr7P27220_001	Banana	cytosol	37.98	25.57
GSMUA_Achr4P21380_001	Banana	nucleus	37.53	25.38
GSMUA_Achr4P28430_001	Banana	nucleus, plastid	35.06	25.37
CDY11758	Canola	nucleus, plastid	31.46	25.27
GSMUA_Achr6P26690_001	Banana	cytosol	34.38	25.12
Solyc05g032850.2.1	Tomato	nucleus	33.48	24.67
GSMUA_Achr5P02830_001	Banana	cytosol	33.71	24.35
GSMUA_Achr9P06180_001	Banana	endoplasmic reticulum, plasma membrane	33.48	24.07
VIT_11s0065g00160.t01	Wine grape	nucleus	37.98	22.99
GSMUA_Achr1P24980_001	Banana	nucleus	33.93	18.19
GSMUA_Achr8P29890_001	Banana	cytosol	31.01	17.02

Protein Annotations

EnsemblPlants:GSMUA_Achr1P10560_001	EnsemblPlants:GSMUA_Achr1T10560_001	EnsemblPlantsGene:GSMUA_Achr1G10560_001	Gene3D:3.10.590.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	PANTHER:PTHR12357	PANTHER:PTHR12357:SF56
PFAM:PF04146	PFscan:PS50882	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI000296ECF8	UniProt:M0RYR5
MapMan:16.5.2.1	:	:	:	:	:

Description

ECT5, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G10560_001]

Coordinates

chr1:-:7965674..7971117

Molecular Weight (calculated)

49154.0 Da

IEP (calculated)

9.143

GRAVY (calculated)

-0.604

Length

445 amino acids

Sequence
(BLAST)

001: MPFLLLFHFS SSWNEGTEGA DAVGNVGASF PANMDNSQAQ SFYYGGYGNP SGTFVTYTQH VGIEGTNAVG NVSGTDTQHV GIEGAIAVGN VGASYPISMY
101: NPQAQMSGSA AAYSEEHPLV FNAGNGYGQY MPNGPYYPSA MPAYVGGNVQ GVSYPSTENN NTIRERGNAS FGRSNGTHGF LRRQSRRPWT NRSNNRAIQQ
201: HSVAESGGAN CSLGVDRKLY NSPEFVTEYD DGKIFIIKSY SEANVHKSIK YGVWSSTSAG NKKLNSAYIE AQKKGHSSPI FLFFSVNASG RFCGVAEMIG
301: PVDFEKSVDY WNKDKWTGQF PVKWHIVKDV PSFRFRHIIL ENNDNKPVTN SRDTQEVKLE QGLEMLSIFK THEYKESILD AFEFYDKREA ALRRRKARQQ
401: ETRTTTRNRI SKRFVQVVKF KGETSNVGIS TDKTSSSNGV AAEEA

Best Arabidopsis Sequence Match ( AT5G58190.2 )
(BLAST)

001: MDPASSSSSN QRNRIVSSGE RPVMADNGVQ QQVSHDDGRN IVSSSYSSSV VPSPDPAPYY NVLQTPTNLY HYDWDIANSG YAQGINTWDG YPRYATTTPE
101: AMHVPPVVYN DNSSLMYQYP GYGFNPYPSV MLEGQIPVSP AYYPQPFGAP SAMHYLPSDI DPTSAAYMIP YGQYGGGNYS GNQGDISLTS HIPYPQTMGI
201: LGPYDHNASQ VALHGSGVAS SSSLGGYYHV GSYQNPSSTP SYYGVDNRVR LTPDIGKRRE KDQGSISSTS DLYGNRGPRA SSRVKSKNSS KPCSTIGDSA
301: SDSSTAGPNP SLYNHPEFVT DYKNAKFFIV KSFSEDNVHR SIKYNVWAST PHGNKKLDTA YRDAEKMGGK CPIFLFFSVN ASGQFCGVSE MVGPVDFEKD
401: AGYWQQDRWS GQFPVKWHIV KDIPNNRFCH ILLQNNDNKP VTHSRDSQEV KLRQGIEMLR IFKEYEAHTS ILDDFGYYDE LEGQKVGEDG TRKKAGEEET
501: SVEQLSERLQ AVKVEDGKEE EKKELIAD

Arabidopsis Description

ECT10Evolutionarily conserved C-terminal region 10 [Source:UniProtKB/TrEMBL;Acc:F4KDJ9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.