Factsheet for Zm00001d024339_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002008_P001	Maize	cytosol	11.49	93.15
EES14722	Sorghum	nucleus	91.72	91.41
Zm00001d049360_P004	Maize	extracellular	88.34	87.75
Os08t0224200-01	Rice	mitochondrion	76.69	73.34
TraesCS7A01G291700.1	Wheat	cytosol	71.28	71.53
HORVU7Hr1G069070.2	Barley	cytosol	70.61	70.85
TraesCS7B01G182100.2	Wheat	cytosol	70.78	70.78
TraesCS7D01G285000.1	Wheat	endoplasmic reticulum	68.75	66.5
Zm00001d008913_P001	Maize	cytosol, nucleus, peroxisome	38.68	57.39
CDY51902	Canola	cytosol	14.02	53.55
Zm00001d047072_P001	Maize	mitochondrion	38.68	46.83
Zm00001d002372_P002	Maize	nucleus	41.55	44.57
VIT_09s0054g01600.t01	Wine grape	nucleus	46.11	40.99
Zm00001d031981_P002	Maize	cytosol	44.76	40.71
Bra034710.1-P	Field mustard	nucleus	40.71	40.57
KRH46969	Soybean	endoplasmic reticulum, extracellular	44.26	40.49
CDY24224	Canola	nucleus	41.89	40.39
CDY23562	Canola	nucleus	42.23	40.32
Bra039366.1-P	Field mustard	nucleus	40.88	40.27
CDY43378	Canola	nucleus	41.72	40.23
CDY44025	Canola	nucleus	42.23	40.19
KRH44697	Soybean	mitochondrion	44.59	40.12
AT3G13060.2	Thale cress	nucleus	42.74	39.91
VIT_01s0010g03690.t01	Wine grape	cytosol	37.67	38.99
GSMUA_Achr1P10560_001	Banana	nucleus	28.04	37.3
Bra006780.1-P	Field mustard	cytosol	30.41	35.36
AT5G58190.2	Thale cress	nucleus	31.42	35.23
CDX88661	Canola	nucleus	30.07	34.9
Solyc05g032850.2.1	Tomato	nucleus	35.14	34.44
CDY32718	Canola	nucleus	30.57	34.22
CDY58572	Canola	nucleus	29.22	34.12
CDY02802	Canola	nucleus	30.57	33.9
Bra020382.1-P	Field mustard	nucleus	30.74	32.91
VIT_11s0065g00160.t01	Wine grape	nucleus	38.51	31.02
Zm00001d034005_P003	Maize	plasma membrane	33.45	30.0
AT1G27960.1	Thale cress	cytosol	26.18	28.76
CDY67303	Canola	nucleus	25.0	28.41
Bra010911.1-P	Field mustard	nucleus	25.0	28.41
CDX90116	Canola	nucleus	25.0	28.41
CDY11758	Canola	nucleus, plastid	26.01	27.8
Zm00001d011602_P001	Maize	nucleus	28.04	27.26
Zm00001d048424_P003	Maize	plastid	33.28	26.62
Zm00001d007890_P002	Maize	mitochondrion	29.05	26.34
Zm00001d018896_P002	Maize	mitochondrion	29.22	24.5
Zm00001d038120_P001	Maize	cytosol	9.63	24.46
Zm00001d043860_P001	Maize	mitochondrion	27.53	24.15
Zm00001d027731_P012	Maize	plastid	32.26	23.79
Zm00001d032562_P001	Maize	cytosol	10.64	22.74
Zm00001d051781_P001	Maize	cytosol, extracellular	9.63	22.71
Zm00001d034996_P005	Maize	cytosol	23.14	19.91
Zm00001d048501_P002	Maize	cytosol	24.83	19.39
Zm00001d010826_P001	Maize	cytosol	13.01	18.6
Zm00001d049729_P008	Maize	cytosol	22.47	18.47

Protein Annotations

EntrezGene:100192484	MapMan:16.5.2.1	Gene3D:3.10.590.10	ProteinID:AQK41053.1	UniProt:B4FBI4	EMBL:BT034472
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	PFAM:PF04146
PFscan:PS50882	PANTHER:PTHR12357	PANTHER:PTHR12357:SF64	UniParc:UPI00017B68CB	InterPro:YTH_domain	EnsemblPlantsGene:Zm00001d024339
EnsemblPlants:Zm00001d024339_P001	EnsemblPlants:Zm00001d024339_T001	SEG:seg	:	:	:

Description

evolutionarily conserved C-terminal region 10

Coordinates

chr10:-:65524284..65532891

Molecular Weight (calculated)

64831.0 Da

IEP (calculated)

6.093

GRAVY (calculated)

-0.753

Length

592 amino acids

Sequence
(BLAST)

001: MAAAPHQAQG PADSVIPLQS EPALDNNPSK SANARDQILS GTENVTTGNA RGGSSLKSQK GPPEKASSVG KPGEQPFPYH QNVYAPQPQP LYPGGYMNPS
101: GQWEEYPHYV SMEGLHSVSP GIYNDNQSLM LSPGYANNPQ MMYGAYSPVS TVGDGQQYLP MHFPFSSPYY QPPASPSMGY SSSATGISQG DPMLQQEYFL
201: PDGLLYSPTQ GYHQPFSSFD RAPTQLNNAP GLFGQGNLPL ASGMHHGSMY GPGSYKGRQQ GSKFGGSTTS WSSAGRRFGT IDLSGNQQRG SMPFGSHNGS
301: LEFMNEQNRG PRATKPKIQG TENTSGDERS EKIVPLIDSE LYNRSDFITE YKDAKFFVIK SYTEDHVHRS IKYKVWASTA SGNRKLDSAY HAAKEKEEHC
401: PIFLFFSVNG SGQFCGVAEM IGPVDFDRSV DYWQQDKWSG QFPVKWHIIK DVPNNLLRHI ILENNDSKPV TNSRDTQEVK LEQGLQMLTI FKNHEAETTI
501: VEDFDFYEQR EKALQENRRQ QQPPTTYPQK LVDTNAQGPV ADISDAFAKA VQLKDTANSG TTPKAEGASA ENGSAATAKV EGSANLNTGP VE

Best Arabidopsis Sequence Match ( AT3G13060.1 )
(BLAST)

001: MATTQSHTSD LTSEEQPASL DIMKEQTVPA NNETSASFKS SQEAPVVVHP AKVAPLTGPY GLAGDFAGHL PSSILSPQAQ GFYYRGYENP TGEWDEYSSY
101: VNVEGLDITS PVGFNENASL VYQTGYGYNP QMPYGPYSPA ASPLPSEGQL YSPQQFPFSG ASPYYQQVVP PSMQYITSPT QPELTSLVGV DQQGDNIGPR
201: QSYHPHPIGP FNGNQPNLGF PEWQQGFDGG IWSDWSKPSD MHRHSSSISP ALSPQPLGSY GSYGQNIPMG SQRQRSFYGF GSGSNSYNRG YMHSGGRGQG
301: SNYGSRLISN VGMGNQGWIG VDNSRGRGRV SDPSLGGAYN GTFDILNEQN RGPRASKPKT QVLEELDSAA DSKKNNKGSA KEHEESNNAD FVTDYTNAKL
401: FIIKSYSEDN VHKSIKYNVW ASTPNGNKKL DAAYREAKDE KEPCPLFLLF SVNASSQFCG VAEMVGPVDF EKSVDYWQQD KWSGQFPVKW HIIKDVPNSQ
501: FRHIILENND NKPVTNSRDT QEVSSNLCLS SFLVHKIPLL SHTITTTKNY R

Arabidopsis Description

ECT5Evolutionarily conserved C-terminal region 5 [Source:UniProtKB/TrEMBL;Acc:Q0WR25]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.