Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67303 | Canola | nucleus | 100.0 | 100.0 |
| Bra010911.1-P | Field mustard | nucleus | 99.62 | 99.62 |
| CDY11758 | Canola | nucleus, plastid | 90.59 | 85.2 |
| Zm00001d002008_P001 | Maize | cytosol | 9.79 | 69.86 |
| AT1G27960.1 | Thale cress | cytosol | 68.33 | 66.05 |
| CDY51902 | Canola | cytosol | 14.97 | 50.32 |
| CDY57677 | Canola | mitochondrion | 14.4 | 43.86 |
| CDY50448 | Canola | cytosol | 16.7 | 34.12 |
| CDY42891 | Canola | nucleus | 26.1 | 34.0 |
| CDY50867 | Canola | nucleus | 26.1 | 34.0 |
| CDY69959 | Canola | nucleus | 25.91 | 33.83 |
| CDX91541 | Canola | mitochondrion | 10.56 | 33.74 |
| CDY21154 | Canola | nucleus | 25.72 | 32.92 |
| CDY39299 | Canola | nucleus | 26.49 | 32.62 |
| CDY07437 | Canola | nucleus | 26.3 | 32.54 |
| CDY05744 | Canola | cytosol | 7.87 | 32.54 |
| CDY29972 | Canola | nucleus | 25.14 | 31.95 |
| GSMUA_Achr1P10560_001 | Banana | nucleus | 26.68 | 31.24 |
| CDY56132 | Canola | nucleus | 26.3 | 30.65 |
| CDY23562 | Canola | nucleus | 36.47 | 30.65 |
| VIT_01s0010g03690.t01 | Wine grape | cytosol | 33.59 | 30.59 |
| CDY52966 | Canola | cytosol | 26.3 | 30.58 |
| CDY44025 | Canola | nucleus | 36.47 | 30.55 |
| GSMUA_Achr4P12480_001 | Banana | cytosol | 33.97 | 30.46 |
| CDX88524 | Canola | cytosol | 25.53 | 30.09 |
| CDY24224 | Canola | nucleus | 35.32 | 29.97 |
| CDX87395 | Canola | cytosol | 25.34 | 29.73 |
| CDY43378 | Canola | nucleus | 34.93 | 29.64 |
| Os08t0556000-01 | Rice | nucleus | 35.12 | 29.33 |
| Zm00001d008913_P001 | Maize | cytosol, nucleus, peroxisome | 22.26 | 29.07 |
| CDY22270 | Canola | cytosol | 24.76 | 28.79 |
| CDY56809 | Canola | cytosol | 24.76 | 28.79 |
| GSMUA_Achr4P11560_001 | Banana | nucleus | 35.51 | 28.51 |
| KXG25412 | Sorghum | cytosol | 34.36 | 28.01 |
| TraesCS7B01G174500.1 | Wheat | nucleus | 31.67 | 27.55 |
| TraesCS7A01G276800.3 | Wheat | nucleus | 32.82 | 27.36 |
| TraesCS7D01G276800.4 | Wheat | nucleus | 32.82 | 27.36 |
| TraesCS1A01G044500.1 | Wheat | nucleus | 33.59 | 27.26 |
| TraesCS1B01G057800.3 | Wheat | nucleus | 33.59 | 27.26 |
| TraesCS1D01G045100.1 | Wheat | nucleus | 33.59 | 27.26 |
| HORVU1Hr1G008330.2 | Barley | nucleus | 33.4 | 27.1 |
| CDX79309 | Canola | nucleus | 26.3 | 26.92 |
| CDY02802 | Canola | nucleus | 27.45 | 26.78 |
| Zm00001d031981_P002 | Maize | cytosol | 33.21 | 26.57 |
| CDX68000 | Canola | nucleus | 25.91 | 26.52 |
| CDY32718 | Canola | nucleus | 26.87 | 26.46 |
| KXG27074 | Sorghum | cytosol | 28.02 | 26.45 |
| CDY23602 | Canola | nucleus | 31.48 | 26.28 |
| Os04t0608800-01 | Rice | nucleus | 28.6 | 26.23 |
| EES14722 | Sorghum | nucleus | 29.56 | 25.93 |
| Zm00001d002372_P002 | Maize | nucleus | 27.45 | 25.91 |
| CDY43989 | Canola | nucleus | 31.29 | 25.71 |
| CDY24182 | Canola | nucleus | 26.68 | 25.69 |
| CDY58572 | Canola | nucleus | 24.76 | 25.44 |
| CDX75712 | Canola | nucleus | 30.9 | 25.39 |
| Zm00001d049360_P004 | Maize | extracellular | 28.98 | 25.34 |
| CDX82538 | Canola | nucleus | 31.09 | 25.31 |
| Zm00001d024339_P001 | Maize | extracellular | 28.41 | 25.0 |
| CDX94944 | Canola | nucleus | 23.8 | 24.95 |
| CDX88661 | Canola | nucleus | 24.38 | 24.9 |
| CDY07089 | Canola | nucleus | 30.13 | 24.69 |
| TraesCS7B01G182100.2 | Wheat | cytosol | 28.02 | 24.66 |
| CDX93476 | Canola | nucleus | 23.61 | 24.6 |
| TraesCS7A01G291700.1 | Wheat | cytosol | 27.64 | 24.41 |
| Os08t0224200-01 | Rice | mitochondrion | 28.98 | 24.39 |
| HORVU7Hr1G058250.46 | Barley | cytosol, plastid | 21.88 | 24.05 |
| TraesCS7D01G285000.1 | Wheat | endoplasmic reticulum | 28.21 | 24.02 |
| HORVU7Hr1G069070.2 | Barley | cytosol | 27.06 | 23.9 |
| GSMUA_Achr4P04600_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 35.12 | 23.74 |
| Zm00001d047072_P001 | Maize | mitochondrion | 22.26 | 23.72 |
| CDY43306 | Canola | cytosol | 27.83 | 23.65 |
| CDX93645 | Canola | nucleus | 27.26 | 23.2 |
| CDY60520 | Canola | cytosol | 4.99 | 19.7 |
Protein Annotations
| EnsemblPlants:CDX90116 | EnsemblPlantsGene:GSBRNA2T00150634001 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF56 | PFAM:PF04146 |
| PFscan:PS50882 | ProteinID:CDX90116 | ProteinID:CDX90116.1 | ProteinID:CDY67303.1 | SEG:seg | UniParc:UPI0004EEECD4 |
| UniProt:A0A078DLG8 | MapMan:16.5.2.1 | : | : | : | : |
Description
BnaA08g18680DBnaA08g18680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078DLG8]
Coordinates
chrLK031862:-:167073..169848
Molecular Weight (calculated)
59384.0 Da
IEP (calculated)
6.510
GRAVY (calculated)
-0.660
Length
521 amino acids
Sequence
(BLAST)
(BLAST)
001: MVERLSTDKS VLQHQDTNSF RPFCGSGYPF SPSSCGINTD SFHVGGYEHA VDTPSSYRSS TDTLSFEEVY HGMRYDDMFY HGNGVPSLPQ HYGDLHADDV
101: NYFAPFRSSN QQYPLPEPLH ASPEFHMSQT NSTHPYRHGN EINSFETDYM MRSTRNFGLR NNIFGKPKLN PFTGRRTFLP MASTTRSMKH PISADLSAND
201: FDMGSPSRFL QDDFGSSASL TYREQAYNQC KRGSFSASSS SPSSPWELDY IFPPLDESTS GSCSDFYHRP AMSDLLTERN RGPRASRPNA KSKMITYDQQ
301: DLLSQFRDAK FFVIKSYSED NVYKSMKYCV WASTKNGNKK LDAAYREAKT KEVACPVFLL FSVNASAQFC GVAEMVGPVD FETSVEYWQQ DRWSGHFPVK
401: WVIVKDVPNS LFRHIIIEDN DNKPVTNSRD TQEVGVEQGI EMINIFNSCE MKSSILDDFS FYEERQRIQD RKARQRALLE PLRASSLTSV PTHLASSLHE
501: DYVREMSKSF ADALVLQHKL N
101: NYFAPFRSSN QQYPLPEPLH ASPEFHMSQT NSTHPYRHGN EINSFETDYM MRSTRNFGLR NNIFGKPKLN PFTGRRTFLP MASTTRSMKH PISADLSAND
201: FDMGSPSRFL QDDFGSSASL TYREQAYNQC KRGSFSASSS SPSSPWELDY IFPPLDESTS GSCSDFYHRP AMSDLLTERN RGPRASRPNA KSKMITYDQQ
301: DLLSQFRDAK FFVIKSYSED NVYKSMKYCV WASTKNGNKK LDAAYREAKT KEVACPVFLL FSVNASAQFC GVAEMVGPVD FETSVEYWQQ DRWSGHFPVK
401: WVIVKDVPNS LFRHIIIEDN DNKPVTNSRD TQEVGVEQGI EMINIFNSCE MKSSILDDFS FYEERQRIQD RKARQRALLE PLRASSLTSV PTHLASSLHE
501: DYVREMSKSF ADALVLQHKL N
001: MAASYRSTDW FPPTTTTGSF TGLNTDQSVL QDQDIVSSRP FCGQGTESFH IGADTPRSNH SHSDVPSFDK VSPGMINEMF YHSNGVPSDF QRSSLSTRNQ
101: SSLQHYGDLY ADDSRYFVPF HLSNQQYPTP EDIHLSPEFH MFQANSRHFD RHVNERNSSE IDNMMRARGN SVLRDNIYGE PRGMNLNPFS GENMFPPLAS
201: TRPCMRHLGS AELLANDFNM GPAHGGLHDA FESAANLSYR EQAYAQCKRS PFSASSSSPT WENDYNLPPL DEARSESYND FSHCPAMLDM LTESNRGPRA
301: SRLNSKSKMI SYDRVDRFCQ QELLSQFRDA KFFVIKSYSE DNVHKSIKHC VWASTKNGNK KLDAAYREAK KKDVACPVFL LFSVNASSQF CGVAEMVGPV
401: DFNTSVEYWQ QDRWSGHFPV QWLIVKDVPN SLFRHIIIES NDNKPVTNSR DTQEVGLEKG IEMLDIFISC EMRSSILDDF NFYEERQIAI QDRKARQRAV
501: LESLALSATS APTYSLHDDF VREMSKHFAE ALALQHRPK
101: SSLQHYGDLY ADDSRYFVPF HLSNQQYPTP EDIHLSPEFH MFQANSRHFD RHVNERNSSE IDNMMRARGN SVLRDNIYGE PRGMNLNPFS GENMFPPLAS
201: TRPCMRHLGS AELLANDFNM GPAHGGLHDA FESAANLSYR EQAYAQCKRS PFSASSSSPT WENDYNLPPL DEARSESYND FSHCPAMLDM LTESNRGPRA
301: SRLNSKSKMI SYDRVDRFCQ QELLSQFRDA KFFVIKSYSE DNVHKSIKHC VWASTKNGNK KLDAAYREAK KKDVACPVFL LFSVNASSQF CGVAEMVGPV
401: DFNTSVEYWQ QDRWSGHFPV QWLIVKDVPN SLFRHIIIES NDNKPVTNSR DTQEVGLEKG IEMLDIFISC EMRSSILDDF NFYEERQIAI QDRKARQRAV
501: LESLALSATS APTYSLHDDF VREMSKHFAE ALALQHRPK
Arabidopsis Description
ECT9At1g27960 [Source:UniProtKB/TrEMBL;Acc:Q500V8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.