Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010826_P001 | Maize | cytosol | 46.75 | 79.95 |
| TraesCS1B01G128700.1 | Wheat | cytosol | 50.0 | 50.36 |
| TraesCS1A01G105700.1 | Wheat | cytosol | 49.44 | 49.86 |
| TraesCS1D01G109300.1 | Wheat | cytosol | 49.44 | 49.58 |
| KXG24185 | Sorghum | nucleus | 35.88 | 34.65 |
| KRH36908 | Soybean | cytosol | 19.07 | 30.41 |
| Bra018708.1-P | Field mustard | nucleus | 22.32 | 25.99 |
| CDX93645 | Canola | nucleus | 22.32 | 25.82 |
| CDY43306 | Canola | cytosol | 22.32 | 25.77 |
| AT3G17330.1 | Thale cress | nucleus | 20.9 | 24.87 |
| AT1G48110.2 | Thale cress | nucleus | 21.75 | 24.1 |
| Solyc12g099090.1.1 | Tomato | cytosol | 22.32 | 22.9 |
| PGSC0003DMT400011739 | Potato | cytosol | 22.18 | 22.46 |
| VIT_05s0020g00460.t01 | Wine grape | cytosol | 22.6 | 22.41 |
| KXG25412 | Sorghum | cytosol | 19.63 | 21.75 |
| EES14722 | Sorghum | nucleus | 18.22 | 21.72 |
| KRH02430 | Soybean | cytosol | 21.19 | 21.61 |
| KXG27074 | Sorghum | cytosol | 16.81 | 21.56 |
| KRH11876 | Soybean | endoplasmic reticulum | 21.33 | 21.54 |
| KRH50636 | Soybean | cytosol | 21.05 | 21.44 |
| KXG40139 | Sorghum | plastid | 20.48 | 20.39 |
| EER93461 | Sorghum | nucleus | 18.93 | 20.33 |
| OQU87332 | Sorghum | mitochondrion, nucleus | 19.21 | 20.27 |
| KXG34475 | Sorghum | cytosol | 18.08 | 19.81 |
| EER93313 | Sorghum | cytosol | 15.82 | 19.58 |
| KXG21015 | Sorghum | nucleus | 16.95 | 18.38 |
Protein Annotations
| EnsemblPlants:OQU77486 | EnsemblPlantsGene:SORBI_3009G054400 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | ncoils:Coil | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF26 |
| PFAM:PF04146 | PFscan:PS50882 | ProteinID:OQU77486 | ProteinID:OQU77486.1 | SEG:seg | UniParc:UPI000B8BB1BF |
| UniProt:A0A1Z5R299 | MapMan:16.5.2.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:5515394..5518873
Molecular Weight (calculated)
78794.7 Da
IEP (calculated)
8.786
GRAVY (calculated)
-0.599
Length
708 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLPEHHDLI FGEEFCFPAT TTYYPPLYAP TGINVPTQLY QQQTSSRCDN QAQSYMGHKV QGTSSMYYVV PNYGIEHSPH GSHPLHPCAI GDGRFVRTQE
101: YHAETVEHTY HQPIPMPYCS AHPSAADRTP ASTAQSLGYT NGLFVPGGLR QTVSVTSERG VAWNQSLQQA TIASMEFQSH TSLPKEQPRR PAPWKRQLSG
201: GARAPARLPV PRARRAPHQS PQAAAPSARS SLQANLSYNN EASNVGSDLC GMQSTERSQP YARTSSYANR RFSSMSQQNT SKAKKPIGSM PPEITVKSYT
301: SRLLIGNPEG KIVIRSDHYN RHDFQVVYPN AKFFVIKSYD EADIHKSIKY GVWSTSSIGS QKLDFAFREA QAIAASSSTL CPVFLFFSQV NASYNFCGVA
401: EMVGPVDYQN DMDFWCMDKW IGSFPVKWHI IKNVHNSTFR SILLQNNEDK PVTSSRDTQE IHYTPGTTML ELFKYTRADG CVLDSFMVHE EKEARRLQKF
501: KLRRSAPHFI PAWHGPRPSR HVLPKSECVV MDKITSETNN LTDKLQSLNL EKNQASWQDF GNLTSIASTT NRQKEWYCYG TQAHGKTNKN TAKAIPSPAR
601: AYHPMTPTIK KYALDGEQRC WKKVQIAPTE NPHPETVAIA SSKAPPEEHQ QGGENTLAHS LSGDQCEEQK IVGKACPPAP VSTSKACSEP LPGMLAIGSM
701: LVPITTSS
101: YHAETVEHTY HQPIPMPYCS AHPSAADRTP ASTAQSLGYT NGLFVPGGLR QTVSVTSERG VAWNQSLQQA TIASMEFQSH TSLPKEQPRR PAPWKRQLSG
201: GARAPARLPV PRARRAPHQS PQAAAPSARS SLQANLSYNN EASNVGSDLC GMQSTERSQP YARTSSYANR RFSSMSQQNT SKAKKPIGSM PPEITVKSYT
301: SRLLIGNPEG KIVIRSDHYN RHDFQVVYPN AKFFVIKSYD EADIHKSIKY GVWSTSSIGS QKLDFAFREA QAIAASSSTL CPVFLFFSQV NASYNFCGVA
401: EMVGPVDYQN DMDFWCMDKW IGSFPVKWHI IKNVHNSTFR SILLQNNEDK PVTSSRDTQE IHYTPGTTML ELFKYTRADG CVLDSFMVHE EKEARRLQKF
501: KLRRSAPHFI PAWHGPRPSR HVLPKSECVV MDKITSETNN LTDKLQSLNL EKNQASWQDF GNLTSIASTT NRQKEWYCYG TQAHGKTNKN TAKAIPSPAR
601: AYHPMTPTIK KYALDGEQRC WKKVQIAPTE NPHPETVAIA SSKAPPEEHQ QGGENTLAHS LSGDQCEEQK IVGKACPPAP VSTSKACSEP LPGMLAIGSM
701: LVPITTSS
001: MYTSEAAPDF VVDQGMYYPV DASYGYYCTG YESPGDWENH QMFFGVDGSE VQYTGGQNEN SPYICYTPSY GYAQSPYNPF NPYIPGASIG VDSAFVAPQQ
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK
Arabidopsis Description
ECT7evolutionarily conserved C-terminal region 7 [Source:TAIR;Acc:AT1G48110]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.