CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 4
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36908	Soybean	cytosol	57.92	91.44
KRH02430	Soybean	cytosol	66.76	67.44
KRH50636	Soybean	cytosol	66.48	67.05
VIT_05s0020g00460.t01	Wine grape	cytosol	56.35	55.32
KRH26322	Soybean	cytosol	9.7	53.12
PGSC0003DMT400011739	Potato	cytosol	47.93	48.07
Solyc12g099090.1.1	Tomato	cytosol	46.79	47.54
Bra018708.1-P	Field mustard	nucleus	38.66	44.57
CDX93645	Canola	nucleus	38.8	44.44
AT1G48110.2	Thale cress	nucleus	40.09	43.98
AT3G17330.1	Thale cress	nucleus	37.23	43.87
CDY43306	Canola	cytosol	38.09	43.56
GSMUA_Achr8P29890_001	Banana	cytosol	35.95	31.07
KRH43645	Soybean	nucleus	25.54	30.92
Os03t0317000-01	Rice	plasma membrane	31.24	30.89
KRH13810	Soybean	nucleus, plastid	25.25	30.68
KRH46969	Soybean	endoplasmic reticulum, extracellular	27.96	30.29
GSMUA_Achr1P24980_001	Banana	nucleus	35.24	29.76
KRH44697	Soybean	mitochondrion	27.82	29.64
TraesCS4D01G180500.5	Wheat	cytosol, nucleus, plastid	29.96	29.45
TraesCS4B01G179100.3	Wheat	cytosol, nucleus, plastid	29.81	29.27
TraesCS4A01G125600.3	Wheat	cytosol, nucleus, plastid	29.81	29.07
KRH43005	Soybean	nucleus	28.82	28.57
KRH59123	Soybean	nucleus	28.82	28.53
KRH70155	Soybean	nucleus	25.39	28.25
KRH06073	Soybean	cytosol, nucleus, peroxisome	19.83	28.02
KRG94807	Soybean	nucleus	25.82	27.47
HORVU4Hr1G052390.3	Barley	golgi	29.24	27.33
KRH06717	Soybean	nucleus	25.54	27.0
Os01t0329800-01	Rice	cytosol	25.39	25.14
TraesCS3B01G232300.2	Wheat	cytosol	24.11	24.6
Zm00001d034996_P005	Maize	cytosol	24.11	24.56
TraesCS3A01G199100.2	Wheat	cytosol	24.11	24.53
HORVU3Hr1G045890.2	Barley	endoplasmic reticulum, peroxisome, plasma membrane	22.68	24.31
TraesCS3D01G199400.2	Wheat	cytosol	23.82	24.27
Zm00001d010826_P001	Maize	cytosol	14.27	24.15
KXG24185	Sorghum	nucleus	25.25	24.15
Zm00001d049729_P008	Maize	cytosol	24.68	24.03
TraesCS1B01G128700.1	Wheat	cytosol	23.97	23.9
TraesCS1A01G105700.1	Wheat	cytosol	23.82	23.79
TraesCS1D01G109300.1	Wheat	cytosol	23.82	23.65
OQU77486	Sorghum	cytosol	21.54	21.33

Protein Annotations

EMBL:ACUP02009243	EnsemblPlants:KRH11876	EnsemblPlantsGene:GLYMA_15G136400	EntrezGene:100784464	Gene3D:3.10.590.10	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR007275	InterPro:YTH_domain	ncoils:Coil
PANTHER:PTHR12357	PANTHER:PTHR12357:SF22	PFAM:PF04146	PFscan:PS50882	ProteinID:KRH11876	ProteinID:KRH11876.1
SEG:seg	UniParc:UPI0006EE143E	UniProt:A0A0R0GBC3	MapMan:16.5.2.1	:	:

Description

hypothetical protein

Coordinates

chr15:+:11025656..11030449

Molecular Weight (calculated)

76842.7 Da

IEP (calculated)

6.335

GRAVY (calculated)

-0.473

Length

701 amino acids

Sequence
(BLAST)

001: MSYESATSSS SLICGLIQSS WHVSVCGSFV LLGFTVSILS GGSSGMEVYD VSETRNHDAD MIEGADLNSH FTSPNIERTE VMINEGAPEF FVDQNLYYPA
101: ATNYGYYCSG FGTPGEQEDQ HRIFGVDGPN IQFTGAQNES FPYVYYSYGY AQSPYNPYNP YIPGAMIGAD GSFGGGQHYY TLPNYQSPVS APGYIPLVQP
201: DNFSDSSADS FFGASASVSK PDGRGLKPKF NSASGNFSRN SSIFLSNQTS SLARASERPR ANDGRKQGLT HASVSGSSFL NLASPAVHQS AVAKLRPKLH
301: IGKAVPNGGN GSSDVLGEQN RGPRVGRSKH QLSVKAYTTM AGDGNEQGNI VIYPDQYNME DFPLGYENAK FFVIKSYSED DVHKSIKYNV WSSTPHGNKK
401: LENAYEDAKK IAAEKSEVCP IFLLFSVNAS GQFCGVAEMV GTVDFSKNMD FWQQDKWSGS FPVKWHIIKD VPNPNFRHII LENNENKPVT NSRDAQEIMY
501: LKGLEMLKIF KNHTLKTSLL DDFMYYENRQ KIMQDEKAKF LVKSFDSPIF VPVLEAPQKL NFFVDVPTDN YEKNLKPKDD SDGLKHISFS SPEQIVGNSD
601: VTGIKHAHDE KDEKIAVDKE HISSILKIGS VTIAPKQVEA KQSVSNGNKE PVDVLTVGSM QVKVNGFPSS SGFLKVGSTP FDARALQPGK GDAAVKSGSQ
701: R

Best Arabidopsis Sequence Match ( AT3G17330.1 )
(BLAST)

001: MYTEGASDFV IDQSMYYPAY YSSGYDSSVG LQGGQNENAP YICYTPSYGY AQSPYNPYNP YIPGASIGVD SSFVGFQQYY SDPPYESAAS SPTYVPYVIQ
101: PDMVSNSSTD SLVANGGQSD GRGSMQRNGS AIAGLPKDAP KSTTTGQYKQ PGIPKNVSTT ASAHSLQGKT AYANTLLPYG KSDIANGVSS IASYSYKPCS
201: KIYDARGDNN TTGSTYTSEQ NRGSRTRRSR NQLIVKAYTT KAGNADAEGN IVINPDRYNK EDFSIEYSDA RFFVIKSYSE DDVHKSIKYG VWSSTLNGNK
301: KLQSVYEDAQ RIATEKSREC PIFLFFSVNS SGLFCGVAEM TGPVSFDRDM DFWQQDKWSG SFPVKWHIIK DVPNSYFRHI ILHNNENKPV TNSRDTQEII
401: LKQGLEVLKL FKHHAEKTSL LDDFMYYEDR QRLMQEERAR LPFRTFRRPF PVLNLDFSDR SKKSSKDVVK KPSVTSAETK VVQLKNSDGD EKSNTQEATD
501: DSTPSTLKFG SLAIKPTAGT TFNPTQPKPK PTPSLGSDHK SDSSEEVTGS LADDIVSVGS LPIKVKGSKE LSSKIAAVGT SPLSTQDQFR SKPGF

Arabidopsis Description

ECT6At3g17330 [Source:UniProtKB/TrEMBL;Acc:Q1JPL5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.