Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G128700.1 | Wheat | cytosol | 97.45 | 97.87 |
| TraesCS1A01G105700.1 | Wheat | cytosol | 94.33 | 94.87 |
| Zm00001d010826_P001 | Maize | cytosol | 29.18 | 49.76 |
| OQU77486 | Sorghum | cytosol | 49.58 | 49.44 |
| TraesCS3D01G199400.2 | Wheat | cytosol | 39.66 | 40.7 |
| KRH36908 | Soybean | cytosol | 21.39 | 34.01 |
| Bra018708.1-P | Field mustard | nucleus | 22.52 | 26.15 |
| CDX93645 | Canola | nucleus | 22.24 | 25.65 |
| CDY43306 | Canola | cytosol | 22.1 | 25.45 |
| VIT_05s0020g00460.t01 | Wine grape | cytosol | 25.35 | 25.07 |
| AT3G17330.1 | Thale cress | nucleus | 20.96 | 24.87 |
| KRH50636 | Soybean | cytosol | 23.94 | 24.32 |
| KRH02430 | Soybean | cytosol | 23.8 | 24.21 |
| AT1G48110.2 | Thale cress | nucleus | 21.67 | 23.94 |
| KRH11876 | Soybean | endoplasmic reticulum | 23.65 | 23.82 |
| Solyc12g099090.1.1 | Tomato | cytosol | 22.95 | 23.48 |
| PGSC0003DMT400011739 | Potato | cytosol | 22.8 | 23.03 |
| TraesCS7D01G276800.4 | Wheat | nucleus | 19.55 | 22.08 |
| TraesCS1D01G045100.1 | Wheat | nucleus | 19.55 | 21.5 |
| TraesCS5D01G439100.1 | Wheat | nucleus | 17.71 | 21.26 |
| TraesCS7D01G285000.1 | Wheat | endoplasmic reticulum | 18.13 | 20.91 |
| TraesCS5D01G396400.3 | Wheat | nucleus | 19.41 | 20.69 |
| TraesCS3D01G267900.1 | Wheat | nucleus | 18.98 | 19.48 |
| TraesCS5D01G439200.1 | Wheat | cytosol | 17.28 | 19.0 |
| TraesCS4D01G180500.5 | Wheat | cytosol, nucleus, plastid | 19.12 | 18.93 |
| TraesCS4D01G273200.4 | Wheat | cytosol | 19.26 | 18.81 |
| TraesCS2D01G012200.1 | Wheat | cytosol | 18.56 | 18.45 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G109300.1 | EnsemblPlantsGene:TraesCS1D01G109300 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF26 | PFAM:PF04146 |
| PFscan:PS50882 | SEG:seg | MapMan:16.5.2.1 | : | : | : |
Description
No Description!
Coordinates
chr1D:-:102773939..102777343
Molecular Weight (calculated)
78280.9 Da
IEP (calculated)
8.623
GRAVY (calculated)
-0.479
Length
706 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLEANSELI FGEEFCFPAN ATYYPTPYGP TGITLPAELY EHQAIWRCGD QDLHYLGQQA EGTSYSYYVV PDYGIAHSPR PRGPYPSEHC AIADGRFARS
101: REYLAKTADI VCHQPVPIPH YDVLPSAAQW GPASTSQTLM CNDSLFIPTD QGQSFPVVPK KGITWNPSLQ STSVSSKKFE NHAMLSTVQL HSTDPWKQNL
201: AAGSGTMVPA KLRRALQASR HSLHGGVPPV KSSPQTNPSY NYNASHVGSD LRKMAIAEKF QPSSKPRSYV NGLTGKLSSV CRPNLSKEKQ PRGSTSSEIV
301: ATSYTSRLHI GNPEGKIIIK TDQYNRDDFE VVYPNAKFFV IKSWGEANVH KSIKYGVWSS GLQGNKKLDS AFRDAQMIAA SSSTLCPVFL FFSVNESNHF
401: CGVAEMVGPV DFQKNMDFWS MDRWVGSFPV RWHIIKNIPN VALKCILLRN NEDKPVTSSK NTQEIHYVPG TSMLRIFKGS KTNGCLLDCF TVYEAEEARG
501: RKCRMSKLRR DAPRFIPVPK LSLHHAYVPR QPKADRILMD RIIRETHDLA GNGMQQSSWE EPGNLARYSA KESAQKENRS SGKQAREDVV KAVIYQQQPL
601: ASNMPAGPAG GQLTWEEVEV TLVEKDRSQT AANISSKAPE ENPTEVKNAL VHSASSTPET IYEEKKVIGE HCARAISPPM SEACSSCLIG DVLRIGSMLV
701: PMKMPN
101: REYLAKTADI VCHQPVPIPH YDVLPSAAQW GPASTSQTLM CNDSLFIPTD QGQSFPVVPK KGITWNPSLQ STSVSSKKFE NHAMLSTVQL HSTDPWKQNL
201: AAGSGTMVPA KLRRALQASR HSLHGGVPPV KSSPQTNPSY NYNASHVGSD LRKMAIAEKF QPSSKPRSYV NGLTGKLSSV CRPNLSKEKQ PRGSTSSEIV
301: ATSYTSRLHI GNPEGKIIIK TDQYNRDDFE VVYPNAKFFV IKSWGEANVH KSIKYGVWSS GLQGNKKLDS AFRDAQMIAA SSSTLCPVFL FFSVNESNHF
401: CGVAEMVGPV DFQKNMDFWS MDRWVGSFPV RWHIIKNIPN VALKCILLRN NEDKPVTSSK NTQEIHYVPG TSMLRIFKGS KTNGCLLDCF TVYEAEEARG
501: RKCRMSKLRR DAPRFIPVPK LSLHHAYVPR QPKADRILMD RIIRETHDLA GNGMQQSSWE EPGNLARYSA KESAQKENRS SGKQAREDVV KAVIYQQQPL
601: ASNMPAGPAG GQLTWEEVEV TLVEKDRSQT AANISSKAPE ENPTEVKNAL VHSASSTPET IYEEKKVIGE HCARAISPPM SEACSSCLIG DVLRIGSMLV
701: PMKMPN
001: MYTSEAAPDF VVDQGMYYPV DASYGYYCTG YESPGDWENH QMFFGVDGSE VQYTGGQNEN SPYICYTPSY GYAQSPYNPF NPYIPGASIG VDSAFVAPQQ
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK
101: FYSIPPYQSV ATSPTFVPYA IQPEIVSNSS TNSLVETGSA NRGRSDGRGS RQRSGTATAG LQRNDPKLPA GNSLGKISEK PRPNSGQSRQ SEMDKSDSTS
201: SSGQARQGRV TSVSAQPVDV VSSSRVSSFR QLDIAPPQLN DFSKIATNNN NIRPKLYGGH ANIIPDTVRE QNRGRRSRAL GNQLIVKAYT TKAGNADAEG
301: NIVINPSQYN KEDLRIDYSN AKFFVIKSYS EDDVHKSIKY NVWSSTLHGN KKLQSAYEDA QRIATEKSCE CPIFLFFSVN ASGLFCGMAE MTGPVSFDKD
401: MDFWQQDKWS GSFPVKWHII KDVPNSYFRH IILQNNENKP VTNSRDTQEI MLKQGLEVLK IFKDHMERTS LLDDFVYYES RQRVMQDERT RLPYRTFLND
501: LPLPRPDLSD RNKKTPLESF KKPSVISAKT EELPSKSEGN EETTVKEGNE EDTSSTQKKI SSLTIDPSGT DSNPTTVSHL NQKSQAKSKP NSSGSLKKTD
601: PSEVVDASLS DKNDSFKVTG SPAILTVGTI PLDPKSLQK
Arabidopsis Description
ECT7evolutionarily conserved C-terminal region 7 [Source:TAIR;Acc:AT1G48110]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.