Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G011400.1 | Wheat | nucleus | 98.73 | 98.59 |
| TraesCS2B01G010200.1 | Wheat | cytosol | 97.04 | 96.5 |
| HORVU2Hr1G023660.2 | Barley | nucleus | 92.25 | 92.38 |
| HORVU2Hr1G001810.8 | Barley | cytosol | 89.72 | 80.84 |
| Os05t0105600-01 | Rice | cytosol | 52.11 | 57.99 |
| Os04t0129300-01 | Rice | nucleus | 53.1 | 55.85 |
| KXG21015 | Sorghum | nucleus | 50.14 | 54.52 |
| KRH26322 | Soybean | cytosol | 9.44 | 52.34 |
| Zm00001d048501_P002 | Maize | cytosol | 47.46 | 44.46 |
| GSMUA_Achr6P12810_001 | Banana | nucleus | 20.99 | 42.33 |
| AT1G09810.1 | Thale cress | nucleus | 19.44 | 29.36 |
| PGSC0003DMT400064041 | Potato | cytosol | 23.24 | 28.95 |
| Solyc01g103540.2.1 | Tomato | nucleus | 22.39 | 28.65 |
| CDX94944 | Canola | nucleus | 19.86 | 28.37 |
| Bra019988.1-P | Field mustard | nucleus | 19.72 | 27.94 |
| CDX93476 | Canola | nucleus | 19.58 | 27.8 |
| TraesCS5D01G439100.1 | Wheat | nucleus | 22.96 | 27.72 |
| KRH06073 | Soybean | cytosol, nucleus, peroxisome | 19.15 | 27.42 |
| TraesCS1D01G045100.1 | Wheat | nucleus | 24.37 | 26.95 |
| TraesCS5D01G396400.3 | Wheat | nucleus | 24.93 | 26.74 |
| TraesCS3D01G267900.1 | Wheat | nucleus | 24.79 | 25.58 |
| TraesCS5D01G439200.1 | Wheat | cytosol | 22.82 | 25.23 |
| TraesCS7D01G276800.4 | Wheat | nucleus | 22.11 | 25.12 |
| TraesCS7D01G285000.1 | Wheat | endoplasmic reticulum | 20.85 | 24.18 |
| VIT_12s0035g00970.t01 | Wine grape | plastid | 23.94 | 24.01 |
| TraesCS4D01G273200.4 | Wheat | cytosol | 23.66 | 23.24 |
| TraesCS3D01G199400.2 | Wheat | cytosol | 19.3 | 19.91 |
| TraesCS4D01G180500.5 | Wheat | cytosol, nucleus, plastid | 19.58 | 19.5 |
| TraesCS1D01G109300.1 | Wheat | cytosol | 18.45 | 18.56 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G012200.1 | EnsemblPlantsGene:TraesCS2D01G012200 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF35 | PFAM:PF04146 |
| PFscan:PS50882 | SEG:seg | MapMan:16.5.2.1 | : | : | : |
Description
No Description!
Coordinates
chr2D:+:5762836..5768407
Molecular Weight (calculated)
79955.3 Da
IEP (calculated)
6.964
GRAVY (calculated)
-0.821
Length
710 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEAFDPPAS AAAATPEADN GASIFTRKNI WSDAAAEGDD DSSPWPWDGV KSEEDADFLS HANRALSFLD YEAESSECKY ATDIGSHVYP KEAMSPQSEY
101: DRQRPYLPLS SCSWDSSSSL EAMSGNRDAS GHVMAKGGTK SDIFAPRHDY LASCPTTGPH MRRSYTEAAK VDCSFDCHSE QHYKGLDRFT PFANCNGQSI
201: ECRSEIADMP RGGRCVDEAT SFSSRWCFEN GGRGSSLPGG LTYGDEIPSL SSRRCNGSGV LSRSSQWHYG AEISSLSSRQ GYGDEIPSLS NQKFNGISRS
301: NHWNYSAEIP SLSRRQSYRD EIPSLSSQKS NGISYPRQWQ QYGADIPSFS SRQGYGEEVP TMSHHWRCRD KIPLYSGQRC HDAEARRLSS YQQGPFRGNR
401: QPRDSFAHGI VSNQQVKMTA TRHTGTRPRV SNRVVNSTSN YRNGRRDNPP RNSEEIRDQV CGPRASKVNN TSTPTAKKDI LSPLVRRDQF NKSDFSIQYE
501: QAKFFMIKSY SEDDIHKGIK YNVWASTPNG NSKLDTAFHD AQILMKEKGT KCPVFLLFSV NTSGQFVGLA EMLGPVDFKK TMDFWQQNKW NGFFPVVWHI
601: VKDIPNRLFK HITLENNDNR PVTFSRDTQE IGLPQGLEVL KIFKAYRHGT SILDDFDFYE EKENTRCARK GINADSLHEA RLSYFGTDDL KSMGDIEANM
701: ESLNLHEPWD
101: DRQRPYLPLS SCSWDSSSSL EAMSGNRDAS GHVMAKGGTK SDIFAPRHDY LASCPTTGPH MRRSYTEAAK VDCSFDCHSE QHYKGLDRFT PFANCNGQSI
201: ECRSEIADMP RGGRCVDEAT SFSSRWCFEN GGRGSSLPGG LTYGDEIPSL SSRRCNGSGV LSRSSQWHYG AEISSLSSRQ GYGDEIPSLS NQKFNGISRS
301: NHWNYSAEIP SLSRRQSYRD EIPSLSSQKS NGISYPRQWQ QYGADIPSFS SRQGYGEEVP TMSHHWRCRD KIPLYSGQRC HDAEARRLSS YQQGPFRGNR
401: QPRDSFAHGI VSNQQVKMTA TRHTGTRPRV SNRVVNSTSN YRNGRRDNPP RNSEEIRDQV CGPRASKVNN TSTPTAKKDI LSPLVRRDQF NKSDFSIQYE
501: QAKFFMIKSY SEDDIHKGIK YNVWASTPNG NSKLDTAFHD AQILMKEKGT KCPVFLLFSV NTSGQFVGLA EMLGPVDFKK TMDFWQQNKW NGFFPVVWHI
601: VKDIPNRLFK HITLENNDNR PVTFSRDTQE IGLPQGLEVL KIFKAYRHGT SILDDFDFYE EKENTRCARK GINADSLHEA RLSYFGTDDL KSMGDIEANM
701: ESLNLHEPWD
001: MTSHVPKHPR KSFEDMVKNL KVDPLAKVTA STTSMVSAKE NKNQSEAEPS YYETLETYQG LPCPYGGYYG YYYPGLDGSV GEAKDNGYYG YGTEVQYPVM
101: QGENGSVIYL MPGFQSYDAS QTYMPINPVG VSSQALHSPM YAAQGYYQNQ FGYADVSSPT YLWDPVGDRY VYGVASYTPP LKQNISSSSH NHNNYYSKSK
201: NSFTGHGMGD RPKTPRKASQ NSYAPPPLLN QEKGRIAYPM DPVKKKSGAL NRDETEKAKA RTKENGTSMN DLANGQDHIT NGECESCSLD AEGNERSNGV
301: GSVIRRDQYN LPSFQTKYEE AIFFVIKSYS EDDIHKSIKY NVWSSTLNGN KKLDSAYQES QKKAADKSGK CPVFLFFSVN ASGQFCGVAE MIGRVDYEKS
401: MEFWQQDKWT GYFPVKWHII KDVPNPQLRH IILENNENKP VTNSRDTQEV RLPQGNEVLN IFKNYAAKTS ILDDFDFYEN REKVMVQKKL RFPPVLKKKE
501: EDLVADFKTM EMSNTVEEGN TELTGTVS
101: QGENGSVIYL MPGFQSYDAS QTYMPINPVG VSSQALHSPM YAAQGYYQNQ FGYADVSSPT YLWDPVGDRY VYGVASYTPP LKQNISSSSH NHNNYYSKSK
201: NSFTGHGMGD RPKTPRKASQ NSYAPPPLLN QEKGRIAYPM DPVKKKSGAL NRDETEKAKA RTKENGTSMN DLANGQDHIT NGECESCSLD AEGNERSNGV
301: GSVIRRDQYN LPSFQTKYEE AIFFVIKSYS EDDIHKSIKY NVWSSTLNGN KKLDSAYQES QKKAADKSGK CPVFLFFSVN ASGQFCGVAE MIGRVDYEKS
401: MEFWQQDKWT GYFPVKWHII KDVPNPQLRH IILENNENKP VTNSRDTQEV RLPQGNEVLN IFKNYAAKTS ILDDFDFYEN REKVMVQKKL RFPPVLKKKE
501: EDLVADFKTM EMSNTVEEGN TELTGTVS
Arabidopsis Description
ECT8Evolutionarily conserved C-terminal region 8 [Source:UniProtKB/TrEMBL;Acc:Q9FPE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.