Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G023660.2 | Barley | nucleus | 83.5 | 92.81 |
| TraesCS2D01G012200.1 | Wheat | cytosol | 80.84 | 89.72 |
| TraesCS2A01G011400.1 | Wheat | nucleus | 80.84 | 89.59 |
| TraesCS2B01G010200.1 | Wheat | cytosol | 80.46 | 88.8 |
| Os05t0105600-01 | Rice | cytosol | 46.57 | 57.52 |
| Os04t0129300-01 | Rice | nucleus | 47.34 | 55.26 |
| KXG21015 | Sorghum | nucleus | 45.56 | 54.98 |
| KRH26322 | Soybean | cytosol | 8.63 | 53.12 |
| Zm00001d048501_P002 | Maize | cytosol | 42.89 | 44.59 |
| GSMUA_Achr6P12810_001 | Banana | nucleus | 19.04 | 42.61 |
| AT1G09810.1 | Thale cress | nucleus | 17.89 | 30.0 |
| PGSC0003DMT400064041 | Potato | cytosol | 20.81 | 28.77 |
| Solyc01g103540.2.1 | Tomato | nucleus | 20.18 | 28.65 |
| CDX94944 | Canola | nucleus | 17.89 | 28.37 |
| KRH06073 | Soybean | cytosol, nucleus, peroxisome | 17.64 | 28.02 |
| Bra019988.1-P | Field mustard | nucleus | 17.77 | 27.94 |
| CDX93476 | Canola | nucleus | 17.64 | 27.8 |
| HORVU1Hr1G008330.2 | Barley | nucleus | 21.57 | 26.48 |
| HORVU5Hr1G094950.6 | Barley | cytosol, nucleus | 22.08 | 26.17 |
| HORVU7Hr1G069070.2 | Barley | cytosol | 18.91 | 25.25 |
| VIT_12s0035g00970.t01 | Wine grape | plastid | 21.57 | 24.01 |
| HORVU5Hr1G104380.1 | Barley | plastid | 19.92 | 23.75 |
| HORVU4Hr1G072940.4 | Barley | cytosol | 21.45 | 22.78 |
| HORVU7Hr1G058250.46 | Barley | cytosol, plastid | 13.58 | 22.57 |
| HORVU5Hr1G104390.3 | Barley | plastid | 19.67 | 22.53 |
| HORVU3Hr1G062620.8 | Barley | mitochondrion | 21.95 | 22.32 |
| HORVU3Hr1G045890.2 | Barley | endoplasmic reticulum, peroxisome, plasma membrane | 17.64 | 21.25 |
| HORVU4Hr1G052390.3 | Barley | golgi | 18.02 | 18.93 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G001810.8 | EnsemblPlantsGene:HORVU2Hr1G001810 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF35 | PFAM:PF04146 |
| PFscan:PS50882 | SEG:seg | UniParc:UPI000B48335A | UniProt:A0A287GWC7 | MapMan:16.5.2.1 | : |
Description
No Description!
Coordinates
chrchr2H:-:3742247..3747655
Molecular Weight (calculated)
89522.1 Da
IEP (calculated)
7.837
GRAVY (calculated)
-0.742
Length
788 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEACDPPPA SDSVAATDNG ASIFTKKNIW SDAAAEGDAD SPPWPWDSVK TEEDAEFLSH ANRALSFLDS NNSLPSQDYE AESSDCKYAT DIRSHVHPKE
101: AMSPRSEYDR QQPYLPLSSC SWDSSLSLEA MPDNPDASGH VMAKGGTKSD IFVPRHDYLM SCPTTGPHMR RSYPEAAKVD CSFDCHSEHH YKGSDRFTAF
201: TNCNGQSIEC RSEIVDMPRG SRCVDEATSF PSRWCFENGG RGSSLPRGLS YGDEIPSLSS RRCNGSGALS RSSQWNYGAE ISSLSSRQGY GDEIPSLSNQ
301: KFNGISRSNQ WNYSAEIASL SSRRSYHDEI PFLSSHKSNG ISYPRQWQQY GTDIPSFSSR QGYGEQVPTM SHHWRYRDKI PLYSGQRCHD AEVRQLSSYQ
401: QGPFRGNRQP RDNFAHGIVS NQQVKMTATR HTATRPRVSN RVVNSTTNFR NNRRDNPPRN SEEIRDQVCG PRASKVNNTS TPTVKKDILS PLVRRDQFNK
501: SDFSIQYEHA KFFMIKSYSE DDIHKGIKYN VWASTPNGNS KLDTAFHDAQ ILMKEKGTKC PVFLFFSVNT SGQFVGLAEM LGPVDFKKTM DFWQQNKWNG
601: FFPVVWHIVK DIPNRLFKHI TLENNDNRPV TFSRDTQEIG LPQGLEVLKI FKAYRHGTSI LDDFDFYEEK ENTRCARKGI NADSLHEARL SYFGTDDLKS
701: MGRHRGEHGE PEPPRALGLI WEWAVLRHVT VFDEPLTRSN EKRLIRRVGA ITQVNLKYAI ECLYFVWTIY SLPVNTYHIY LVSIVGLR
101: AMSPRSEYDR QQPYLPLSSC SWDSSLSLEA MPDNPDASGH VMAKGGTKSD IFVPRHDYLM SCPTTGPHMR RSYPEAAKVD CSFDCHSEHH YKGSDRFTAF
201: TNCNGQSIEC RSEIVDMPRG SRCVDEATSF PSRWCFENGG RGSSLPRGLS YGDEIPSLSS RRCNGSGALS RSSQWNYGAE ISSLSSRQGY GDEIPSLSNQ
301: KFNGISRSNQ WNYSAEIASL SSRRSYHDEI PFLSSHKSNG ISYPRQWQQY GTDIPSFSSR QGYGEQVPTM SHHWRYRDKI PLYSGQRCHD AEVRQLSSYQ
401: QGPFRGNRQP RDNFAHGIVS NQQVKMTATR HTATRPRVSN RVVNSTTNFR NNRRDNPPRN SEEIRDQVCG PRASKVNNTS TPTVKKDILS PLVRRDQFNK
501: SDFSIQYEHA KFFMIKSYSE DDIHKGIKYN VWASTPNGNS KLDTAFHDAQ ILMKEKGTKC PVFLFFSVNT SGQFVGLAEM LGPVDFKKTM DFWQQNKWNG
601: FFPVVWHIVK DIPNRLFKHI TLENNDNRPV TFSRDTQEIG LPQGLEVLKI FKAYRHGTSI LDDFDFYEEK ENTRCARKGI NADSLHEARL SYFGTDDLKS
701: MGRHRGEHGE PEPPRALGLI WEWAVLRHVT VFDEPLTRSN EKRLIRRVGA ITQVNLKYAI ECLYFVWTIY SLPVNTYHIY LVSIVGLR
001: MHFAGSDVVS SQPNDNGQAH TTDFRKGNHR DKNSSDVYAD STLRGDRPKG SNCLSQTSFS APKPLGNFNG AGRLPPNTQA HAFRPPFKGK EAAGQFLTFS
101: NQKTSCVPYS GYINGNSNNG FWDQRDHNKK PERNGESDYL VELKCGPRAN AKTRPPSESS PLKQNNSFAL ALRREMYNLP DFQTDYEDAK FFVIKSYSED
201: DVHKSIKYSV WSSTINGNKK LDAAFRDAET KTLEDGKKRP IFLFFSVNAS RQFVGLAEMV GYVDFNKDLD FWQVDKWSGF FPVEWHVVKD IPNWELRHII
301: LDNNEDKPVT HTRDTHEIKL KEGLQMLSIF KKYSAVTFLL DDMDFYEERE KSLRAKKEHK PATLRMDLFK EKDYDYEMEG NRRMNHQERG YNWNRSSNSK
401: TQASLVNQTK YLSIRGYSGY KKNTGNST
101: NQKTSCVPYS GYINGNSNNG FWDQRDHNKK PERNGESDYL VELKCGPRAN AKTRPPSESS PLKQNNSFAL ALRREMYNLP DFQTDYEDAK FFVIKSYSED
201: DVHKSIKYSV WSSTINGNKK LDAAFRDAET KTLEDGKKRP IFLFFSVNAS RQFVGLAEMV GYVDFNKDLD FWQVDKWSGF FPVEWHVVKD IPNWELRHII
301: LDNNEDKPVT HTRDTHEIKL KEGLQMLSIF KKYSAVTFLL DDMDFYEERE KSLRAKKEHK PATLRMDLFK EKDYDYEMEG NRRMNHQERG YNWNRSSNSK
401: TQASLVNQTK YLSIRGYSGY KKNTGNST
Arabidopsis Description
ECT11Evolutionarily conserved C-terminal region 11 [Source:UniProtKB/TrEMBL;Acc:Q56XH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.