Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G012200.1 | Wheat | cytosol | 92.38 | 92.25 |
| TraesCS2A01G011400.1 | Wheat | nucleus | 92.1 | 91.84 |
| TraesCS2B01G010200.1 | Wheat | cytosol | 92.38 | 91.74 |
| HORVU2Hr1G001810.8 | Barley | cytosol | 92.81 | 83.5 |
| Os05t0105600-01 | Rice | cytosol | 53.17 | 59.09 |
| Os04t0129300-01 | Rice | nucleus | 53.31 | 56.0 |
| KXG21015 | Sorghum | nucleus | 50.78 | 55.13 |
| KRH26322 | Soybean | cytosol | 9.45 | 52.34 |
| Zm00001d048501_P002 | Maize | cytosol | 48.52 | 45.38 |
| GSMUA_Achr6P12810_001 | Banana | nucleus | 20.87 | 42.05 |
| AT1G09810.1 | Thale cress | nucleus | 19.32 | 29.15 |
| PGSC0003DMT400064041 | Potato | cytosol | 23.41 | 29.12 |
| Solyc01g103540.2.1 | Tomato | nucleus | 22.57 | 28.83 |
| CDX94944 | Canola | nucleus | 19.75 | 28.17 |
| Bra019988.1-P | Field mustard | nucleus | 19.61 | 27.74 |
| KRH06073 | Soybean | cytosol, nucleus, peroxisome | 19.32 | 27.62 |
| CDX93476 | Canola | nucleus | 19.46 | 27.6 |
| HORVU1Hr1G008330.2 | Barley | nucleus | 23.98 | 26.48 |
| HORVU5Hr1G094950.6 | Barley | cytosol, nucleus | 24.54 | 26.17 |
| HORVU7Hr1G069070.2 | Barley | cytosol | 20.59 | 24.75 |
| HORVU5Hr1G104380.1 | Barley | plastid | 22.57 | 24.21 |
| VIT_12s0035g00970.t01 | Wine grape | plastid | 23.84 | 23.87 |
| HORVU5Hr1G104390.3 | Barley | plastid | 22.57 | 23.26 |
| HORVU7Hr1G058250.46 | Barley | cytosol, plastid | 15.09 | 22.57 |
| HORVU4Hr1G072940.4 | Barley | cytosol | 23.41 | 22.37 |
| HORVU3Hr1G062620.8 | Barley | mitochondrion | 24.4 | 22.32 |
| HORVU3Hr1G045890.2 | Barley | endoplasmic reticulum, peroxisome, plasma membrane | 19.32 | 20.95 |
| HORVU4Hr1G052390.3 | Barley | golgi | 19.32 | 18.27 |
Protein Annotations
| EMBL:AK368157 | EnsemblPlants:HORVU2Hr1G023660.2 | EnsemblPlantsGene:HORVU2Hr1G023660 | Gene3D:3.10.590.10 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR007275 | InterPro:YTH_domain | PANTHER:PTHR12357 | PANTHER:PTHR12357:SF35 |
| PFAM:PF04146 | PFscan:PS50882 | SEG:seg | UniParc:UPI0002007194 | UniProt:F2DW89 | MapMan:16.5.2.1 |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DW89]
Coordinates
chrchr2H:+:71219867..71229121
Molecular Weight (calculated)
80145.7 Da
IEP (calculated)
7.209
GRAVY (calculated)
-0.824
Length
709 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEACDPPAS VAATPATENG SSIFMKKNIW SDAAAEGDGD SSPWPWDSVK SEEDAEFLSH ANRALSFLDY EAESSDCKYA TDIRPHAYPK EAMSPRSEYD
101: RQQPYLPLSS CSWESSSSLE AMPGNPDASG HVMAKSGTKS DIFAPRRDYL MSCPTTGPHM RRSYPEAAKV DCSFDCHTEH HYKGSDRFTA FTNCNGQSIE
201: CRSEIVDMPR GGRSVDEATS FSSRWCFENG GRGSSLPRGL TYGDEIPSLS SRRCNGSGVL SRSSQWHYGA EISSLSSKQG YGDEIPSLSN QKFNGISCSN
301: QWNYSAEIPS LSSRRSYHDE IPSLSSHKSN GISYPRQWQQ YGTDIPSFSS RQGYGEQVPT MSHHWRYRDK IPLYSGQRCH DAEARQLSSY QQGPFRGNRQ
401: PRDNFSHGIV SNQQVKMTAT RHTATRPRVS NRVVNSTTNF RNNRRDNPPR NSEEIRDQVC GPRASKVNNT PTPTVKKDIL SPLVRRDQFN KSDFSVQYEH
501: AKFFMIKSYS EDDIHKGIKY NVWASTPNGN SKLDTAFHDA QILMKEKGTK CPVFLLFSVN TSGQFVGLAE MLGPVDFKKT MDFWQQNKWN GFFPVVWHIV
601: KDIPNRLFKH ITLENNDNRP VTFSRDTQEI GLPQGLEVLK IFKAYRHGTS ILDDFDFYEE KENTRCARKG INADSLHEAR LSYFGTDDLK SMGDIEASME
701: SLNLHEPWD
101: RQQPYLPLSS CSWESSSSLE AMPGNPDASG HVMAKSGTKS DIFAPRRDYL MSCPTTGPHM RRSYPEAAKV DCSFDCHTEH HYKGSDRFTA FTNCNGQSIE
201: CRSEIVDMPR GGRSVDEATS FSSRWCFENG GRGSSLPRGL TYGDEIPSLS SRRCNGSGVL SRSSQWHYGA EISSLSSKQG YGDEIPSLSN QKFNGISCSN
301: QWNYSAEIPS LSSRRSYHDE IPSLSSHKSN GISYPRQWQQ YGTDIPSFSS RQGYGEQVPT MSHHWRYRDK IPLYSGQRCH DAEARQLSSY QQGPFRGNRQ
401: PRDNFSHGIV SNQQVKMTAT RHTATRPRVS NRVVNSTTNF RNNRRDNPPR NSEEIRDQVC GPRASKVNNT PTPTVKKDIL SPLVRRDQFN KSDFSVQYEH
501: AKFFMIKSYS EDDIHKGIKY NVWASTPNGN SKLDTAFHDA QILMKEKGTK CPVFLLFSVN TSGQFVGLAE MLGPVDFKKT MDFWQQNKWN GFFPVVWHIV
601: KDIPNRLFKH ITLENNDNRP VTFSRDTQEI GLPQGLEVLK IFKAYRHGTS ILDDFDFYEE KENTRCARKG INADSLHEAR LSYFGTDDLK SMGDIEASME
701: SLNLHEPWD
001: MHFAGSDVVS SQPNDNGQAH TTDFRKGNHR DKNSSDVYAD STLRGDRPKG SNCLSQTSFS APKPLGNFNG AGRLPPNTQA HAFRPPFKGK EAAGQFLTFS
101: NQKTSCVPYS GYINGNSNNG FWDQRDHNKK PERNGESDYL VELKCGPRAN AKTRPPSESS PLKQNNSFAL ALRREMYNLP DFQTDYEDAK FFVIKSYSED
201: DVHKSIKYSV WSSTINGNKK LDAAFRDAET KTLEDGKKRP IFLFFSVNAS RQFVGLAEMV GYVDFNKDLD FWQVDKWSGF FPVEWHVVKD IPNWELRHII
301: LDNNEDKPVT HTRDTHEIKL KEGLQMLSIF KKYSAVTFLL DDMDFYEERE KSLRAKKEHK PATLRMDLFK EKDYDYEMEG NRRMNHQERG YNWNRSSNSK
401: TQASLVNQTK YLSIRGYSGY KKNTGNST
101: NQKTSCVPYS GYINGNSNNG FWDQRDHNKK PERNGESDYL VELKCGPRAN AKTRPPSESS PLKQNNSFAL ALRREMYNLP DFQTDYEDAK FFVIKSYSED
201: DVHKSIKYSV WSSTINGNKK LDAAFRDAET KTLEDGKKRP IFLFFSVNAS RQFVGLAEMV GYVDFNKDLD FWQVDKWSGF FPVEWHVVKD IPNWELRHII
301: LDNNEDKPVT HTRDTHEIKL KEGLQMLSIF KKYSAVTFLL DDMDFYEERE KSLRAKKEHK PATLRMDLFK EKDYDYEMEG NRRMNHQERG YNWNRSSNSK
401: TQASLVNQTK YLSIRGYSGY KKNTGNST
Arabidopsis Description
ECT11Evolutionarily conserved C-terminal region 11 [Source:UniProtKB/TrEMBL;Acc:Q56XH8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.