Factsheet for Zm00001d050551_P007

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05114	Sorghum	cytosol	89.73	96.63
Zm00001d016552_P002	Maize	cytosol	86.83	93.51
Os02t0504500-01	Rice	plasma membrane	84.15	91.06
TraesCS6A01G091500.1	Wheat	nucleus	79.02	86.13
HORVU6Hr1G016460.1	Barley	nucleus	78.79	85.89
TraesCS6B01G119800.1	Wheat	cytosol	78.79	85.89
TraesCS6D01G080400.1	Wheat	nucleus	78.35	85.4
GSMUA_Achr6P20940_001	Banana	cytosol	22.32	78.74
VIT_05s0029g01370.t01	Wine grape	nucleus	67.63	73.37
CDX86603	Canola	nucleus	66.74	73.28
CDY15524	Canola	nucleus	67.41	72.77
Bra030592.1-P	Field mustard	nucleus	67.19	72.71
CDY18265	Canola	nucleus	66.96	72.29
AT1G04850.1	Thale cress	cytosol	66.29	71.91
KRH58887	Soybean	endoplasmic reticulum	66.07	71.33
KRH42800	Soybean	endoplasmic reticulum	65.4	70.6
PGSC0003DMT400011617	Potato	nucleus	65.62	70.33
Solyc12g098420.1.1	Tomato	cytosol	65.4	70.26
GSMUA_Achr11P...	Banana	mitochondrion	31.47	58.75
Zm00001d049805_P001	Maize	cytosol	30.8	42.59
PGSC0003DMT400067909	Potato	nucleus	18.97	34.69
Solyc09g092040.2.1	Tomato	cytosol	17.63	31.85

Protein Annotations

Gene3D:1.10.8.10	Gene3D:1.20.58.2190	EntrezGene:100274362	Gene3D:3.90.70.10	MapMan:35.2	UniProt:A0A1D6Q270
ProteinID:AQK52702.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005515
InterPro:IPR013087	InterPro:IPR015940	PFAM:PF00627	PFAM:PF09409	ScanProsite:PS00028	PFscan:PS50030
PANTHER:PTHR13020	PANTHER:PTHR13020:SF33	InterPro:PUB-like_dom_sf	InterPro:PUB_domain	SMART:SM00165	SMART:SM00580
SUPFAM:SSF143503	SUPFAM:SSF46934	InterPro:UBA	InterPro:UBA-like_sf	UniParc:UPI0008452D98	EnsemblPlantsGene:Zm00001d050551
EnsemblPlants:Zm00001d050551_P007	EnsemblPlants:Zm00001d050551_T007	InterPro:Znf_C2H2_type	SEG:seg	:	:

Description

ubiquitin-associated (UBA)/TS-N domain-containing protein

Coordinates

chr4:+:99642552..99667054

Molecular Weight (calculated)

50654.3 Da

IEP (calculated)

6.243

GRAVY (calculated)

-0.809

Length

448 amino acids

Sequence
(BLAST)

001: MAGLSLLCGD CGAQLRSVEE AQAHAEATNH ANFVESTEAV LNFVCSDCGK PCRSQTEVDL HTKRTGHTEF ADKTAEAAKP IDLEAPLKPA SEDVMDVDTS
101: ASASGEPQEM VVPEVNKEML TDLEGMGFST ARATRVLHFS GNSTIEGAIN WLSEHQEDID IDEMPLVPAN SKTEDNKPSL TPEEMKIKAQ ELRDRARKKK
201: EEEERRMERE REKMLSSVMC GRTYTRRALD VRRGAERAAR TQEGKERIRI GKELLEAKRI EEQNERKRMI ELRKLEKEEE KRAREKIRQK LEEDKAERRR
301: KLGLPPEDPA AAKPSAPLPV EEKKSALPVR PATKAERMRD CLRNLKQQNK DDDAKVKRAF QTLLTYIGNV AKNPDEEKFR KIRLTNATFQ ERVGNLHVGI
401: EFLELCGFEK LEGNEYLFLA REKVDKAILN TAGAELNSAI TNPFFGVL

Best Arabidopsis Sequence Match ( AT1G04850.1 )
(BLAST)

001: MAGVSLKCGD CGTLLKSVEE AQEHAELTSH SNFAESTEAV LNLVCTTCTK PCRSKIESDL HTKRTGHTEF VDKTLETIKP ISLEAPKVAM EIDDNASGSG
101: EAAEEMVVPD VDNNILEELE AMGFPKARAT RALHYSGNAS LEAAVNWVVE HENDPDVDEM PKVPSNSNVG PAKPALTPEE VKLKAQELRE RARKKKEEEE
201: KRMEREREKE RIRIGKELLE AKRMEEVNER KRLMFLRKAE KEEEKRAREK IRQKLEEDKA ERRRKLGLPP EDPATAAAKP SVPVVEEKKV TLPIRPATKT
301: EQMRECLRSL KQAHKEDDAK VKRAFQTLLT YMGNVAKNPD EEKFRKIRLT NQTFQERVGS LRGGIEFMEL CGFEKIEGGE FLFLPRDKID SAIINSAGTE
401: LNSAINNPFF GVL

Arabidopsis Description

F13M7.16 protein [Source:UniProtKB/TrEMBL;Acc:Q9MAT3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.