Factsheet for GSMUA_Achr11P08610_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
extracellular 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P20940_001	Banana	cytosol	38.33	72.44
VIT_05s0029g01370.t01	Wine grape	nucleus	59.58	34.62
KRH58887	Soybean	endoplasmic reticulum	58.75	33.98
Os02t0504500-01	Rice	plasma membrane	58.33	33.82
Zm00001d016552_P002	Maize	cytosol	58.33	33.65
EES05114	Sorghum	cytosol	58.33	33.65
KRH42800	Soybean	endoplasmic reticulum	57.08	33.01
TraesCS6D01G080400.1	Wheat	nucleus	55.83	32.6
HORVU6Hr1G016460.1	Barley	nucleus	55.83	32.6
TraesCS6A01G091500.1	Wheat	nucleus	55.83	32.6
CDX86603	Canola	nucleus	55.42	32.6
AT1G04850.1	Thale cress	cytosol	55.83	32.45
TraesCS6B01G119800.1	Wheat	cytosol	55.42	32.36
CDY15524	Canola	nucleus	55.83	32.29
Bra030592.1-P	Field mustard	nucleus	55.42	32.13
Solyc12g098420.1.1	Tomato	cytosol	55.0	31.65
CDY18265	Canola	nucleus	54.58	31.57
Zm00001d050551_P007	Maize	cytosol	58.75	31.47
PGSC0003DMT400011617	Potato	nucleus	54.58	31.34
PGSC0003DMT400067909	Potato	nucleus	29.58	28.98
Solyc09g092040.2.1	Tomato	cytosol	29.17	28.23
GSMUA_Achr6P20930_001	Banana	nucleus	23.33	18.48
GSMUA_Achr11P...	Banana	cytosol	3.33	7.77

Protein Annotations

EnsemblPlants:GSMUA_Achr11P08610_001	EnsemblPlants:GSMUA_Achr11T08610_001	EnsemblPlantsGene:GSMUA_Achr11G08610_001	Gene3D:1.20.58.2190	InterPro:PUB-like_dom_sf	InterPro:PUB_domain
ncoils:Coil	PANTHER:PTHR13020	PANTHER:PTHR13020:SF33	PFAM:PF09409	SMART:SM00580	SUPFAM:SSF143503
UniParc:UPI0002963B87	UniProt:M0RQJ1	MapMan:35.2	:	:	:

Description

ZOS2-07 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G08610_001]

Coordinates

chr11:+:6673121..6676646

Molecular Weight (calculated)

27458.5 Da

IEP (calculated)

10.411

GRAVY (calculated)

-0.568

Length

240 amino acids

Sequence
(BLAST)

001: MFGILILKRW PTFVATICKS KITISFLQSS ENISGYIGDR IRAGKELLQA KQINEENERK RLVTVQLIYK KEQEKRAREK ILQKLREDKA ERRSKLGLQP
101: QDPGDAKSAL PSQGKKSSVS VNPATKAEHM RDCLRSLKKT HKDDDARVKR AFQTLLIYVR NVAMNPDAEK FRKIRLGNPN FQERVARLKG GMEFLELCGF
201: EKLEGDEYLY LPRDKVDMAV LSAALSQLNS AMENPFFGVL

Best Arabidopsis Sequence Match ( AT1G04850.1 )
(BLAST)

001: MAGVSLKCGD CGTLLKSVEE AQEHAELTSH SNFAESTEAV LNLVCTTCTK PCRSKIESDL HTKRTGHTEF VDKTLETIKP ISLEAPKVAM EIDDNASGSG
101: EAAEEMVVPD VDNNILEELE AMGFPKARAT RALHYSGNAS LEAAVNWVVE HENDPDVDEM PKVPSNSNVG PAKPALTPEE VKLKAQELRE RARKKKEEEE
201: KRMEREREKE RIRIGKELLE AKRMEEVNER KRLMFLRKAE KEEEKRAREK IRQKLEEDKA ERRRKLGLPP EDPATAAAKP SVPVVEEKKV TLPIRPATKT
301: EQMRECLRSL KQAHKEDDAK VKRAFQTLLT YMGNVAKNPD EEKFRKIRLT NQTFQERVGS LRGGIEFMEL CGFEKIEGGE FLFLPRDKID SAIINSAGTE
401: LNSAINNPFF GVL

Arabidopsis Description

F13M7.16 protein [Source:UniProtKB/TrEMBL;Acc:Q9MAT3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.