Factsheet for GSMUA_Achr11P08600_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0526700-00	Rice	plasma membrane	45.63	24.1
GSMUA_Achr6P20930_001	Banana	nucleus	52.43	17.82
Zm00001d049805_P001	Maize	cytosol	48.54	15.43
EES14200	Sorghum	cytosol	48.54	14.37
VIT_05s0029g01370.t01	Wine grape	nucleus	56.31	14.04
KRH58887	Soybean	endoplasmic reticulum	56.31	13.98
KRH42800	Soybean	endoplasmic reticulum	56.31	13.98
TraesCS7D01G258300.1	Wheat	cytosol	46.6	13.79
CDX86603	Canola	nucleus	54.37	13.73
Bra030592.1-P	Field mustard	nucleus	54.37	13.53
CDY15524	Canola	nucleus	54.37	13.49
TraesCS7B01G154400.1	Wheat	cytosol	44.66	13.26
AT1G04850.1	Thale cress	cytosol	52.43	13.08
CDY18265	Canola	nucleus	52.43	13.01
TraesCS7A01G257500.2	Wheat	cytosol	48.54	12.99
Solyc12g098420.1.1	Tomato	cytosol	50.49	12.47
PGSC0003DMT400011617	Potato	nucleus	49.51	12.2
PGSC0003DMT400067909	Potato	nucleus	8.74	3.67
GSMUA_Achr11P...	Banana	mitochondrion	7.77	3.33
Solyc09g092040.2.1	Tomato	cytosol	7.77	3.23
GSMUA_Achr6P20940_001	Banana	cytosol	3.88	3.15

Protein Annotations

EnsemblPlants:GSMUA_Achr11P08600_001	EnsemblPlants:GSMUA_Achr11T08600_001	EnsemblPlantsGene:GSMUA_Achr11G08600_001	Gene3D:1.10.8.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015940	InterPro:UBA	InterPro:UBA-like_sf	PANTHER:PTHR13020	PANTHER:PTHR13020:SF33
PFAM:PF00627	PFscan:PS50030	SMART:SM00165	SUPFAM:SSF46934	UniParc:UPI0002964EAE	UniProt:M0RQJ0
MapMan:35.2	:	:	:	:	:

Description

ubiquitin-associated protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G08600_001]

Coordinates

chr11:+:6668737..6670927

Molecular Weight (calculated)

11807.3 Da

IEP (calculated)

4.845

GRAVY (calculated)

-0.146

Length

103 amino acids

Sequence
(BLAST)

001: MAVPEVDKQM LRELELMGFP TARATRALHF SGNSTIEAAI NWVIEHENDP DIDQMPLVPI NIEIENGTSW MTPDEVKIKL QKLRCVLISF CFFCTKEHHQ
101: LPS

Best Arabidopsis Sequence Match ( AT1G04850.1 )
(BLAST)

001: MAGVSLKCGD CGTLLKSVEE AQEHAELTSH SNFAESTEAV LNLVCTTCTK PCRSKIESDL HTKRTGHTEF VDKTLETIKP ISLEAPKVAM EIDDNASGSG
101: EAAEEMVVPD VDNNILEELE AMGFPKARAT RALHYSGNAS LEAAVNWVVE HENDPDVDEM PKVPSNSNVG PAKPALTPEE VKLKAQELRE RARKKKEEEE
201: KRMEREREKE RIRIGKELLE AKRMEEVNER KRLMFLRKAE KEEEKRAREK IRQKLEEDKA ERRRKLGLPP EDPATAAAKP SVPVVEEKKV TLPIRPATKT
301: EQMRECLRSL KQAHKEDDAK VKRAFQTLLT YMGNVAKNPD EEKFRKIRLT NQTFQERVGS LRGGIEFMEL CGFEKIEGGE FLFLPRDKID SAIINSAGTE
401: LNSAINNPFF GVL

Arabidopsis Description

F13M7.16 protein [Source:UniProtKB/TrEMBL;Acc:Q9MAT3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.