Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G258300.1 | Wheat | cytosol | 97.12 | 96.84 |
| TraesCS7A01G257500.2 | Wheat | cytosol | 94.24 | 84.94 |
| EES14200 | Sorghum | cytosol | 78.1 | 77.87 |
| Zm00001d049805_P001 | Maize | cytosol | 69.16 | 74.07 |
| GSMUA_Achr11P... | Banana | cytosol | 13.26 | 44.66 |
| Os08t0526700-00 | Rice | plasma membrane | 24.5 | 43.59 |
| KRH58887 | Soybean | endoplasmic reticulum | 43.8 | 36.63 |
| KRH42800 | Soybean | endoplasmic reticulum | 43.52 | 36.39 |
| VIT_05s0029g01370.t01 | Wine grape | nucleus | 43.23 | 36.32 |
| AT1G04850.1 | Thale cress | cytosol | 42.65 | 35.84 |
| CDY18265 | Canola | nucleus | 42.65 | 35.66 |
| CDX86603 | Canola | nucleus | 41.79 | 35.54 |
| CDY15524 | Canola | nucleus | 42.07 | 35.18 |
| Bra030592.1-P | Field mustard | nucleus | 41.79 | 35.02 |
| TraesCS6B01G119800.1 | Wheat | cytosol | 41.21 | 34.79 |
| Solyc12g098420.1.1 | Tomato | cytosol | 41.21 | 34.29 |
| PGSC0003DMT400011617 | Potato | nucleus | 40.92 | 33.97 |
| PGSC0003DMT400067909 | Potato | nucleus | 21.33 | 30.2 |
| Solyc09g092040.2.1 | Tomato | cytosol | 20.17 | 28.23 |
Protein Annotations
| Gene3D:1.10.8.10 | Gene3D:1.20.58.2190 | MapMan:35.2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR015940 | PFAM:PF00627 | PFAM:PF09409 | PFscan:PS50030 | PANTHER:PTHR13020 |
| PANTHER:PTHR13020:SF33 | InterPro:PUB-like_dom_sf | InterPro:PUB_domain | SMART:SM00165 | SMART:SM00580 | SUPFAM:SSF143503 |
| SUPFAM:SSF46934 | EnsemblPlantsGene:TraesCS7B01G154400 | EnsemblPlants:TraesCS7B01G154400.1 | InterPro:UBA | InterPro:UBA-like_sf | TIGR:cd10461 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:205718689..205724047
Molecular Weight (calculated)
39861.7 Da
IEP (calculated)
9.874
GRAVY (calculated)
-0.859
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVPQVDKKM LGELEVMGFP AVRSIRALHY SGNSNLESAI NWLLEHESDS DNDQLPLVSR EISIECGDTS NEVRNSAQGM RTHAQERKSE EQATAGSQKE
101: ISEVERELNA NEHEEEDRKR VLALHKSKRV EEEKSRGRIR NQLQEDKRVR IQAAKDVMEA KRTLEENQRK RMMESRKAEQ EEKRARERIR QRIEDDKAER
201: RRGLGLPREN TVASPPIVTL AKVKPIEPIV TSEQLRDCLR NLKKNHKDDN ARVKRAFQIL LKIVANIVKN PEEEKFRRIR LSNPVFKDRV GNLQGGVEFL
301: ELCGFQKLRN NSYLVMPRGK VDVALLNAAG VEIASAMENP YFGLLSK
101: ISEVERELNA NEHEEEDRKR VLALHKSKRV EEEKSRGRIR NQLQEDKRVR IQAAKDVMEA KRTLEENQRK RMMESRKAEQ EEKRARERIR QRIEDDKAER
201: RRGLGLPREN TVASPPIVTL AKVKPIEPIV TSEQLRDCLR NLKKNHKDDN ARVKRAFQIL LKIVANIVKN PEEEKFRRIR LSNPVFKDRV GNLQGGVEFL
301: ELCGFQKLRN NSYLVMPRGK VDVALLNAAG VEIASAMENP YFGLLSK
001: MSDGTENAAI EVNHGLLKEL EDMGFSMARA AWALHHSGNS SLEAAVNWII DHENESQFEN MPLVEFNIEI ESPNPSDDTA ETSHARAKEL SEQARKLREE
101: QETKRERERE KERIRAGKEL METKRIAEEN ERKRNIALRK AEKDEEKKAR EKIMLKVNAD KLERKRRLGL PTETESASTS NPVSPLDPKR IVMSSPSVVS
201: KAEEMRECLR SLRRNHKDED PRITRRVFET LLTIVRNVAK KPDEERYRRI RLKNRLFHER VGRYKEGIEF MELCGFKRVE GSEFLSLSKR DSDINRLRDA
301: AFLLNSASAN PFFGLLSTEA ERP
101: QETKRERERE KERIRAGKEL METKRIAEEN ERKRNIALRK AEKDEEKKAR EKIMLKVNAD KLERKRRLGL PTETESASTS NPVSPLDPKR IVMSSPSVVS
201: KAEEMRECLR SLRRNHKDED PRITRRVFET LLTIVRNVAK KPDEERYRRI RLKNRLFHER VGRYKEGIEF MELCGFKRVE GSEFLSLSKR DSDINRLRDA
301: AFLLNSASAN PFFGLLSTEA ERP
Arabidopsis Description
Ubiquitin-associated (UBA)/TS-N domain protein [Source:UniProtKB/TrEMBL;Acc:Q5XV09]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.