Factsheet for TraesCS7A01G257500.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G258300.1	Wheat	cytosol	85.71	94.83
TraesCS7B01G154400.1	Wheat	cytosol	84.94	94.24
EES14200	Sorghum	cytosol	72.73	80.46
Zm00001d049805_P001	Maize	cytosol	64.42	76.54
GSMUA_Achr11P...	Banana	cytosol	12.99	48.54
Os08t0526700-00	Rice	plasma membrane	23.12	45.64
KRH42800	Soybean	endoplasmic reticulum	40.52	37.59
KRH58887	Soybean	endoplasmic reticulum	40.26	37.35
VIT_05s0029g01370.t01	Wine grape	nucleus	39.74	37.05
AT1G04850.1	Thale cress	cytosol	39.48	36.8
CDY18265	Canola	nucleus	39.48	36.63
CDX86603	Canola	nucleus	38.7	36.52
CDY15524	Canola	nucleus	38.96	36.14
Bra030592.1-P	Field mustard	nucleus	38.7	35.99
TraesCS6A01G091500.1	Wheat	nucleus	38.18	35.77
Solyc12g098420.1.1	Tomato	cytosol	38.18	35.25
PGSC0003DMT400011617	Potato	nucleus	37.92	34.93
PGSC0003DMT400067909	Potato	nucleus	18.44	28.98
Solyc09g092040.2.1	Tomato	cytosol	18.18	28.23

Protein Annotations

Gene3D:1.10.8.10	Gene3D:1.20.58.2190	MapMan:35.2	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015940	PFAM:PF00627	PFAM:PF03634	PFAM:PF09409	PFscan:PS50030
PANTHER:PTHR13020	PANTHER:PTHR13020:SF33	InterPro:PUB-like_dom_sf	InterPro:PUB_domain	SMART:SM00165	SMART:SM00580
SUPFAM:SSF143503	SUPFAM:SSF46934	EnsemblPlantsGene:TraesCS7A01G257500	EnsemblPlants:TraesCS7A01G257500.2	InterPro:Transcription_factor_TCP	InterPro:UBA
InterPro:UBA-like_sf	TIGR:cd10461	TIGR:cd14290	SEG:seg	:	:

Description

No Description!

Coordinates

chr7A:+:247066751..247071894

Molecular Weight (calculated)

44422.3 Da

IEP (calculated)

9.938

GRAVY (calculated)

-0.809

Length

385 amino acids

Sequence
(BLAST)

001: MAVPQVDKKM LGELEVMGFP AVRSIRALHY SGNSNLESAI NWLLEHESDP DIDQLPLVSR EISIECGDTS SEVRNSVQGM SLNLGMHGYL TKRNRGLLLR
101: FTDYRWRICI HEKLIYSKTH AQARKPEEQT TAGSQKETSE VERELNANEH EEEDRKRVLA LHKSKRDEEE KARGRIRNQL QEDKRERIQA AKDVIEAKRT
201: LEENQRKRMM ESRKAEQEEE KRARERIRQR IEDDKAERRR GLGLPRENTV ASAPIVTLAK VKPIEPVVTS EQLRDCLRTL KKNHKDDNAR VKRAFQILLK
301: IVANIVKNPE EERFRRIRLS NPVFKDRVGN LQGGVEFLEL CGFQKLRNNS YLVMPRGKAD VALLNAAGVE IASAMENPYF GLLSK

Best Arabidopsis Sequence Match ( AT5G48690.2 )
(BLAST)

001: MRTNRSLRIC LWWSLTLRLS LQIHLMILQK LLMQEQKNYR KEQARKLREE QETKRERERE KERIRAGKEL METKRIAEEN ERKRNIALRK AEKDEEKKAR
101: EKIMLKVNAD KLERKRRLGL PTETESASTS NPVSPLDPKR IVMSSPSVVS KAEEMRECLR SLRRNHKDED PRITRRVFET LLTIVRNVAK KPDEERYRRI
201: RLKNRLFHER VGRYKEGIEF MELCGFKRVE GSEFLSLSKR DSDINRLRDA AFLLNSASAN PFFGLLSTEA ERP

Arabidopsis Description

Ubiquitin-associated (UBA)/TS-N domain protein [Source:UniProtKB/TrEMBL;Acc:Q5XV09]
SUBAcon: [mitochondrion,endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.