Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G154400.1 | Wheat | cytosol | 96.84 | 97.12 |
| TraesCS7A01G257500.2 | Wheat | cytosol | 94.83 | 85.71 |
| EES14200 | Sorghum | cytosol | 79.02 | 79.02 |
| Zm00001d049805_P001 | Maize | cytosol | 70.11 | 75.31 |
| GSMUA_Achr11P... | Banana | cytosol | 13.79 | 46.6 |
| Os08t0526700-00 | Rice | plasma membrane | 25.57 | 45.64 |
| KRH58887 | Soybean | endoplasmic reticulum | 44.25 | 37.11 |
| KRH42800 | Soybean | endoplasmic reticulum | 43.97 | 36.87 |
| VIT_05s0029g01370.t01 | Wine grape | nucleus | 43.39 | 36.56 |
| AT1G04850.1 | Thale cress | cytosol | 43.1 | 36.32 |
| CDY18265 | Canola | nucleus | 43.1 | 36.14 |
| CDX86603 | Canola | nucleus | 42.24 | 36.03 |
| TraesCS6D01G080400.1 | Wheat | nucleus | 42.53 | 36.01 |
| CDY15524 | Canola | nucleus | 42.53 | 35.66 |
| Bra030592.1-P | Field mustard | nucleus | 42.24 | 35.51 |
| Solyc12g098420.1.1 | Tomato | cytosol | 41.38 | 34.53 |
| PGSC0003DMT400011617 | Potato | nucleus | 41.09 | 34.21 |
| PGSC0003DMT400067909 | Potato | nucleus | 21.26 | 30.2 |
| Solyc09g092040.2.1 | Tomato | cytosol | 19.54 | 27.42 |
Protein Annotations
| Gene3D:1.10.8.10 | Gene3D:1.20.58.2190 | MapMan:35.2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR015940 | PFAM:PF00627 | PFAM:PF09409 | PFscan:PS50030 | PANTHER:PTHR13020 |
| PANTHER:PTHR13020:SF33 | InterPro:PUB-like_dom_sf | InterPro:PUB_domain | SMART:SM00165 | SMART:SM00580 | SUPFAM:SSF143503 |
| SUPFAM:SSF46934 | EnsemblPlantsGene:TraesCS7D01G258300 | EnsemblPlants:TraesCS7D01G258300.1 | InterPro:UBA | InterPro:UBA-like_sf | TIGR:cd10461 |
| TIGR:cd14290 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:234130511..234135954
Molecular Weight (calculated)
40099.0 Da
IEP (calculated)
9.742
GRAVY (calculated)
-0.891
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVPQVDKKM LGELEVMGFP AVRSIRALHY SGNSNLESAI NWLLEHESDP DIDQLPLVSR EISIECGDTS NEVRNSAQGM RTHAQERKSE EQATAGSQKE
101: ISQVERELNA NEHEEEDRKR VLALHKSKRD EEEKSRGRIR NQLQEDKRER IQAAKDVMEA KRTLEENQRK RMMESRKAEQ EEEKRARERI RQRIEDDKAE
201: RRRGLGLPRE NTVASPPIVT LAKVKPIEPI VTSEQLRDCL RNLKKNHKDD NVRVKRAFQI LLKIVANIVK NPEEEKFRRI RLNNPVFKDR VGNLQGGVEF
301: LELCGFQKLR NNSYLVMPRG KVDVALLNAA GVQIASAMEN PYFGLLSK
101: ISQVERELNA NEHEEEDRKR VLALHKSKRD EEEKSRGRIR NQLQEDKRER IQAAKDVMEA KRTLEENQRK RMMESRKAEQ EEEKRARERI RQRIEDDKAE
201: RRRGLGLPRE NTVASPPIVT LAKVKPIEPI VTSEQLRDCL RNLKKNHKDD NVRVKRAFQI LLKIVANIVK NPEEEKFRRI RLNNPVFKDR VGNLQGGVEF
301: LELCGFQKLR NNSYLVMPRG KVDVALLNAA GVQIASAMEN PYFGLLSK
001: MAGVSLKCGD CGTLLKSVEE AQEHAELTSH SNFAESTEAV LNLVCTTCTK PCRSKIESDL HTKRTGHTEF VDKTLETIKP ISLEAPKVAM EIDDNASGSG
101: EAAEEMVVPD VDNNILEELE AMGFPKARAT RALHYSGNAS LEAAVNWVVE HENDPDVDEM PKVPSNSNVG PAKPALTPEE VKLKAQELRE RARKKKEEEE
201: KRMEREREKE RIRIGKELLE AKRMEEVNER KRLMFLRKAE KEEEKRAREK IRQKLEEDKA ERRRKLGLPP EDPATAAAKP SVPVVEEKKV TLPIRPATKT
301: EQMRECLRSL KQAHKEDDAK VKRAFQTLLT YMGNVAKNPD EEKFRKIRLT NQTFQERVGS LRGGIEFMEL CGFEKIEGGE FLFLPRDKID SAIINSAGTE
401: LNSAINNPFF GVL
101: EAAEEMVVPD VDNNILEELE AMGFPKARAT RALHYSGNAS LEAAVNWVVE HENDPDVDEM PKVPSNSNVG PAKPALTPEE VKLKAQELRE RARKKKEEEE
201: KRMEREREKE RIRIGKELLE AKRMEEVNER KRLMFLRKAE KEEEKRAREK IRQKLEEDKA ERRRKLGLPP EDPATAAAKP SVPVVEEKKV TLPIRPATKT
301: EQMRECLRSL KQAHKEDDAK VKRAFQTLLT YMGNVAKNPD EEKFRKIRLT NQTFQERVGS LRGGIEFMEL CGFEKIEGGE FLFLPRDKID SAIINSAGTE
401: LNSAINNPFF GVL
Arabidopsis Description
F13M7.16 protein [Source:UniProtKB/TrEMBL;Acc:Q9MAT3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.