Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 1
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 24.1 | 45.63 |
| Zm00001d049805_P001 | Maize | cytosol | 44.62 | 26.85 |
| EES14200 | Sorghum | cytosol | 46.15 | 25.86 |
| TraesCS7D01G258300.1 | Wheat | cytosol | 45.64 | 25.57 |
| TraesCS7B01G154400.1 | Wheat | cytosol | 43.59 | 24.5 |
| TraesCS7A01G257500.2 | Wheat | cytosol | 45.64 | 23.12 |
| VIT_05s0029g01370.t01 | Wine grape | nucleus | 36.41 | 17.19 |
| KRH58887 | Soybean | endoplasmic reticulum | 36.41 | 17.11 |
| Solyc12g098420.1.1 | Tomato | cytosol | 36.41 | 17.03 |
| PGSC0003DMT400011617 | Potato | nucleus | 36.41 | 16.99 |
| CDX86603 | Canola | nucleus | 35.38 | 16.91 |
| Bra030592.1-P | Field mustard | nucleus | 35.38 | 16.67 |
| KRH42800 | Soybean | endoplasmic reticulum | 35.38 | 16.63 |
| CDY15524 | Canola | nucleus | 35.38 | 16.63 |
| AT1G04850.1 | Thale cress | cytosol | 34.36 | 16.22 |
| Os02t0504500-01 | Rice | plasma membrane | 34.36 | 16.18 |
| CDY18265 | Canola | nucleus | 34.36 | 16.14 |
| PGSC0003DMT400067909 | Potato | nucleus | 10.77 | 8.57 |
| Solyc09g092040.2.1 | Tomato | cytosol | 10.26 | 8.06 |
Protein Annotations
| EnsemblPlants:Os08t0526700-00 | EnsemblPlantsGene:Os08g0526700 | Gene3D:1.10.8.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015940 | InterPro:UBA | InterPro:UBA-like_sf | ncoils:Coil | PANTHER:PTHR13020 | PANTHER:PTHR13020:SF33 |
| PFAM:PF00627 | PFscan:PS50030 | ProteinID:BAT06351.1 | SignalP:SignalP-noTM | SMART:SM00165 | SUPFAM:SSF46934 |
| UniParc:UPI000393A1D4 | UniProt:A0A0P0XI76 | MapMan:35.2 | : | : | : |
Description
Similar to UBA/UBX 33.3 kDa protein. (Os08t0526700-00)
Coordinates
chr8:+:26214358..26218970
Molecular Weight (calculated)
22722.9 Da
IEP (calculated)
5.253
GRAVY (calculated)
-0.889
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSRMLLFLF IYVSSRMATP QLDKRILSEL ELMGFPTARS IRALHFSGNS SLESAINWLL EHENDPDIDQ LPLIPREINI ECGDTPNEAR NDIQGMRADA
101: QESKPEESTA AGRQKETSQV ERELNADQNE DEVRRRIIEL FKSKQDGQER ERGRIRNQLQ EDKRERIRAA KDLMEAKRTL EENQRKRFVS YATCM
101: QESKPEESTA AGRQKETSQV ERELNADQNE DEVRRRIIEL FKSKQDGQER ERGRIRNQLQ EDKRERIRAA KDLMEAKRTL EENQRKRFVS YATCM
001: MAGVSLKCGD CGTLLKSVEE AQEHAELTSH SNFAESTEAV LNLVCTTCTK PCRSKIESDL HTKRTGHTEF VDKTLETIKP ISLEAPKVAM EIDDNASGSG
101: EAAEEMVVPD VDNNILEELE AMGFPKARAT RALHYSGNAS LEAAVNWVVE HENDPDVDEM PKVPSNSNVG PAKPALTPEE VKLKAQELRE RARKKKEEEE
201: KRMEREREKE RIRIGKELLE AKRMEEVNER KRLMFLRKAE KEEEKRAREK IRQKLEEDKA ERRRKLGLPP EDPATAAAKP SVPVVEEKKV TLPIRPATKT
301: EQMRECLRSL KQAHKEDDAK VKRAFQTLLT YMGNVAKNPD EEKFRKIRLT NQTFQERVGS LRGGIEFMEL CGFEKIEGGE FLFLPRDKID SAIINSAGTE
401: LNSAINNPFF GVL
101: EAAEEMVVPD VDNNILEELE AMGFPKARAT RALHYSGNAS LEAAVNWVVE HENDPDVDEM PKVPSNSNVG PAKPALTPEE VKLKAQELRE RARKKKEEEE
201: KRMEREREKE RIRIGKELLE AKRMEEVNER KRLMFLRKAE KEEEKRAREK IRQKLEEDKA ERRRKLGLPP EDPATAAAKP SVPVVEEKKV TLPIRPATKT
301: EQMRECLRSL KQAHKEDDAK VKRAFQTLLT YMGNVAKNPD EEKFRKIRLT NQTFQERVGS LRGGIEFMEL CGFEKIEGGE FLFLPRDKID SAIINSAGTE
401: LNSAINNPFF GVL
Arabidopsis Description
F13M7.16 protein [Source:UniProtKB/TrEMBL;Acc:Q9MAT3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.