CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049805_P001	Maize	cytosol	82.76	88.89
TraesCS7D01G258300.1	Wheat	cytosol	79.02	79.02
TraesCS7B01G154400.1	Wheat	cytosol	77.87	78.1
TraesCS7A01G257500.2	Wheat	cytosol	80.46	72.73
GSMUA_Achr11P...	Banana	cytosol	14.37	48.54
Os08t0526700-00	Rice	plasma membrane	25.86	46.15
KRH42800	Soybean	endoplasmic reticulum	44.83	37.59
KRH58887	Soybean	endoplasmic reticulum	44.54	37.35
VIT_05s0029g01370.t01	Wine grape	nucleus	43.97	37.05
AT1G04850.1	Thale cress	cytosol	43.39	36.56
EES05114	Sorghum	cytosol	43.39	36.3
CDX86603	Canola	nucleus	42.53	36.27
CDY18265	Canola	nucleus	43.1	36.14
CDY15524	Canola	nucleus	42.53	35.66
Bra030592.1-P	Field mustard	nucleus	42.24	35.51
Solyc12g098420.1.1	Tomato	cytosol	42.53	35.49
PGSC0003DMT400011617	Potato	nucleus	42.24	35.17
PGSC0003DMT400067909	Potato	nucleus	19.83	28.16
Solyc09g092040.2.1	Tomato	cytosol	19.25	27.02

Protein Annotations

Gene3D:1.10.8.10	Gene3D:1.20.58.2190	MapMan:35.2	UniProt:C5YI36	ncoils:Coil	EnsemblPlants:EES14200
ProteinID:EES14200	ProteinID:EES14200.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005886
GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009926
GO:GO:0009987	GO:GO:0010252	GO:GO:0010315	GO:GO:0010329	GO:GO:0016020	InterPro:IPR015940
PFAM:PF00627	PFAM:PF09409	PFscan:PS50030	PANTHER:PTHR13020	PANTHER:PTHR13020:SF33	InterPro:PUB-like_dom_sf
InterPro:PUB_domain	SMART:SM00165	SMART:SM00580	EnsemblPlantsGene:SORBI_3007G196300	SUPFAM:SSF143503	SUPFAM:SSF46934
InterPro:UBA	InterPro:UBA-like_sf	UniParc:UPI00081ABAAB	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:62814795..62820458

Molecular Weight (calculated)

40016.7 Da

IEP (calculated)

7.515

GRAVY (calculated)

-0.866

Length

348 amino acids

Sequence
(BLAST)

001: MAVPQVDKKM LGELEAMGFP TARSVRALHF SGNSNLESAV NWLLEHESDP DIDQLPLVPR EISIECGDTS NEVRNDVQET RDTVLEQKPE EQTETGRQNE
101: TSQLEREPNA DEQEEQDTKR ILALYKQKRD EEGRARGRIR NQLQEDQRER IRAAKDLMEA KRTLEENQRK RMMESRIADQ EEEKRARERI RQRIADDKAE
201: RRRRLGLPLE SPRASAAVIT PTKVKPVERV VTSEQLRDRL RTLKKNHKDD PAAVARAYQI LLKIVANIVK NPEEEKFRRI RLSNPVFKDR VGSLQGGVEF
301: LELCGFQRLS GIGYLVMPRD KIDMALLNAA GVEIASAMEN PYFGLLSK

Best Arabidopsis Sequence Match ( AT1G04850.1 )
(BLAST)

001: MAGVSLKCGD CGTLLKSVEE AQEHAELTSH SNFAESTEAV LNLVCTTCTK PCRSKIESDL HTKRTGHTEF VDKTLETIKP ISLEAPKVAM EIDDNASGSG
101: EAAEEMVVPD VDNNILEELE AMGFPKARAT RALHYSGNAS LEAAVNWVVE HENDPDVDEM PKVPSNSNVG PAKPALTPEE VKLKAQELRE RARKKKEEEE
201: KRMEREREKE RIRIGKELLE AKRMEEVNER KRLMFLRKAE KEEEKRAREK IRQKLEEDKA ERRRKLGLPP EDPATAAAKP SVPVVEEKKV TLPIRPATKT
301: EQMRECLRSL KQAHKEDDAK VKRAFQTLLT YMGNVAKNPD EEKFRKIRLT NQTFQERVGS LRGGIEFMEL CGFEKIEGGE FLFLPRDKID SAIINSAGTE
401: LNSAINNPFF GVL

Arabidopsis Description

F13M7.16 protein [Source:UniProtKB/TrEMBL;Acc:Q9MAT3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.