Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045174_P001 | Maize | plastid | 71.43 | 96.77 |
| Zm00001d037479_P001 | Maize | mitochondrion, nucleus | 70.24 | 95.16 |
| Zm00001d018410_P001 | Maize | plastid | 70.24 | 95.16 |
| TraesCS7D01G132800.1 | Wheat | nucleus | 55.95 | 94.0 |
| TraesCS6D01G356300.1 | Wheat | nucleus | 54.76 | 93.88 |
| TraesCS6B01G410000.1 | Wheat | nucleus | 54.76 | 93.88 |
| AT4G29390.1 | Thale cress | mitochondrion, nucleus | 67.86 | 91.94 |
| TraesCS7B01G034200.1 | Wheat | golgi | 67.86 | 91.94 |
| AT2G19750.1 | Thale cress | mitochondrion, nucleus | 67.86 | 91.94 |
| AT5G56670.1 | Thale cress | mitochondrion, nucleus | 67.86 | 91.94 |
| TraesCS6A01G372200.1 | Wheat | nucleus | 51.19 | 91.49 |
| CDY21649 | Canola | mitochondrion, nucleus | 67.86 | 90.48 |
| CDX82719 | Canola | cytosol, mitochondrion | 67.86 | 86.36 |
| CDX81943 | Canola | plastid | 72.62 | 80.26 |
| CDY35885 | Canola | cytosol | 73.81 | 73.81 |
| CDY06811 | Canola | cytosol | 69.05 | 73.42 |
| CDX88582 | Canola | nucleus, plastid | 69.05 | 67.44 |
| HORVU7Hr1G027760.1 | Barley | plastid | 69.05 | 63.04 |
| CDY32875 | Canola | nucleus, plastid | 67.86 | 61.96 |
| CDY32767 | Canola | mitochondrion, plastid | 67.86 | 58.16 |
| CDY53992 | Canola | mitochondrion, plastid | 67.86 | 58.16 |
| CDY42211 | Canola | mitochondrion, plastid | 67.86 | 58.16 |
| CDY43497 | Canola | nucleus | 67.86 | 57.0 |
| KRH77363 | Soybean | mitochondrion, nucleus | 70.24 | 56.73 |
| CDY41797 | Canola | plastid | 69.05 | 53.21 |
| CDY20713 | Canola | nucleus | 70.24 | 50.43 |
Protein Annotations
| MapMan:17.1.3.1.32 | UniProt:A0A1D6QBW9 | ProteinID:AQK55732.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030529 |
| PFAM:PF04758 | PANTHER:PTHR12650 | PANTHER:PTHR12650:SF15 | InterPro:Ribosomal_S30 | SignalP:SignalP-noTM | UniParc:UPI000844430A |
| EnsemblPlantsGene:Zm00001d052003 | EnsemblPlants:Zm00001d052003_P002 | EnsemblPlants:Zm00001d052003_T002 | SEG:seg | : | : |
Description
40S ribosomal protein S30
Coordinates
chr4:+:176261187..176261890
Molecular Weight (calculated)
9299.5 Da
IEP (calculated)
11.921
GRAVY (calculated)
-0.776
Length
84 amino acids
Sequence
(BLAST)
(BLAST)
1: MGNDLLVLLS ISSCVQVQPA NSCRKVHGSL ARAGKVRGQT PKVAKQDKKK KPRGRAYKRM QYNRRFVTAV VGFGKKRGPN SSEK
1: MGKVHGSLAR AGKVRGQTPK VAKQDKKKKP RGRAHKRLQH NRRFVTAVVG FGKKRGPNSS EK
Arabidopsis Description
RPS30A40S ribosomal protein S30 [Source:UniProtKB/Swiss-Prot;Acc:P49689]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.